RNA–Protein interactions for RNA: ENST00000552639.1

AC087897.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC087897.2, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087897.2-201ENST00000552639 AEBP2Q6ZN18 517 aaPredicted RBP24.05■■□□□ 1.44
AC087897.2-201ENST00000552639 CHIC1Q5VXU3 224 aa22.52■■□□□ 1.2
AC087897.2-201ENST00000552639 SENP3Q9H4L4 574 aaPredicted RBP20.41■□□□□ 0.86
AC087897.2-201ENST00000552639 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
AC087897.2-201ENST00000552639 FOXD1Q16676 465 aa19.2■□□□□ 0.66
AC087897.2-201ENST00000552639 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
AC087897.2-201ENST00000552639 POTEDQ86YR6 584 aa18.42■□□□□ 0.54
AC087897.2-201ENST00000552639 MSH5O43196 834 aa17.98■□□□□ 0.47
AC087897.2-201ENST00000552639 PIAS4Q8N2W9 510 aaPredicted RBP17.78■□□□□ 0.44
AC087897.2-201ENST00000552639 PPP6R1Q9UPN7 881 aa17.68■□□□□ 0.42
AC087897.2-201ENST00000552639 ADRA2BP18089 450 aa17.58■□□□□ 0.4
AC087897.2-201ENST00000552639 KCNA4P22459 653 aa16.41■□□□□ 0.22
AC087897.2-201ENST00000552639 PPP4R3CPQ6ZMV5 832 aa16.33■□□□□ 0.2
AC087897.2-201ENST00000552639 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
AC087897.2-201ENST00000552639 DMRT2Q9Y5R5 561 aa16.16■□□□□ 0.18
AC087897.2-201ENST00000552639 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
AC087897.2-201ENST00000552639 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
AC087897.2-201ENST00000552639 CNKSR2Q8WXI2 1034 aa15.8■□□□□ 0.12
AC087897.2-201ENST00000552639 NPM3O75607 178 aaKnown RBP15.79■□□□□ 0.12
AC087897.2-201ENST00000552639 CACNB1Q02641 598 aaPredicted RBP15.76■□□□□ 0.11
AC087897.2-201ENST00000552639 EHMT2Q96KQ7 1210 aa15.74■□□□□ 0.11
AC087897.2-201ENST00000552639 SLC4A1APQ9BWU0 796 aaKnown RBP15.73■□□□□ 0.11
AC087897.2-201ENST00000552639 DCAF8L1A6NGE4 600 aa15.54■□□□□ 0.08
AC087897.2-201ENST00000552639 HOXD11P31277 338 aaPredicted RBP15.4■□□□□ 0.06
AC087897.2-201ENST00000552639 CSRNP3Q8WYN3 585 aa15.39■□□□□ 0.05
AC087897.2-201ENST00000552639 RNF216Q9NWF9 866 aaPredicted RBP15.39■□□□□ 0.05
AC087897.2-201ENST00000552639 RNF39Q9H2S5 420 aa15.38■□□□□ 0.05
AC087897.2-201ENST00000552639 DNAJC5BQ9UF47 199 aa15.33■□□□□ 0.04
AC087897.2-201ENST00000552639 ZBTB22O15209 634 aa15.1■□□□□ 0.01
AC087897.2-201ENST00000552639 C1QBPQ07021 282 aaKnown RBP15.06■□□□□ 0
AC087897.2-201ENST00000552639 FOXD4L1Q9NU39 408 aa15.01□□□□□ -0.01
AC087897.2-201ENST00000552639 SLC4A2P04920 1241 aa14.79□□□□□ -0.04
AC087897.2-201ENST00000552639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.64□□□□□ -0.07
AC087897.2-201ENST00000552639 MYCNP04198 464 aaPredicted RBP14.6□□□□□ -0.07
AC087897.2-201ENST00000552639 ATXN8OSP0DMR3 200 aa14.48□□□□□ -0.09
AC087897.2-201ENST00000552639 U3KPZ7 1027 aaPredicted RBP14.37□□□□□ -0.11
AC087897.2-201ENST00000552639 SPINK5Q9NQ38 1064 aaPredicted RBP14.33□□□□□ -0.12
AC087897.2-201ENST00000552639 POTEHQ6S545 545 aa14.31□□□□□ -0.12
AC087897.2-201ENST00000552639 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.3□□□□□ -0.12
AC087897.2-201ENST00000552639 HNRNPUL2Q1KMD3 747 aaKnown RBP14.3□□□□□ -0.12
AC087897.2-201ENST00000552639 DSG3P32926 999 aa14.29□□□□□ -0.12
AC087897.2-201ENST00000552639 SAMD1Q6SPF0 538 aaPredicted RBP14.26□□□□□ -0.13
AC087897.2-201ENST00000552639 CAPN15O75808 1086 aa14.24□□□□□ -0.13
AC087897.2-201ENST00000552639 ATF5Q9Y2D1 282 aaPredicted RBP14.13□□□□□ -0.15
AC087897.2-201ENST00000552639 APLP2Q06481 763 aa14.05□□□□□ -0.16
AC087897.2-201ENST00000552639 ABCB7O75027 752 aa13.93□□□□□ -0.18
AC087897.2-201ENST00000552639 TRHP20396 242 aaPredicted RBP13.93□□□□□ -0.18
AC087897.2-201ENST00000552639 ZNF219Q9P2Y4 722 aaPredicted RBP13.9□□□□□ -0.18
AC087897.2-201ENST00000552639 FKBP8Q14318 412 aa13.87□□□□□ -0.19
AC087897.2-201ENST00000552639 POLA2Q14181 598 aa13.6□□□□□ -0.23
AC087897.2-201ENST00000552639 FBLN2P98095 1184 aa13.56□□□□□ -0.24
AC087897.2-201ENST00000552639 MKRN4PQ13434 485 aaPredicted RBP13.55□□□□□ -0.24
AC087897.2-201ENST00000552639 RBM42Q9BTD8 480 aaKnown RBP13.51□□□□□ -0.25
AC087897.2-201ENST00000552639 CHRDL2Q6WN34 429 aa13.48□□□□□ -0.25
AC087897.2-201ENST00000552639 SPDYE4A6NLX3 237 aa13.47□□□□□ -0.25
AC087897.2-201ENST00000552639 ZBTB12Q9Y330 459 aaPredicted RBP13.46□□□□□ -0.25
AC087897.2-201ENST00000552639 AMER1Q5JTC6 1135 aaPredicted RBP13.43□□□□□ -0.26
AC087897.2-201ENST00000552639 RTN4Q9NQC3 1192 aaKnown RBP13.36□□□□□ -0.27
AC087897.2-201ENST00000552639 PROM2Q8N271 834 aa13.33□□□□□ -0.28
AC087897.2-201ENST00000552639 FBXO3Q9UK99 471 aa13.31□□□□□ -0.28
AC087897.2-201ENST00000552639 SP7Q8TDD2 431 aaPredicted RBP13.2□□□□□ -0.3
AC087897.2-201ENST00000552639 AKT1S1Q96B36 256 aa13.16□□□□□ -0.3
AC087897.2-201ENST00000552639 SPDYE2BA6NHP3 402 aa13.11□□□□□ -0.31
AC087897.2-201ENST00000552639 SPDYE6P0CI01 402 aa13.11□□□□□ -0.31
AC087897.2-201ENST00000552639 SPDYE2Q495Y8 402 aa13.11□□□□□ -0.31
AC087897.2-201ENST00000552639 ZNF692Q9BU19 519 aaPredicted RBP13.11□□□□□ -0.31
AC087897.2-201ENST00000552639 REM2Q8IYK8 340 aaPredicted RBP13.1□□□□□ -0.31
AC087897.2-201ENST00000552639 OSCARQ8IYS5 282 aa13.1□□□□□ -0.31
AC087897.2-201ENST00000552639 PIP4P2Q8N4L2 257 aa13.1□□□□□ -0.31
AC087897.2-201ENST00000552639 VASPP50552 380 aaPredicted RBP13.09□□□□□ -0.31
AC087897.2-201ENST00000552639 SSUH2Q9Y2M2 353 aa13.04□□□□□ -0.32
AC087897.2-201ENST00000552639 PITPNM1O00562 1244 aa12.98□□□□□ -0.33
AC087897.2-201ENST00000552639 HAX1O00165 279 aa12.96□□□□□ -0.33
AC087897.2-201ENST00000552639 PABPN1Q86U42 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
AC087897.2-201ENST00000552639 IFNLR1Q8IU57 520 aaPredicted RBP12.94□□□□□ -0.34
AC087897.2-201ENST00000552639 FXR2P51116 673 aaKnown RBP eCLIP12.93□□□□□ -0.34
AC087897.2-201ENST00000552639 STAG3Q9UJ98 1225 aa12.92□□□□□ -0.34
AC087897.2-201ENST00000552639 EVX2Q03828 476 aa12.89□□□□□ -0.35
AC087897.2-201ENST00000552639 SLC24A1O60721 1099 aa12.78□□□□□ -0.36
AC087897.2-201ENST00000552639 KLHL34Q8N239 644 aa12.77□□□□□ -0.37
AC087897.2-201ENST00000552639 PLCD3Q8N3E9 789 aa12.76□□□□□ -0.37
AC087897.2-201ENST00000552639 MIER1Q8N108 512 aa12.74□□□□□ -0.37
AC087897.2-201ENST00000552639 SPOCK2Q92563 424 aa12.73□□□□□ -0.37
AC087897.2-201ENST00000552639 PLEKHG5O94827 1062 aa12.67□□□□□ -0.38
AC087897.2-201ENST00000552639 PKD2Q13563 968 aa12.67□□□□□ -0.38
AC087897.2-201ENST00000552639 ZBTB47Q9UFB7 747 aaPredicted RBP12.63□□□□□ -0.39
AC087897.2-201ENST00000552639 PRKAR2AP13861 404 aaKnown RBP12.62□□□□□ -0.39
AC087897.2-201ENST00000552639 SPDYE1Q8NFV5 336 aaPredicted RBP12.62□□□□□ -0.39
AC087897.2-201ENST00000552639 CLEC11AQ9Y240 323 aa12.59□□□□□ -0.39
AC087897.2-201ENST00000552639 C19orf67A6NJJ6 358 aa12.53□□□□□ -0.4
AC087897.2-201ENST00000552639 ECM2O94769 699 aaPredicted RBP12.52□□□□□ -0.41
AC087897.2-201ENST00000552639 DCAF8L2P0C7V8 631 aa12.52□□□□□ -0.41
AC087897.2-201ENST00000552639 GABBR2O75899 941 aa12.48□□□□□ -0.41
AC087897.2-201ENST00000552639 PRR29P0C7W0 189 aa12.48□□□□□ -0.41
AC087897.2-201ENST00000552639 CHADLQ6NUI6 762 aa12.47□□□□□ -0.41
AC087897.2-201ENST00000552639 CIZ1Q9ULV3 898 aaPredicted RBP12.44□□□□□ -0.42
AC087897.2-201ENST00000552639 PLCB2Q00722 1185 aa12.4□□□□□ -0.42
AC087897.2-201ENST00000552639 CREBZFQ9NS37 354 aa12.4□□□□□ -0.42
AC087897.2-201ENST00000552639 LHX8Q68G74 356 aa12.39□□□□□ -0.43
AC087897.2-201ENST00000552639 TRIM41Q8WV44 630 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms