RNA–Protein interactions for RNA: ENST00000543144.1

NDFIP1P1-201, Transcript of Nedd4 family interacting protein 1 pseudogene 1, humanhuman

BASIC

Gene NDFIP1P1, Length 525 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1P1-201ENST00000543144 AEBP2Q6ZN18 517 aaPredicted RBP20.11■□□□□ 0.81
NDFIP1P1-201ENST00000543144 CHIC1Q5VXU3 224 aa18.99■□□□□ 0.63
NDFIP1P1-201ENST00000543144 NISCHQ9Y2I1 1504 aa18.08■□□□□ 0.48
NDFIP1P1-201ENST00000543144 SENP3Q9H4L4 574 aaPredicted RBP17.22■□□□□ 0.35
NDFIP1P1-201ENST00000543144 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
NDFIP1P1-201ENST00000543144 POTEDQ86YR6 584 aa16.58■□□□□ 0.24
NDFIP1P1-201ENST00000543144 FOXD1Q16676 465 aa16.2■□□□□ 0.18
NDFIP1P1-201ENST00000543144 CCDC180Q9P1Z9 1646 aa15.98■□□□□ 0.15
NDFIP1P1-201ENST00000543144 PLPPR3Q6T4P5 718 aa15.79■□□□□ 0.12
NDFIP1P1-201ENST00000543144 MSH5O43196 834 aa15.43■□□□□ 0.06
NDFIP1P1-201ENST00000543144 ABCC9O60706 1549 aa15.26■□□□□ 0.03
NDFIP1P1-201ENST00000543144 ZCCHC6Q5VYS8 1495 aaKnown RBP15.13■□□□□ 0.01
NDFIP1P1-201ENST00000543144 DCAF1Q9Y4B6 1507 aa15.03■□□□□ -0
NDFIP1P1-201ENST00000543144 MYO15BQ96JP2 1530 aa15.01□□□□□ -0.01
NDFIP1P1-201ENST00000543144 NACADO15069 1562 aa14.95□□□□□ -0.02
NDFIP1P1-201ENST00000543144 PIAS4Q8N2W9 510 aaPredicted RBP14.91□□□□□ -0.02
NDFIP1P1-201ENST00000543144 DCAF8L2P0C7V8 631 aa14.89□□□□□ -0.03
NDFIP1P1-201ENST00000543144 RB1CC1Q8TDY2 1594 aa14.89□□□□□ -0.03
NDFIP1P1-201ENST00000543144 ADRA2BP18089 450 aa14.72□□□□□ -0.05
NDFIP1P1-201ENST00000543144 KCNA4P22459 653 aa14.68□□□□□ -0.06
NDFIP1P1-201ENST00000543144 EHMT2Q96KQ7 1210 aa14.68□□□□□ -0.06
NDFIP1P1-201ENST00000543144 SCRIBQ14160 1630 aa14.52□□□□□ -0.09
NDFIP1P1-201ENST00000543144 UNC13AQ9UPW8 1703 aa14.5□□□□□ -0.09
NDFIP1P1-201ENST00000543144 PPP6R1Q9UPN7 881 aa14.5□□□□□ -0.09
NDFIP1P1-201ENST00000543144 BICRAQ9NZM4 1560 aa14.39□□□□□ -0.11
NDFIP1P1-201ENST00000543144 SHROOM4Q9ULL8 1493 aa14.37□□□□□ -0.11
NDFIP1P1-201ENST00000543144 PABPN1Q86U42 306 aaKnown RBP eCLIP14.28□□□□□ -0.12
NDFIP1P1-201ENST00000543144 CSRNP3Q8WYN3 585 aa14.17□□□□□ -0.14
NDFIP1P1-201ENST00000543144 SLC4A1APQ9BWU0 796 aaKnown RBP14.12□□□□□ -0.15
NDFIP1P1-201ENST00000543144 BAZ1AQ9NRL2 1556 aaPredicted RBP14.01□□□□□ -0.17
NDFIP1P1-201ENST00000543144 PPP4R3CPQ6ZMV5 832 aa14□□□□□ -0.17
NDFIP1P1-201ENST00000543144 EIF4G1Q04637 1599 aaKnown RBP14□□□□□ -0.17
NDFIP1P1-201ENST00000543144 CECR2Q9BXF3 1484 aa13.99□□□□□ -0.17
NDFIP1P1-201ENST00000543144 SMARCA4P51532 1647 aa13.96□□□□□ -0.17
NDFIP1P1-201ENST00000543144 MROH2BQ7Z745 1585 aa13.9□□□□□ -0.18
NDFIP1P1-201ENST00000543144 NCBP3Q53F19 620 aaKnown RBP13.88□□□□□ -0.19
NDFIP1P1-201ENST00000543144 RSF1Q96T23 1441 aaPredicted RBP13.87□□□□□ -0.19
NDFIP1P1-201ENST00000543144 PEG3Q9GZU2 1588 aa13.87□□□□□ -0.19
NDFIP1P1-201ENST00000543144 CC2D2AQ9P2K1 1620 aa13.85□□□□□ -0.19
NDFIP1P1-201ENST00000543144 SMARCA2P51531 1590 aa13.83□□□□□ -0.19
NDFIP1P1-201ENST00000543144 ATAD2BQ9ULI0 1458 aa13.8□□□□□ -0.2
NDFIP1P1-201ENST00000543144 NCAPD3P42695 1498 aa13.79□□□□□ -0.2
NDFIP1P1-201ENST00000543144 CACNB1Q02641 598 aaPredicted RBP13.78□□□□□ -0.2
NDFIP1P1-201ENST00000543144 WIZO95785 1651 aa13.75□□□□□ -0.21
NDFIP1P1-201ENST00000543144 HMGXB3Q12766 1538 aa13.75□□□□□ -0.21
NDFIP1P1-201ENST00000543144 NPM3O75607 178 aaKnown RBP13.71□□□□□ -0.21
NDFIP1P1-201ENST00000543144 BAZ1BQ9UIG0 1483 aaKnown RBP13.71□□□□□ -0.21
NDFIP1P1-201ENST00000543144 DNAJC5BQ9UF47 199 aa13.7□□□□□ -0.22
NDFIP1P1-201ENST00000543144 TOP2AP11388 1531 aaKnown RBP13.68□□□□□ -0.22
NDFIP1P1-201ENST00000543144 SUPT5HO00267 1087 aaKnown RBP13.67□□□□□ -0.22
NDFIP1P1-201ENST00000543144 ZBTB22O15209 634 aa13.55□□□□□ -0.24
NDFIP1P1-201ENST00000543144 DMRT2Q9Y5R5 561 aa13.54□□□□□ -0.24
NDFIP1P1-201ENST00000543144 CCDC88BA6NC98 1476 aa13.48□□□□□ -0.25
NDFIP1P1-201ENST00000543144 MAPK8IP2Q13387 824 aaPredicted RBP13.48□□□□□ -0.25
NDFIP1P1-201ENST00000543144 CNKSR2Q8WXI2 1034 aa13.43□□□□□ -0.26
NDFIP1P1-201ENST00000543144 LAMC3Q9Y6N6 1575 aa13.38□□□□□ -0.27
NDFIP1P1-201ENST00000543144 CFTRP13569 1480 aa13.37□□□□□ -0.27
NDFIP1P1-201ENST00000543144 CADPSQ9ULU8 1353 aa13.37□□□□□ -0.27
NDFIP1P1-201ENST00000543144 SLC24A1O60721 1099 aa13.32□□□□□ -0.28
NDFIP1P1-201ENST00000543144 PRDM2Q13029 1718 aa13.3□□□□□ -0.28
NDFIP1P1-201ENST00000543144 FOXD4L1Q9NU39 408 aa13.29□□□□□ -0.28
NDFIP1P1-201ENST00000543144 NESP48681 1621 aa13.28□□□□□ -0.28
NDFIP1P1-201ENST00000543144 SCAF1Q9H7N4 1312 aaKnown RBP13.27□□□□□ -0.29
NDFIP1P1-201ENST00000543144 PDS5BQ9NTI5 1447 aa13.27□□□□□ -0.29
NDFIP1P1-201ENST00000543144 FANCD2Q9BXW9 1451 aa13.21□□□□□ -0.3
NDFIP1P1-201ENST00000543144 CEP164Q9UPV0 1460 aa13.18□□□□□ -0.3
NDFIP1P1-201ENST00000543144 AMER1Q5JTC6 1135 aaPredicted RBP13.18□□□□□ -0.3
NDFIP1P1-201ENST00000543144 KIF21AQ7Z4S6 1674 aa13.16□□□□□ -0.3
NDFIP1P1-201ENST00000543144 DNAJC5Q9H3Z4 198 aa13.16□□□□□ -0.3
NDFIP1P1-201ENST00000543144 RTN4Q9NQC3 1192 aaKnown RBP13.16□□□□□ -0.3
NDFIP1P1-201ENST00000543144 ERCC6Q03468 1493 aa13.16□□□□□ -0.3
NDFIP1P1-201ENST00000543144 RNF39Q9H2S5 420 aa13.12□□□□□ -0.31
NDFIP1P1-201ENST00000543144 ABCC8Q09428 1581 aa13.11□□□□□ -0.31
NDFIP1P1-201ENST00000543144 MRC2Q9UBG0 1479 aa13.1□□□□□ -0.31
NDFIP1P1-201ENST00000543144 WRNQ14191 1432 aaPredicted RBP eCLIP13.07□□□□□ -0.32
NDFIP1P1-201ENST00000543144 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
NDFIP1P1-201ENST00000543144 WDR62O43379 1518 aa13.06□□□□□ -0.32
NDFIP1P1-201ENST00000543144 DNMBPQ6XZF7 1577 aa13.06□□□□□ -0.32
NDFIP1P1-201ENST00000543144 URB2Q14146 1524 aaKnown RBP13.04□□□□□ -0.32
NDFIP1P1-201ENST00000543144 TOPBP1Q92547 1522 aa13.03□□□□□ -0.32
NDFIP1P1-201ENST00000543144 TOP2BQ02880 1626 aa13.03□□□□□ -0.32
NDFIP1P1-201ENST00000543144 BIVM-ERCC5R4GMW8 1640 aa13.03□□□□□ -0.32
NDFIP1P1-201ENST00000543144 CUX1P39880 1505 aa13.03□□□□□ -0.32
NDFIP1P1-201ENST00000543144 DCAF8L1A6NGE4 600 aa13.01□□□□□ -0.33
NDFIP1P1-201ENST00000543144 SYNJ1O43426 1573 aa13.01□□□□□ -0.33
NDFIP1P1-201ENST00000543144 RNF216Q9NWF9 866 aaPredicted RBP12.97□□□□□ -0.33
NDFIP1P1-201ENST00000543144 CUX2O14529 1486 aa12.96□□□□□ -0.34
NDFIP1P1-201ENST00000543144 TRIM41Q8WV44 630 aa12.95□□□□□ -0.34
NDFIP1P1-201ENST00000543144 FGD5Q6ZNL6 1462 aa12.95□□□□□ -0.34
NDFIP1P1-201ENST00000543144 POLA1P09884 1462 aaPredicted RBP12.94□□□□□ -0.34
NDFIP1P1-201ENST00000543144 IFT140Q96RY7 1462 aa12.91□□□□□ -0.34
NDFIP1P1-201ENST00000543144 SOGA1O94964 1423 aa12.89□□□□□ -0.35
NDFIP1P1-201ENST00000543144 TARBP1Q13395 1621 aaKnown RBP12.88□□□□□ -0.35
NDFIP1P1-201ENST00000543144 WDR97A6NE52 1622 aa12.87□□□□□ -0.35
NDFIP1P1-201ENST00000543144 ABCA10Q8WWZ4 1543 aa12.86□□□□□ -0.35
NDFIP1P1-201ENST00000543144 C1QBPQ07021 282 aaKnown RBP12.84□□□□□ -0.35
NDFIP1P1-201ENST00000543144 RAD54L2Q9Y4B4 1467 aa12.84□□□□□ -0.35
NDFIP1P1-201ENST00000543144 POTEHQ6S545 545 aa12.81□□□□□ -0.36
NDFIP1P1-201ENST00000543144 KIF27Q86VH2 1401 aa12.79□□□□□ -0.36
NDFIP1P1-201ENST00000543144 ABCA5Q8WWZ7 1642 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms