RNA–Protein interactions for RNA: ENST00000443303.1

LINC01013-203, Transcript of long intergenic non-protein coding RNA 1013, humanhuman

TSL 1 (best) BASIC

Gene LINC01013, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01013-203ENST00000443303 AEBP2Q6ZN18 517 aaPredicted RBP28.09■■■□□ 2.09
LINC01013-203ENST00000443303 CHIC1Q5VXU3 224 aa26.14■■□□□ 1.78
LINC01013-203ENST00000443303 SENP3Q9H4L4 574 aaPredicted RBP24.03■■□□□ 1.44
LINC01013-203ENST00000443303 PHF23Q9BUL5 403 aaPredicted RBP23.6■■□□□ 1.37
LINC01013-203ENST00000443303 POTEDQ86YR6 584 aa22.59■■□□□ 1.21
LINC01013-203ENST00000443303 FOXD1Q16676 465 aa22.57■■□□□ 1.2
LINC01013-203ENST00000443303 MSH5O43196 834 aa21.41■■□□□ 1.02
LINC01013-203ENST00000443303 PIAS4Q8N2W9 510 aaPredicted RBP20.83■□□□□ 0.93
LINC01013-203ENST00000443303 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
LINC01013-203ENST00000443303 ADRA2BP18089 450 aa20.26■□□□□ 0.83
LINC01013-203ENST00000443303 PLPPR3Q6T4P5 718 aa20.07■□□□□ 0.8
LINC01013-203ENST00000443303 CACNB1Q02641 598 aaPredicted RBP18.98■□□□□ 0.63
LINC01013-203ENST00000443303 DMRT2Q9Y5R5 561 aa18.93■□□□□ 0.62
LINC01013-203ENST00000443303 MAPK8IP2Q13387 824 aaPredicted RBP18.91■□□□□ 0.62
LINC01013-203ENST00000443303 SCAF1Q9H7N4 1312 aaKnown RBP18.44■□□□□ 0.54
LINC01013-203ENST00000443303 RNF39Q9H2S5 420 aa18.23■□□□□ 0.51
LINC01013-203ENST00000443303 DCAF8L1A6NGE4 600 aa18.2■□□□□ 0.5
LINC01013-203ENST00000443303 C1QBPQ07021 282 aaKnown RBP17.86■□□□□ 0.45
LINC01013-203ENST00000443303 HOXD11P31277 338 aaPredicted RBP17.85■□□□□ 0.45
LINC01013-203ENST00000443303 PPP4R3CPQ6ZMV5 832 aa17.5■□□□□ 0.39
LINC01013-203ENST00000443303 POTEHQ6S545 545 aa17.49■□□□□ 0.39
LINC01013-203ENST00000443303 RNF216Q9NWF9 866 aaPredicted RBP17.44■□□□□ 0.38
LINC01013-203ENST00000443303 DNAJC5BQ9UF47 199 aa17.37■□□□□ 0.37
LINC01013-203ENST00000443303 CNKSR2Q8WXI2 1034 aa17.36■□□□□ 0.37
LINC01013-203ENST00000443303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17■□□□□ 0.31
LINC01013-203ENST00000443303 DSG3P32926 999 aa16.75■□□□□ 0.27
LINC01013-203ENST00000443303 SPINK5Q9NQ38 1064 aaPredicted RBP16.64■□□□□ 0.25
LINC01013-203ENST00000443303 CAPN15O75808 1086 aa16.61■□□□□ 0.25
LINC01013-203ENST00000443303 U3KPZ7 1027 aaPredicted RBP16.57■□□□□ 0.24
LINC01013-203ENST00000443303 NCBP3Q53F19 620 aaKnown RBP16.48■□□□□ 0.23
LINC01013-203ENST00000443303 NPM3O75607 178 aaKnown RBP16.32■□□□□ 0.2
LINC01013-203ENST00000443303 ABCB7O75027 752 aa16.19■□□□□ 0.18
LINC01013-203ENST00000443303 TRHP20396 242 aaPredicted RBP16.12■□□□□ 0.17
LINC01013-203ENST00000443303 CHRDL2Q6WN34 429 aa16.02■□□□□ 0.16
LINC01013-203ENST00000443303 ZNF219Q9P2Y4 722 aaPredicted RBP16.01■□□□□ 0.15
LINC01013-203ENST00000443303 SP7Q8TDD2 431 aaPredicted RBP15.95■□□□□ 0.14
LINC01013-203ENST00000443303 RBM42Q9BTD8 480 aaKnown RBP15.94■□□□□ 0.14
LINC01013-203ENST00000443303 APLP2Q06481 763 aa15.89■□□□□ 0.13
LINC01013-203ENST00000443303 SLC4A2P04920 1241 aa15.85■□□□□ 0.13
LINC01013-203ENST00000443303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.67■□□□□ 0.1
LINC01013-203ENST00000443303 HNRNPUL2Q1KMD3 747 aaKnown RBP15.67■□□□□ 0.1
LINC01013-203ENST00000443303 SAMD1Q6SPF0 538 aaPredicted RBP15.57■□□□□ 0.08
LINC01013-203ENST00000443303 POLA2Q14181 598 aa15.47■□□□□ 0.07
LINC01013-203ENST00000443303 PIP4P2Q8N4L2 257 aa15.47■□□□□ 0.07
LINC01013-203ENST00000443303 HAX1O00165 279 aa15.41■□□□□ 0.06
LINC01013-203ENST00000443303 AKT1S1Q96B36 256 aa15.4■□□□□ 0.06
LINC01013-203ENST00000443303 REM2Q8IYK8 340 aaPredicted RBP15.29■□□□□ 0.04
LINC01013-203ENST00000443303 EVX2Q03828 476 aa15.22■□□□□ 0.03
LINC01013-203ENST00000443303 FXR2P51116 673 aaKnown RBP eCLIP15.2■□□□□ 0.02
LINC01013-203ENST00000443303 KCNA4P22459 653 aa15.18■□□□□ 0.02
LINC01013-203ENST00000443303 PITPNM1O00562 1244 aa15.16■□□□□ 0.02
LINC01013-203ENST00000443303 MYCNP04198 464 aaPredicted RBP15.07■□□□□ 0
LINC01013-203ENST00000443303 OSCARQ8IYS5 282 aa15.04■□□□□ -0
LINC01013-203ENST00000443303 ZBTB12Q9Y330 459 aaPredicted RBP15.02■□□□□ -0
LINC01013-203ENST00000443303 LHX8Q68G74 356 aa14.93□□□□□ -0.02
LINC01013-203ENST00000443303 ATF5Q9Y2D1 282 aaPredicted RBP14.89□□□□□ -0.03
LINC01013-203ENST00000443303 PLSCR2Q9NRY7 297 aa14.8□□□□□ -0.04
LINC01013-203ENST00000443303 GABBR2O75899 941 aa14.77□□□□□ -0.05
LINC01013-203ENST00000443303 C19orf67A6NJJ6 358 aa14.75□□□□□ -0.05
LINC01013-203ENST00000443303 PRKAR2AP13861 404 aaKnown RBP14.74□□□□□ -0.05
LINC01013-203ENST00000443303 NISCHQ9Y2I1 1504 aa14.7□□□□□ -0.06
LINC01013-203ENST00000443303 CLEC11AQ9Y240 323 aa14.54□□□□□ -0.08
LINC01013-203ENST00000443303 SPDYE2BA6NHP3 402 aa14.5□□□□□ -0.09
LINC01013-203ENST00000443303 SPDYE6P0CI01 402 aa14.5□□□□□ -0.09
LINC01013-203ENST00000443303 SPDYE2Q495Y8 402 aa14.5□□□□□ -0.09
LINC01013-203ENST00000443303 POTEIP0CG38 1075 aa14.49□□□□□ -0.09
LINC01013-203ENST00000443303 SPDYE1Q8NFV5 336 aaPredicted RBP14.48□□□□□ -0.09
LINC01013-203ENST00000443303 FOXD4L1Q9NU39 408 aa14.41□□□□□ -0.1
LINC01013-203ENST00000443303 CHADLQ6NUI6 762 aa14.4□□□□□ -0.1
LINC01013-203ENST00000443303 FBLN2P98095 1184 aa14.26□□□□□ -0.13
LINC01013-203ENST00000443303 SSUH2Q9Y2M2 353 aa14.24□□□□□ -0.13
LINC01013-203ENST00000443303 CD44P16070 742 aaKnown RBP14.21□□□□□ -0.13
LINC01013-203ENST00000443303 ZNF692Q9BU19 519 aaPredicted RBP14.19□□□□□ -0.14
LINC01013-203ENST00000443303 MKRN4PQ13434 485 aaPredicted RBP14.14□□□□□ -0.15
LINC01013-203ENST00000443303 POTEMA6NI47 508 aa14.13□□□□□ -0.15
LINC01013-203ENST00000443303 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
LINC01013-203ENST00000443303 DCBLD2Q96PD2 775 aa14.13□□□□□ -0.15
LINC01013-203ENST00000443303 OTUD5Q96G74 571 aa14.12□□□□□ -0.15
LINC01013-203ENST00000443303 CLCN6P51797 869 aa14.11□□□□□ -0.15
LINC01013-203ENST00000443303 SLC4A1APQ9BWU0 796 aaKnown RBP14.09□□□□□ -0.15
LINC01013-203ENST00000443303 POTEGQ6S5H5 508 aa14.06□□□□□ -0.16
LINC01013-203ENST00000443303 FARP1Q9Y4F1 1045 aaPredicted RBP14.05□□□□□ -0.16
LINC01013-203ENST00000443303 ATXN8OSP0DMR3 200 aa14.03□□□□□ -0.16
LINC01013-203ENST00000443303 POTEB2H3BUK9 544 aa14□□□□□ -0.17
LINC01013-203ENST00000443303 ZBTB22O15209 634 aa13.97□□□□□ -0.17
LINC01013-203ENST00000443303 PABPN1Q86U42 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
LINC01013-203ENST00000443303 ZNF579Q8NAF0 562 aaKnown RBP13.94□□□□□ -0.18
LINC01013-203ENST00000443303 GALR2O43603 387 aaPredicted RBP13.87□□□□□ -0.19
LINC01013-203ENST00000443303 PCDH10Q9P2E7 1040 aa13.87□□□□□ -0.19
LINC01013-203ENST00000443303 ZRANB1Q9UGI0 708 aa13.86□□□□□ -0.19
LINC01013-203ENST00000443303 PELP1Q8IZL8 1130 aaKnown RBP13.71□□□□□ -0.21
LINC01013-203ENST00000443303 LCE2DQ5TA82 110 aaPredicted RBP13.7□□□□□ -0.22
LINC01013-203ENST00000443303 POTEJP0CG39 1038 aa13.65□□□□□ -0.22
LINC01013-203ENST00000443303 PHF12Q96QT6 1004 aa13.62□□□□□ -0.23
LINC01013-203ENST00000443303 CREBZFQ9NS37 354 aa13.61□□□□□ -0.23
LINC01013-203ENST00000443303 FAM163AQ96GL9 167 aaPredicted RBP13.57□□□□□ -0.24
LINC01013-203ENST00000443303 METRNQ9UJH8 293 aa13.57□□□□□ -0.24
LINC01013-203ENST00000443303 MAMSTRQ6ZN01 415 aa13.5□□□□□ -0.25
LINC01013-203ENST00000443303 PAK3O75914 559 aaPredicted RBP13.49□□□□□ -0.25
LINC01013-203ENST00000443303 ASTLQ6HA08 431 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms