RNA–Protein interactions for RNA: ENST00000420303.2

AL390840.1-201, humanhuman

BASIC

Gene AL390840.1, Length 988 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390840.1-201ENST00000420303 AEBP2Q6ZN18 517 aaPredicted RBP23.35■■□□□ 1.33
AL390840.1-201ENST00000420303 CHIC1Q5VXU3 224 aa22.37■■□□□ 1.17
AL390840.1-201ENST00000420303 SENP3Q9H4L4 574 aaPredicted RBP19.76■□□□□ 0.75
AL390840.1-201ENST00000420303 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
AL390840.1-201ENST00000420303 FOXD1Q16676 465 aa18.46■□□□□ 0.55
AL390840.1-201ENST00000420303 PLPPR3Q6T4P5 718 aa17.97■□□□□ 0.47
AL390840.1-201ENST00000420303 NISCHQ9Y2I1 1504 aa17.55■□□□□ 0.4
AL390840.1-201ENST00000420303 PPP6R1Q9UPN7 881 aa17.52■□□□□ 0.4
AL390840.1-201ENST00000420303 ADRA2BP18089 450 aa17.48■□□□□ 0.39
AL390840.1-201ENST00000420303 PIAS4Q8N2W9 510 aaPredicted RBP17.31■□□□□ 0.36
AL390840.1-201ENST00000420303 MSH5O43196 834 aa17.07■□□□□ 0.32
AL390840.1-201ENST00000420303 POTEDQ86YR6 584 aa16.26■□□□□ 0.19
AL390840.1-201ENST00000420303 MAPK8IP2Q13387 824 aaPredicted RBP15.99■□□□□ 0.15
AL390840.1-201ENST00000420303 SCAF1Q9H7N4 1312 aaKnown RBP15.85■□□□□ 0.13
AL390840.1-201ENST00000420303 PPP4R3CPQ6ZMV5 832 aa15.84■□□□□ 0.13
AL390840.1-201ENST00000420303 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
AL390840.1-201ENST00000420303 CCDC180Q9P1Z9 1646 aa15.46■□□□□ 0.07
AL390840.1-201ENST00000420303 CNKSR2Q8WXI2 1034 aa15.43■□□□□ 0.06
AL390840.1-201ENST00000420303 HOXD11P31277 338 aaPredicted RBP15.26■□□□□ 0.03
AL390840.1-201ENST00000420303 NCBP3Q53F19 620 aaKnown RBP15.25■□□□□ 0.03
AL390840.1-201ENST00000420303 RNF216Q9NWF9 866 aaPredicted RBP15.21■□□□□ 0.03
AL390840.1-201ENST00000420303 DCAF8L1A6NGE4 600 aa15.14■□□□□ 0.01
AL390840.1-201ENST00000420303 NPM3O75607 178 aaKnown RBP15.12■□□□□ 0.01
AL390840.1-201ENST00000420303 KCNA4P22459 653 aa15.12■□□□□ 0.01
AL390840.1-201ENST00000420303 ABCC9O60706 1549 aa15.09■□□□□ 0.01
AL390840.1-201ENST00000420303 DCAF8L2P0C7V8 631 aa14.72□□□□□ -0.05
AL390840.1-201ENST00000420303 RNF39Q9H2S5 420 aa14.64□□□□□ -0.07
AL390840.1-201ENST00000420303 NACADO15069 1562 aa14.62□□□□□ -0.07
AL390840.1-201ENST00000420303 MYO15BQ96JP2 1530 aa14.61□□□□□ -0.07
AL390840.1-201ENST00000420303 ZCCHC6Q5VYS8 1495 aaKnown RBP14.6□□□□□ -0.07
AL390840.1-201ENST00000420303 DNAJC5BQ9UF47 199 aa14.59□□□□□ -0.07
AL390840.1-201ENST00000420303 RB1CC1Q8TDY2 1594 aa14.58□□□□□ -0.08
AL390840.1-201ENST00000420303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.57□□□□□ -0.08
AL390840.1-201ENST00000420303 DCAF1Q9Y4B6 1507 aa14.56□□□□□ -0.08
AL390840.1-201ENST00000420303 CACNB1Q02641 598 aaPredicted RBP14.54□□□□□ -0.08
AL390840.1-201ENST00000420303 C1QBPQ07021 282 aaKnown RBP14.39□□□□□ -0.11
AL390840.1-201ENST00000420303 SLC4A2P04920 1241 aa14.38□□□□□ -0.11
AL390840.1-201ENST00000420303 U3KPZ7 1027 aaPredicted RBP14.33□□□□□ -0.12
AL390840.1-201ENST00000420303 SLC4A1APQ9BWU0 796 aaKnown RBP14.29□□□□□ -0.12
AL390840.1-201ENST00000420303 PABPN1Q86U42 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
AL390840.1-201ENST00000420303 SCRIBQ14160 1630 aa14.08□□□□□ -0.15
AL390840.1-201ENST00000420303 BICRAQ9NZM4 1560 aa14.08□□□□□ -0.16
AL390840.1-201ENST00000420303 SPINK5Q9NQ38 1064 aaPredicted RBP14.06□□□□□ -0.16
AL390840.1-201ENST00000420303 SHROOM4Q9ULL8 1493 aa14.06□□□□□ -0.16
AL390840.1-201ENST00000420303 UNC13AQ9UPW8 1703 aa14.05□□□□□ -0.16
AL390840.1-201ENST00000420303 CAPN15O75808 1086 aa13.99□□□□□ -0.17
AL390840.1-201ENST00000420303 FOXD4L1Q9NU39 408 aa13.95□□□□□ -0.18
AL390840.1-201ENST00000420303 ZBTB22O15209 634 aa13.93□□□□□ -0.18
AL390840.1-201ENST00000420303 MYCNP04198 464 aaPredicted RBP13.92□□□□□ -0.18
AL390840.1-201ENST00000420303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.89□□□□□ -0.19
AL390840.1-201ENST00000420303 HNRNPUL2Q1KMD3 747 aaKnown RBP13.89□□□□□ -0.19
AL390840.1-201ENST00000420303 SAMD1Q6SPF0 538 aaPredicted RBP13.86□□□□□ -0.19
AL390840.1-201ENST00000420303 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
AL390840.1-201ENST00000420303 DSG3P32926 999 aa13.82□□□□□ -0.2
AL390840.1-201ENST00000420303 APLP2Q06481 763 aa13.81□□□□□ -0.2
AL390840.1-201ENST00000420303 ABCB7O75027 752 aa13.75□□□□□ -0.21
AL390840.1-201ENST00000420303 ZNF219Q9P2Y4 722 aaPredicted RBP13.74□□□□□ -0.21
AL390840.1-201ENST00000420303 EIF4G1Q04637 1599 aaKnown RBP13.72□□□□□ -0.21
AL390840.1-201ENST00000420303 ATF5Q9Y2D1 282 aaPredicted RBP13.68□□□□□ -0.22
AL390840.1-201ENST00000420303 CECR2Q9BXF3 1484 aa13.63□□□□□ -0.23
AL390840.1-201ENST00000420303 CC2D2AQ9P2K1 1620 aa13.62□□□□□ -0.23
AL390840.1-201ENST00000420303 BAZ1AQ9NRL2 1556 aaPredicted RBP13.59□□□□□ -0.23
AL390840.1-201ENST00000420303 EHMT2Q96KQ7 1210 aa13.55□□□□□ -0.24
AL390840.1-201ENST00000420303 NCAPD3P42695 1498 aa13.55□□□□□ -0.24
AL390840.1-201ENST00000420303 POLA2Q14181 598 aa13.52□□□□□ -0.25
AL390840.1-201ENST00000420303 SMARCA4P51532 1647 aa13.52□□□□□ -0.25
AL390840.1-201ENST00000420303 ATAD2BQ9ULI0 1458 aa13.51□□□□□ -0.25
AL390840.1-201ENST00000420303 CSRNP3Q8WYN3 585 aa13.51□□□□□ -0.25
AL390840.1-201ENST00000420303 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
AL390840.1-201ENST00000420303 MROH2BQ7Z745 1585 aa13.49□□□□□ -0.25
AL390840.1-201ENST00000420303 PEG3Q9GZU2 1588 aa13.45□□□□□ -0.26
AL390840.1-201ENST00000420303 RSF1Q96T23 1441 aaPredicted RBP13.44□□□□□ -0.26
AL390840.1-201ENST00000420303 ATXN8OSP0DMR3 200 aa13.42□□□□□ -0.26
AL390840.1-201ENST00000420303 HMGXB3Q12766 1538 aa13.39□□□□□ -0.27
AL390840.1-201ENST00000420303 BAZ1BQ9UIG0 1483 aaKnown RBP13.39□□□□□ -0.27
AL390840.1-201ENST00000420303 WIZO95785 1651 aa13.28□□□□□ -0.28
AL390840.1-201ENST00000420303 TOP2AP11388 1531 aaKnown RBP13.2□□□□□ -0.3
AL390840.1-201ENST00000420303 SUPT5HO00267 1087 aaKnown RBP13.2□□□□□ -0.3
AL390840.1-201ENST00000420303 ZBTB12Q9Y330 459 aaPredicted RBP13.17□□□□□ -0.3
AL390840.1-201ENST00000420303 CADPSQ9ULU8 1353 aa13.17□□□□□ -0.3
AL390840.1-201ENST00000420303 OSCARQ8IYS5 282 aa13.12□□□□□ -0.31
AL390840.1-201ENST00000420303 CCDC88BA6NC98 1476 aa13.1□□□□□ -0.31
AL390840.1-201ENST00000420303 RBM42Q9BTD8 480 aaKnown RBP13.1□□□□□ -0.31
AL390840.1-201ENST00000420303 PDS5BQ9NTI5 1447 aa13.09□□□□□ -0.31
AL390840.1-201ENST00000420303 LAMC3Q9Y6N6 1575 aa13.09□□□□□ -0.31
AL390840.1-201ENST00000420303 CFTRP13569 1480 aa13.07□□□□□ -0.32
AL390840.1-201ENST00000420303 NESP48681 1621 aa13.06□□□□□ -0.32
AL390840.1-201ENST00000420303 MKRN4PQ13434 485 aaPredicted RBP13.05□□□□□ -0.32
AL390840.1-201ENST00000420303 ERCC6Q03468 1493 aa13.03□□□□□ -0.32
AL390840.1-201ENST00000420303 FBLN2P98095 1184 aa13.02□□□□□ -0.33
AL390840.1-201ENST00000420303 FANCD2Q9BXW9 1451 aa12.94□□□□□ -0.34
AL390840.1-201ENST00000420303 CEP164Q9UPV0 1460 aa12.9□□□□□ -0.34
AL390840.1-201ENST00000420303 AKT1S1Q96B36 256 aa12.89□□□□□ -0.35
AL390840.1-201ENST00000420303 CUX2O14529 1486 aa12.89□□□□□ -0.35
AL390840.1-201ENST00000420303 MRC2Q9UBG0 1479 aa12.86□□□□□ -0.35
AL390840.1-201ENST00000420303 ABCC8Q09428 1581 aa12.83□□□□□ -0.36
AL390840.1-201ENST00000420303 SPDYE2BA6NHP3 402 aa12.82□□□□□ -0.36
AL390840.1-201ENST00000420303 SPDYE6P0CI01 402 aa12.82□□□□□ -0.36
AL390840.1-201ENST00000420303 SPDYE2Q495Y8 402 aa12.82□□□□□ -0.36
AL390840.1-201ENST00000420303 REM2Q8IYK8 340 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms