RNA–Protein interactions for RNA: ENST00000606778.1

AC016877.3-201, humanhuman

BASIC

Gene AC016877.3, Length 504 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016877.3-201ENST00000606778 AEBP2Q6ZN18 517 aaPredicted RBP23.04■■□□□ 1.28
AC016877.3-201ENST00000606778 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
AC016877.3-201ENST00000606778 PHF23Q9BUL5 403 aaPredicted RBP19.94■□□□□ 0.78
AC016877.3-201ENST00000606778 SENP3Q9H4L4 574 aaPredicted RBP19.47■□□□□ 0.71
AC016877.3-201ENST00000606778 PLPPR3Q6T4P5 718 aa18.41■□□□□ 0.54
AC016877.3-201ENST00000606778 FOXD1Q16676 465 aa18.1■□□□□ 0.49
AC016877.3-201ENST00000606778 PPP6R1Q9UPN7 881 aa17.56■□□□□ 0.4
AC016877.3-201ENST00000606778 ADRA2BP18089 450 aa17.55■□□□□ 0.4
AC016877.3-201ENST00000606778 PIAS4Q8N2W9 510 aaPredicted RBP17.08■□□□□ 0.32
AC016877.3-201ENST00000606778 MSH5O43196 834 aa16.58■□□□□ 0.24
AC016877.3-201ENST00000606778 POTEDQ86YR6 584 aa16.54■□□□□ 0.24
AC016877.3-201ENST00000606778 PPP4R3CPQ6ZMV5 832 aa16.27■□□□□ 0.2
AC016877.3-201ENST00000606778 KCNA4P22459 653 aa16.09■□□□□ 0.17
AC016877.3-201ENST00000606778 SCAF1Q9H7N4 1312 aaKnown RBP15.98■□□□□ 0.15
AC016877.3-201ENST00000606778 MAPK8IP2Q13387 824 aaPredicted RBP15.9■□□□□ 0.14
AC016877.3-201ENST00000606778 NCBP3Q53F19 620 aaKnown RBP15.85■□□□□ 0.13
AC016877.3-201ENST00000606778 CNKSR2Q8WXI2 1034 aa15.76■□□□□ 0.11
AC016877.3-201ENST00000606778 NPM3O75607 178 aaKnown RBP15.66■□□□□ 0.1
AC016877.3-201ENST00000606778 DMRT2Q9Y5R5 561 aa15.58■□□□□ 0.08
AC016877.3-201ENST00000606778 RNF216Q9NWF9 866 aaPredicted RBP15.41■□□□□ 0.06
AC016877.3-201ENST00000606778 SLC4A1APQ9BWU0 796 aaKnown RBP15.32■□□□□ 0.04
AC016877.3-201ENST00000606778 HOXD11P31277 338 aaPredicted RBP15.31■□□□□ 0.04
AC016877.3-201ENST00000606778 DNAJC5BQ9UF47 199 aa15.13■□□□□ 0.01
AC016877.3-201ENST00000606778 EHMT2Q96KQ7 1210 aa15.08■□□□□ 0
AC016877.3-201ENST00000606778 DCAF8L1A6NGE4 600 aa14.92□□□□□ -0.02
AC016877.3-201ENST00000606778 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
AC016877.3-201ENST00000606778 ZBTB22O15209 634 aa14.81□□□□□ -0.04
AC016877.3-201ENST00000606778 SLC4A2P04920 1241 aa14.76□□□□□ -0.05
AC016877.3-201ENST00000606778 FOXD4L1Q9NU39 408 aa14.72□□□□□ -0.05
AC016877.3-201ENST00000606778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.6□□□□□ -0.07
AC016877.3-201ENST00000606778 MYCNP04198 464 aaPredicted RBP14.43□□□□□ -0.1
AC016877.3-201ENST00000606778 U3KPZ7 1027 aaPredicted RBP14.4□□□□□ -0.1
AC016877.3-201ENST00000606778 RNF39Q9H2S5 420 aa14.25□□□□□ -0.13
AC016877.3-201ENST00000606778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.21□□□□□ -0.13
AC016877.3-201ENST00000606778 HNRNPUL2Q1KMD3 747 aaKnown RBP14.21□□□□□ -0.13
AC016877.3-201ENST00000606778 SAMD1Q6SPF0 538 aaPredicted RBP14.18□□□□□ -0.14
AC016877.3-201ENST00000606778 ATXN8OSP0DMR3 200 aa14.17□□□□□ -0.14
AC016877.3-201ENST00000606778 ATF5Q9Y2D1 282 aaPredicted RBP14.11□□□□□ -0.15
AC016877.3-201ENST00000606778 C1QBPQ07021 282 aaKnown RBP14.06□□□□□ -0.16
AC016877.3-201ENST00000606778 APLP2Q06481 763 aa14□□□□□ -0.17
AC016877.3-201ENST00000606778 SPINK5Q9NQ38 1064 aaPredicted RBP13.97□□□□□ -0.17
AC016877.3-201ENST00000606778 CAPN15O75808 1086 aa13.88□□□□□ -0.19
AC016877.3-201ENST00000606778 TRHP20396 242 aaPredicted RBP13.87□□□□□ -0.19
AC016877.3-201ENST00000606778 ZNF219Q9P2Y4 722 aaPredicted RBP13.84□□□□□ -0.19
AC016877.3-201ENST00000606778 CACNB1Q02641 598 aaPredicted RBP13.77□□□□□ -0.21
AC016877.3-201ENST00000606778 POLA2Q14181 598 aa13.68□□□□□ -0.22
AC016877.3-201ENST00000606778 ABCB7O75027 752 aa13.65□□□□□ -0.22
AC016877.3-201ENST00000606778 DSG3P32926 999 aa13.62□□□□□ -0.23
AC016877.3-201ENST00000606778 MKRN4PQ13434 485 aaPredicted RBP13.48□□□□□ -0.25
AC016877.3-201ENST00000606778 FBLN2P98095 1184 aa13.43□□□□□ -0.26
AC016877.3-201ENST00000606778 FKBP8Q14318 412 aa13.39□□□□□ -0.27
AC016877.3-201ENST00000606778 ZBTB12Q9Y330 459 aaPredicted RBP13.39□□□□□ -0.27
AC016877.3-201ENST00000606778 SPDYE4A6NLX3 237 aa13.23□□□□□ -0.29
AC016877.3-201ENST00000606778 OSCARQ8IYS5 282 aa13.2□□□□□ -0.3
AC016877.3-201ENST00000606778 SPDYE2BA6NHP3 402 aa13.07□□□□□ -0.32
AC016877.3-201ENST00000606778 SPDYE6P0CI01 402 aa13.07□□□□□ -0.32
AC016877.3-201ENST00000606778 SPDYE2Q495Y8 402 aa13.07□□□□□ -0.32
AC016877.3-201ENST00000606778 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
AC016877.3-201ENST00000606778 PROM2Q8N271 834 aa13.02□□□□□ -0.33
AC016877.3-201ENST00000606778 SSUH2Q9Y2M2 353 aa13□□□□□ -0.33
AC016877.3-201ENST00000606778 RBM42Q9BTD8 480 aaKnown RBP12.92□□□□□ -0.34
AC016877.3-201ENST00000606778 PABPN1Q86U42 306 aaKnown RBP eCLIP12.91□□□□□ -0.34
AC016877.3-201ENST00000606778 FBXO3Q9UK99 471 aa12.84□□□□□ -0.35
AC016877.3-201ENST00000606778 AKT1S1Q96B36 256 aa12.82□□□□□ -0.36
AC016877.3-201ENST00000606778 REM2Q8IYK8 340 aaPredicted RBP12.72□□□□□ -0.37
AC016877.3-201ENST00000606778 POTEHQ6S545 545 aa12.69□□□□□ -0.38
AC016877.3-201ENST00000606778 VASPP50552 380 aaPredicted RBP12.68□□□□□ -0.38
AC016877.3-201ENST00000606778 STAG3Q9UJ98 1225 aa12.68□□□□□ -0.38
AC016877.3-201ENST00000606778 SPDYE1Q8NFV5 336 aaPredicted RBP12.65□□□□□ -0.38
AC016877.3-201ENST00000606778 CLEC11AQ9Y240 323 aa12.62□□□□□ -0.39
AC016877.3-201ENST00000606778 PITPNM1O00562 1244 aa12.57□□□□□ -0.4
AC016877.3-201ENST00000606778 IFNLR1Q8IU57 520 aaPredicted RBP12.55□□□□□ -0.4
AC016877.3-201ENST00000606778 MIER1Q8N108 512 aa12.54□□□□□ -0.4
AC016877.3-201ENST00000606778 PRR29P0C7W0 189 aa12.52□□□□□ -0.41
AC016877.3-201ENST00000606778 PLCD3Q8N3E9 789 aa12.52□□□□□ -0.41
AC016877.3-201ENST00000606778 RTN4Q9NQC3 1192 aaKnown RBP12.46□□□□□ -0.41
AC016877.3-201ENST00000606778 KLHL34Q8N239 644 aa12.44□□□□□ -0.42
AC016877.3-201ENST00000606778 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
AC016877.3-201ENST00000606778 PLEKHG5O94827 1062 aa12.41□□□□□ -0.42
AC016877.3-201ENST00000606778 CREBZFQ9NS37 354 aa12.41□□□□□ -0.42
AC016877.3-201ENST00000606778 CHRDL2Q6WN34 429 aa12.36□□□□□ -0.43
AC016877.3-201ENST00000606778 SPOCK2Q92563 424 aa12.34□□□□□ -0.43
AC016877.3-201ENST00000606778 ZBTB47Q9UFB7 747 aaPredicted RBP12.33□□□□□ -0.44
AC016877.3-201ENST00000606778 CHADLQ6NUI6 762 aa12.31□□□□□ -0.44
AC016877.3-201ENST00000606778 MNX1P50219 401 aaPredicted RBP12.3□□□□□ -0.44
AC016877.3-201ENST00000606778 FXR2P51116 673 aaKnown RBP eCLIP12.3□□□□□ -0.44
AC016877.3-201ENST00000606778 PRKAR2AP13861 404 aaKnown RBP12.26□□□□□ -0.45
AC016877.3-201ENST00000606778 PIP4P2Q8N4L2 257 aa12.25□□□□□ -0.45
AC016877.3-201ENST00000606778 NUBP1P53384 320 aa12.2□□□□□ -0.46
AC016877.3-201ENST00000606778 PKD2Q13563 968 aa12.19□□□□□ -0.46
AC016877.3-201ENST00000606778 FARP1Q9Y4F1 1045 aaPredicted RBP12.19□□□□□ -0.46
AC016877.3-201ENST00000606778 NPM1P06748 294 aaKnown RBP eCLIP12.16□□□□□ -0.46
AC016877.3-201ENST00000606778 CIZ1Q9ULV3 898 aaPredicted RBP12.15□□□□□ -0.46
AC016877.3-201ENST00000606778 RASEFQ8IZ41 740 aa12.13□□□□□ -0.47
AC016877.3-201ENST00000606778 DCAF8Q5TAQ9 597 aa12.1□□□□□ -0.47
AC016877.3-201ENST00000606778 ECM2O94769 699 aaPredicted RBP12.07□□□□□ -0.48
AC016877.3-201ENST00000606778 GSE1Q14687 1217 aa12.07□□□□□ -0.48
AC016877.3-201ENST00000606778 FAM212AQ96EL1 285 aa12.07□□□□□ -0.48
AC016877.3-201ENST00000606778 TSPYL2Q9H2G4 693 aaPredicted RBP12.01□□□□□ -0.49
AC016877.3-201ENST00000606778 TRIM41Q8WV44 630 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms