Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC8.58□□□□□ -1.04
HOXA2O43364 HCG18-244ENST00000602516 2890 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 TAGAP-203ENST00000367066 3887 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
HOXA2O43364 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC8.58□□□□□ -1.04
HOXA2O43364 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
HOXA2O43364 CASP7-207ENST00000452490 2271 ntTSL 2 BASIC8.58□□□□□ -1.04
HOXA2O43364 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HOXA2O43364 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
HOXA2O43364 RNA5SP378-201ENST00000363646 120 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 Y_RNA.160-201ENST00000363677 92 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 PRCP-202ENST00000393399 2120 ntTSL 2 BASIC8.58□□□□□ -1.04
HOXA2O43364 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
HOXA2O43364 RPL31P1-201ENST00000398116 372 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 FAT1P1-201ENST00000406588 507 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 AC023141.1-201ENST00000419418 379 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 RBM22P7-201ENST00000421321 280 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC8.58□□□□□ -1.04
HOXA2O43364 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
HOXA2O43364 FMO7P-201ENST00000436045 768 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC8.58□□□□□ -1.04
HOXA2O43364 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC8.58□□□□□ -1.04
HOXA2O43364 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC8.58□□□□□ -1.04
HOXA2O43364 YWHAZP2-201ENST00000440317 728 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 SNX18P9-201ENST00000440580 835 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HOXA2O43364 BX322784.1-201ENST00000455793 1077 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC8.58□□□□□ -1.04
HOXA2O43364 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC8.58□□□□□ -1.04
HOXA2O43364 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC8.58□□□□□ -1.04
HOXA2O43364 RN7SL228P-201ENST00000470060 303 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC8.58□□□□□ -1.04
HOXA2O43364 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC8.58□□□□□ -1.04
HOXA2O43364 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC8.58□□□□□ -1.04
HOXA2O43364 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
HOXA2O43364 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC8.58□□□□□ -1.04
HOXA2O43364 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC8.58□□□□□ -1.04
HOXA2O43364 LRRC34P2-201ENST00000514850 553 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC8.58□□□□□ -1.04
HOXA2O43364 MRVI1-AS1-201ENST00000525578 829 ntTSL 3 BASIC8.58□□□□□ -1.04
HOXA2O43364 OR5AQ1P-201ENST00000527596 927 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC8.58□□□□□ -1.04
HOXA2O43364 NPIPB14P-203ENST00000532298 987 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC8.58□□□□□ -1.04
HOXA2O43364 AP000619.1-201ENST00000540293 1000 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC8.58□□□□□ -1.04
HOXA2O43364 NPIPP1-203ENST00000547107 1071 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 CR383656.6-201ENST00000550518 394 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC8.58□□□□□ -1.04
HOXA2O43364 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC8.58□□□□□ -1.04
HOXA2O43364 AC012146.2-201ENST00000576545 416 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 RN7SL657P-201ENST00000582431 293 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 AC008752.3-201ENST00000588113 712 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 AC060780.3-201ENST00000589464 80 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC8.58□□□□□ -1.04
HOXA2O43364 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC8.58□□□□□ -1.04
HOXA2O43364 AC093838.1-201ENST00000613014 469 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC8.58□□□□□ -1.04
HOXA2O43364 AL121890.2-201ENST00000617644 465 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC8.58□□□□□ -1.04
HOXA2O43364 LINC01347-202ENST00000627498 3841 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HOXA2O43364 AL139254.2-202ENST00000641937 1156 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HOXA2O43364 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
HOXA2O43364 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC8.58□□□□□ -1.04
HOXA2O43364 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HOXA2O43364 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HOXA2O43364 SEC63P2-201ENST00000503863 1939 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
HOXA2O43364 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HOXA2O43364 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.58□□□□□ -1.04
HOXA2O43364 BX284613.1-201ENST00000452221 1641 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 AL162632.3-201ENST00000566976 1625 ntBASIC8.58□□□□□ -1.04
HOXA2O43364 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
HOXA2O43364 AC008537.3-201ENST00000623128 1881 ntBASIC8.57□□□□□ -1.04
HOXA2O43364 HELQ-204ENST00000510985 3315 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HOXA2O43364 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HOXA2O43364 AL136140.2-201ENST00000624717 1705 ntBASIC8.57□□□□□ -1.04
HOXA2O43364 ATP5A1P1-201ENST00000454088 1321 ntBASIC8.57□□□□□ -1.04
HOXA2O43364 AC109315.1-201ENST00000584143 1347 ntBASIC8.57□□□□□ -1.04
HOXA2O43364 HMBOX1-201ENST00000287701 3184 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HOXA2O43364 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HOXA2O43364 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HOXA2O43364 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HOXA2O43364 FAM13C-214ENST00000611933 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
HOXA2O43364 DPF3-203ENST00000541685 4077 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HOXA2O43364 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HOXA2O43364 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC8.57□□□□□ -1.04
HOXA2O43364 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
HOXA2O43364 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.57□□□□□ -1.04
HOXA2O43364 CAV1-201ENST00000341049 2704 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
HOXA2O43364 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC8.57□□□□□ -1.04
HOXA2O43364 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
HOXA2O43364 AL157831.2-201ENST00000564681 3095 ntBASIC8.57□□□□□ -1.04
HOXA2O43364 MAPK6PS3-201ENST00000403865 2162 ntBASIC8.57□□□□□ -1.04
HOXA2O43364 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
HOXA2O43364 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.57□□□□□ -1.04
HOXA2O43364 RN7SKP50-201ENST00000364694 315 ntBASIC8.57□□□□□ -1.04
HOXA2O43364 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
HOXA2O43364 AL080285.1-201ENST00000404225 984 ntBASIC8.57□□□□□ -1.04
HOXA2O43364 HMGB3P18-201ENST00000406327 590 ntBASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms