RNA–Protein interactions for RNA: ENST00000502796.5

CDH18-203, Transcript of cadherin 18, humanhuman

TSL 2 BASIC

Gene CDH18, Length 2,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-203ENST00000502796 NISCHQ9Y2I1 1504 aa17.03■□□□□ 0.32
CDH18-203ENST00000502796 SHROOM4Q9ULL8 1493 aa14.56□□□□□ -0.08
CDH18-203ENST00000502796 ZCCHC6Q5VYS8 1495 aaKnown RBP14.47□□□□□ -0.09
CDH18-203ENST00000502796 CCDC180Q9P1Z9 1646 aa14.46□□□□□ -0.1
CDH18-203ENST00000502796 SUPT5HO00267 1087 aaKnown RBP14.36□□□□□ -0.11
CDH18-203ENST00000502796 MYO15BQ96JP2 1530 aa14.19□□□□□ -0.14
CDH18-203ENST00000502796 CHIC1Q5VXU3 224 aa14.13□□□□□ -0.15
CDH18-203ENST00000502796 HRCP23327 699 aa14.06□□□□□ -0.16
CDH18-203ENST00000502796 DCAF1Q9Y4B6 1507 aa14.02□□□□□ -0.17
CDH18-203ENST00000502796 DCAF8L2P0C7V8 631 aa13.88□□□□□ -0.19
CDH18-203ENST00000502796 PCGF6Q9BYE7 350 aa13.85□□□□□ -0.19
CDH18-203ENST00000502796 ABCC9O60706 1549 aa13.71□□□□□ -0.21
CDH18-203ENST00000502796 PPARGC1BQ86YN6 1023 aaKnown RBP13.69□□□□□ -0.22
CDH18-203ENST00000502796 LOC105371045A0A1W2PR82 267 aa13.68□□□□□ -0.22
CDH18-203ENST00000502796 TRIM26Q12899 539 aaPredicted RBP13.58□□□□□ -0.24
CDH18-203ENST00000502796 RSF1Q96T23 1441 aaPredicted RBP13.54□□□□□ -0.24
CDH18-203ENST00000502796 SCRIBQ14160 1630 aa13.5□□□□□ -0.25
CDH18-203ENST00000502796 RB1CC1Q8TDY2 1594 aa13.46□□□□□ -0.25
CDH18-203ENST00000502796 ZEB1P37275 1124 aaPredicted RBP13.38□□□□□ -0.27
CDH18-203ENST00000502796 TRIM41Q8WV44 630 aa13.37□□□□□ -0.27
CDH18-203ENST00000502796 NACADO15069 1562 aa13.26□□□□□ -0.29
CDH18-203ENST00000502796 CECR2Q9BXF3 1484 aa13.25□□□□□ -0.29
CDH18-203ENST00000502796 MROH2BQ7Z745 1585 aa13.25□□□□□ -0.29
CDH18-203ENST00000502796 FAM9AQ8IZU1 332 aaPredicted RBP13.24□□□□□ -0.29
CDH18-203ENST00000502796 WIZO95785 1651 aa13.21□□□□□ -0.29
CDH18-203ENST00000502796 EIF4G1Q04637 1599 aaKnown RBP13.19□□□□□ -0.3
CDH18-203ENST00000502796 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
CDH18-203ENST00000502796 EHMT2Q96KQ7 1210 aa13.08□□□□□ -0.32
CDH18-203ENST00000502796 SCAF1Q9H7N4 1312 aaKnown RBP13.08□□□□□ -0.32
CDH18-203ENST00000502796 PELP1Q8IZL8 1130 aaKnown RBP13.07□□□□□ -0.32
CDH18-203ENST00000502796 TOP2AP11388 1531 aaKnown RBP13□□□□□ -0.33
CDH18-203ENST00000502796 WRNQ14191 1432 aaPredicted RBP eCLIP12.99□□□□□ -0.33
CDH18-203ENST00000502796 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.96□□□□□ -0.33
CDH18-203ENST00000502796 ABCC8Q09428 1581 aa12.96□□□□□ -0.33
CDH18-203ENST00000502796 SMARCA4P51532 1647 aa12.96□□□□□ -0.34
CDH18-203ENST00000502796 SMARCA2P51531 1590 aa12.95□□□□□ -0.34
CDH18-203ENST00000502796 CCDC88BA6NC98 1476 aa12.94□□□□□ -0.34
CDH18-203ENST00000502796 CCER1Q8TC90 406 aaPredicted RBP12.93□□□□□ -0.34
CDH18-203ENST00000502796 UNC13AQ9UPW8 1703 aa12.91□□□□□ -0.34
CDH18-203ENST00000502796 CEP162Q5TB80 1403 aa12.9□□□□□ -0.34
CDH18-203ENST00000502796 ACIN1Q9UKV3 1341 aaKnown RBP12.88□□□□□ -0.35
CDH18-203ENST00000502796 TNIKQ9UKE5 1360 aa12.88□□□□□ -0.35
CDH18-203ENST00000502796 SOGA1O94964 1423 aa12.85□□□□□ -0.35
CDH18-203ENST00000502796 EEA1Q15075 1411 aa12.85□□□□□ -0.35
CDH18-203ENST00000502796 NEUROD1Q13562 356 aa12.84□□□□□ -0.35
CDH18-203ENST00000502796 DIEXFQ68CQ4 756 aaKnown RBP12.82□□□□□ -0.36
CDH18-203ENST00000502796 RUSC2Q8N2Y8 1516 aa12.79□□□□□ -0.36
CDH18-203ENST00000502796 CSRNP3Q8WYN3 585 aa12.77□□□□□ -0.36
CDH18-203ENST00000502796 GOLGA3Q08378 1498 aa12.77□□□□□ -0.37
CDH18-203ENST00000502796 CENPBP07199 599 aaPredicted RBP12.75□□□□□ -0.37
CDH18-203ENST00000502796 TTBK1Q5TCY1 1321 aaPredicted RBP12.73□□□□□ -0.37
CDH18-203ENST00000502796 KIF21BO75037 1637 aa12.72□□□□□ -0.37
CDH18-203ENST00000502796 PEG3Q9GZU2 1588 aa12.72□□□□□ -0.37
CDH18-203ENST00000502796 GTF3C3Q9Y5Q9 886 aa12.71□□□□□ -0.37
CDH18-203ENST00000502796 ZNF316A6NFI3 1004 aaPredicted RBP12.69□□□□□ -0.38
CDH18-203ENST00000502796 UBTFP17480 764 aaKnown RBP12.69□□□□□ -0.38
CDH18-203ENST00000502796 SYNJ1O43426 1573 aa12.68□□□□□ -0.38
CDH18-203ENST00000502796 CEP164Q9UPV0 1460 aa12.67□□□□□ -0.38
CDH18-203ENST00000502796 BICRAQ9NZM4 1560 aa12.67□□□□□ -0.38
CDH18-203ENST00000502796 BAZ1BQ9UIG0 1483 aaKnown RBP12.62□□□□□ -0.39
CDH18-203ENST00000502796 CLIP1P30622 1438 aa12.6□□□□□ -0.39
CDH18-203ENST00000502796 VPS8Q8N3P4 1428 aa12.6□□□□□ -0.39
CDH18-203ENST00000502796 RAPGEF2Q9Y4G8 1499 aa12.54□□□□□ -0.4
CDH18-203ENST00000502796 HNRNPUL2Q1KMD3 747 aaKnown RBP12.54□□□□□ -0.4
CDH18-203ENST00000502796 ATAD2BQ9ULI0 1458 aa12.53□□□□□ -0.4
CDH18-203ENST00000502796 MIER1Q8N108 512 aa12.52□□□□□ -0.4
CDH18-203ENST00000502796 TOP2BQ02880 1626 aa12.51□□□□□ -0.41
CDH18-203ENST00000502796 PABPN1Q86U42 306 aaKnown RBP eCLIP12.5□□□□□ -0.41
CDH18-203ENST00000502796 BIVM-ERCC5R4GMW8 1640 aa12.5□□□□□ -0.41
CDH18-203ENST00000502796 YTHDC1Q96MU7 727 aaKnown RBP12.48□□□□□ -0.41
CDH18-203ENST00000502796 MYT1Q01538 1121 aa12.47□□□□□ -0.41
CDH18-203ENST00000502796 ERICH3Q5RHP9 1530 aa12.46□□□□□ -0.41
CDH18-203ENST00000502796 APLP2Q06481 763 aa12.45□□□□□ -0.42
CDH18-203ENST00000502796 CLSPNQ9HAW4 1339 aa12.44□□□□□ -0.42
CDH18-203ENST00000502796 ARAP1Q96P48 1450 aa12.42□□□□□ -0.42
CDH18-203ENST00000502796 PRXQ9BXM0 1461 aa12.42□□□□□ -0.42
CDH18-203ENST00000502796 DHX57Q6P158 1386 aaKnown RBP12.42□□□□□ -0.42
CDH18-203ENST00000502796 RRBP1Q9P2E9 1410 aaKnown RBP12.36□□□□□ -0.43
CDH18-203ENST00000502796 CUX2O14529 1486 aa12.35□□□□□ -0.43
CDH18-203ENST00000502796 RANGAP1P46060 587 aaPredicted RBP12.34□□□□□ -0.43
CDH18-203ENST00000502796 CUX1P39880 1505 aa12.33□□□□□ -0.44
CDH18-203ENST00000502796 KANK4Q5T7N3 995 aaPredicted RBP12.32□□□□□ -0.44
CDH18-203ENST00000502796 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
CDH18-203ENST00000502796 KIF27Q86VH2 1401 aa12.28□□□□□ -0.44
CDH18-203ENST00000502796 ARHGAP35Q9NRY4 1499 aa12.27□□□□□ -0.45
CDH18-203ENST00000502796 NCAPD3P42695 1498 aa12.25□□□□□ -0.45
CDH18-203ENST00000502796 CCNB3Q8WWL7 1395 aa12.25□□□□□ -0.45
CDH18-203ENST00000502796 PRDM2Q13029 1718 aa12.25□□□□□ -0.45
CDH18-203ENST00000502796 SUPT16HQ9Y5B9 1047 aaKnown RBP12.22□□□□□ -0.45
CDH18-203ENST00000502796 CFTRP13569 1480 aa12.22□□□□□ -0.45
CDH18-203ENST00000502796 MAP3K1Q13233 1512 aa12.22□□□□□ -0.45
CDH18-203ENST00000502796 MAPKBP1O60336 1514 aa12.21□□□□□ -0.45
CDH18-203ENST00000502796 TIAM1Q13009 1591 aa12.2□□□□□ -0.46
CDH18-203ENST00000502796 RAB3GAP2Q9H2M9 1393 aa12.17□□□□□ -0.46
CDH18-203ENST00000502796 CFAP43Q8NDM7 1665 aa12.14□□□□□ -0.47
CDH18-203ENST00000502796 IGF1RP08069 1367 aa12.13□□□□□ -0.47
CDH18-203ENST00000502796 LRRC9Q6ZRR7 1453 aa12.12□□□□□ -0.47
CDH18-203ENST00000502796 SETD5Q9C0A6 1442 aa12.12□□□□□ -0.47
CDH18-203ENST00000502796 WDR97A6NE52 1622 aa12.11□□□□□ -0.47
CDH18-203ENST00000502796 ITGAEP38570 1179 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms