RNA–Protein interactions for RNA: ENST00000222482.8

CPA4-201, Transcript of carboxypeptidase A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPA4, Length 2,797 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-201ENST00000222482 NISCHQ9Y2I1 1504 aa16.74■□□□□ 0.27
CPA4-201ENST00000222482 CCDC180Q9P1Z9 1646 aa14.94□□□□□ -0.02
CPA4-201ENST00000222482 ABCC9O60706 1549 aa14.9□□□□□ -0.02
CPA4-201ENST00000222482 SHROOM4Q9ULL8 1493 aa14.81□□□□□ -0.04
CPA4-201ENST00000222482 SUPT5HO00267 1087 aaKnown RBP14.58□□□□□ -0.07
CPA4-201ENST00000222482 MYO15BQ96JP2 1530 aa14.24□□□□□ -0.13
CPA4-201ENST00000222482 RB1CC1Q8TDY2 1594 aa14.23□□□□□ -0.13
CPA4-201ENST00000222482 DCAF8L2P0C7V8 631 aa14.18□□□□□ -0.14
CPA4-201ENST00000222482 ZCCHC6Q5VYS8 1495 aaKnown RBP14.18□□□□□ -0.14
CPA4-201ENST00000222482 CHIC1Q5VXU3 224 aa14.14□□□□□ -0.15
CPA4-201ENST00000222482 NACADO15069 1562 aa14.13□□□□□ -0.15
CPA4-201ENST00000222482 SLC24A1O60721 1099 aa14.09□□□□□ -0.15
CPA4-201ENST00000222482 HRCP23327 699 aa14.08□□□□□ -0.16
CPA4-201ENST00000222482 DNAJC5BQ9UF47 199 aa14.07□□□□□ -0.16
CPA4-201ENST00000222482 PCGF6Q9BYE7 350 aa14.06□□□□□ -0.16
CPA4-201ENST00000222482 PPARGC1BQ86YN6 1023 aaKnown RBP14□□□□□ -0.17
CPA4-201ENST00000222482 UNC13AQ9UPW8 1703 aa13.9□□□□□ -0.18
CPA4-201ENST00000222482 LOC105371045A0A1W2PR82 267 aa13.89□□□□□ -0.19
CPA4-201ENST00000222482 PABPN1Q86U42 306 aaKnown RBP eCLIP13.81□□□□□ -0.2
CPA4-201ENST00000222482 BICRAQ9NZM4 1560 aa13.8□□□□□ -0.2
CPA4-201ENST00000222482 DCAF1Q9Y4B6 1507 aa13.7□□□□□ -0.22
CPA4-201ENST00000222482 PELP1Q8IZL8 1130 aaKnown RBP13.61□□□□□ -0.23
CPA4-201ENST00000222482 EHMT2Q96KQ7 1210 aa13.58□□□□□ -0.24
CPA4-201ENST00000222482 TRIM26Q12899 539 aaPredicted RBP13.56□□□□□ -0.24
CPA4-201ENST00000222482 FAM9AQ8IZU1 332 aaPredicted RBP13.54□□□□□ -0.24
CPA4-201ENST00000222482 CC2D2AQ9P2K1 1620 aa13.52□□□□□ -0.25
CPA4-201ENST00000222482 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
CPA4-201ENST00000222482 SCRIBQ14160 1630 aa13.48□□□□□ -0.25
CPA4-201ENST00000222482 EIF4G1Q04637 1599 aaKnown RBP13.46□□□□□ -0.25
CPA4-201ENST00000222482 TRIM41Q8WV44 630 aa13.43□□□□□ -0.26
CPA4-201ENST00000222482 RSF1Q96T23 1441 aaPredicted RBP13.39□□□□□ -0.27
CPA4-201ENST00000222482 MYT1Q01538 1121 aa13.26□□□□□ -0.29
CPA4-201ENST00000222482 ZEB1P37275 1124 aaPredicted RBP13.25□□□□□ -0.29
CPA4-201ENST00000222482 SCAF1Q9H7N4 1312 aaKnown RBP13.23□□□□□ -0.29
CPA4-201ENST00000222482 TTBK1Q5TCY1 1321 aaPredicted RBP13.17□□□□□ -0.3
CPA4-201ENST00000222482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.16□□□□□ -0.3
CPA4-201ENST00000222482 MROH2BQ7Z745 1585 aa13.12□□□□□ -0.31
CPA4-201ENST00000222482 WIZO95785 1651 aa13.1□□□□□ -0.31
CPA4-201ENST00000222482 PLPPR3Q6T4P5 718 aa13.09□□□□□ -0.31
CPA4-201ENST00000222482 DNAJC5Q9H3Z4 198 aa13.08□□□□□ -0.32
CPA4-201ENST00000222482 CCER1Q8TC90 406 aaPredicted RBP13.07□□□□□ -0.32
CPA4-201ENST00000222482 NCAPD3P42695 1498 aa13.03□□□□□ -0.32
CPA4-201ENST00000222482 CUX2O14529 1486 aa13.01□□□□□ -0.33
CPA4-201ENST00000222482 NEUROD1Q13562 356 aa12.98□□□□□ -0.33
CPA4-201ENST00000222482 ABCC8Q09428 1581 aa12.95□□□□□ -0.34
CPA4-201ENST00000222482 ATAD2BQ9ULI0 1458 aa12.94□□□□□ -0.34
CPA4-201ENST00000222482 HMGXB3Q12766 1538 aa12.93□□□□□ -0.34
CPA4-201ENST00000222482 ACIN1Q9UKV3 1341 aaKnown RBP12.93□□□□□ -0.34
CPA4-201ENST00000222482 SMARCA2P51531 1590 aa12.93□□□□□ -0.34
CPA4-201ENST00000222482 DIEXFQ68CQ4 756 aaKnown RBP12.91□□□□□ -0.34
CPA4-201ENST00000222482 SMARCA4P51532 1647 aa12.9□□□□□ -0.34
CPA4-201ENST00000222482 CCDC88BA6NC98 1476 aa12.9□□□□□ -0.34
CPA4-201ENST00000222482 ERCC6Q03468 1493 aa12.9□□□□□ -0.34
CPA4-201ENST00000222482 BAZ1AQ9NRL2 1556 aaPredicted RBP12.9□□□□□ -0.35
CPA4-201ENST00000222482 GTF3C3Q9Y5Q9 886 aa12.87□□□□□ -0.35
CPA4-201ENST00000222482 SOGA1O94964 1423 aa12.85□□□□□ -0.35
CPA4-201ENST00000222482 CEP162Q5TB80 1403 aa12.84□□□□□ -0.35
CPA4-201ENST00000222482 PEG3Q9GZU2 1588 aa12.83□□□□□ -0.36
CPA4-201ENST00000222482 RTN4Q9NQC3 1192 aaKnown RBP12.83□□□□□ -0.36
CPA4-201ENST00000222482 RUSC2Q8N2Y8 1516 aa12.81□□□□□ -0.36
CPA4-201ENST00000222482 UBTFP17480 764 aaKnown RBP12.81□□□□□ -0.36
CPA4-201ENST00000222482 YTHDC1Q96MU7 727 aaKnown RBP12.81□□□□□ -0.36
CPA4-201ENST00000222482 BAZ1BQ9UIG0 1483 aaKnown RBP12.79□□□□□ -0.36
CPA4-201ENST00000222482 CENPBP07199 599 aaPredicted RBP12.76□□□□□ -0.37
CPA4-201ENST00000222482 NESP48681 1621 aa12.76□□□□□ -0.37
CPA4-201ENST00000222482 LAMC3Q9Y6N6 1575 aa12.76□□□□□ -0.37
CPA4-201ENST00000222482 TOP2AP11388 1531 aaKnown RBP12.75□□□□□ -0.37
CPA4-201ENST00000222482 WRNQ14191 1432 aaPredicted RBP eCLIP12.74□□□□□ -0.37
CPA4-201ENST00000222482 THOC2Q8NI27 1593 aaKnown RBP12.74□□□□□ -0.37
CPA4-201ENST00000222482 HNRNPUL2Q1KMD3 747 aaKnown RBP12.74□□□□□ -0.37
CPA4-201ENST00000222482 CSRNP3Q8WYN3 585 aa12.72□□□□□ -0.37
CPA4-201ENST00000222482 RANGAP1P46060 587 aaPredicted RBP12.72□□□□□ -0.37
CPA4-201ENST00000222482 TNIKQ9UKE5 1360 aa12.71□□□□□ -0.37
CPA4-201ENST00000222482 ZNF316A6NFI3 1004 aaPredicted RBP12.69□□□□□ -0.38
CPA4-201ENST00000222482 PDS5BQ9NTI5 1447 aa12.67□□□□□ -0.38
CPA4-201ENST00000222482 MIER1Q8N108 512 aa12.65□□□□□ -0.38
CPA4-201ENST00000222482 KIF21AQ7Z4S6 1674 aa12.65□□□□□ -0.38
CPA4-201ENST00000222482 DAXXQ9UER7 740 aaPredicted RBP12.65□□□□□ -0.38
CPA4-201ENST00000222482 GOLGA3Q08378 1498 aa12.62□□□□□ -0.39
CPA4-201ENST00000222482 CADPSQ9ULU8 1353 aa12.59□□□□□ -0.39
CPA4-201ENST00000222482 MRC2Q9UBG0 1479 aa12.56□□□□□ -0.4
CPA4-201ENST00000222482 EEA1Q15075 1411 aa12.56□□□□□ -0.4
CPA4-201ENST00000222482 WDR62O43379 1518 aa12.55□□□□□ -0.4
CPA4-201ENST00000222482 SYNJ1O43426 1573 aa12.55□□□□□ -0.4
CPA4-201ENST00000222482 CLIP1P30622 1438 aa12.54□□□□□ -0.4
CPA4-201ENST00000222482 CEP164Q9UPV0 1460 aa12.5□□□□□ -0.41
CPA4-201ENST00000222482 PRKCSHP14314 528 aaPredicted RBP12.5□□□□□ -0.41
CPA4-201ENST00000222482 APLP2Q06481 763 aa12.5□□□□□ -0.41
CPA4-201ENST00000222482 RAPGEF2Q9Y4G8 1499 aa12.49□□□□□ -0.41
CPA4-201ENST00000222482 VPS8Q8N3P4 1428 aa12.46□□□□□ -0.41
CPA4-201ENST00000222482 KIF21BO75037 1637 aa12.45□□□□□ -0.42
CPA4-201ENST00000222482 CFTRP13569 1480 aa12.44□□□□□ -0.42
CPA4-201ENST00000222482 FANCD2Q9BXW9 1451 aa12.44□□□□□ -0.42
CPA4-201ENST00000222482 NCBP3Q53F19 620 aaKnown RBP12.41□□□□□ -0.42
CPA4-201ENST00000222482 KANK4Q5T7N3 995 aaPredicted RBP12.39□□□□□ -0.43
CPA4-201ENST00000222482 ITGAEP38570 1179 aa12.37□□□□□ -0.43
CPA4-201ENST00000222482 PRDM2Q13029 1718 aa12.36□□□□□ -0.43
CPA4-201ENST00000222482 DHX57Q6P158 1386 aaKnown RBP12.36□□□□□ -0.43
CPA4-201ENST00000222482 AEBP2Q6ZN18 517 aaPredicted RBP12.35□□□□□ -0.43
CPA4-201ENST00000222482 URB2Q14146 1524 aaKnown RBP12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms