RNA–Protein interactions for RNA: ENST00000641937.1

AL139254.2-202, humanhuman

BASIC

Gene AL139254.2, Length 1,156 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139254.2-202ENST00000641937 AEBP2Q6ZN18 517 aaPredicted RBP22.47■■□□□ 1.19
AL139254.2-202ENST00000641937 CHIC1Q5VXU3 224 aa21.54■■□□□ 1.04
AL139254.2-202ENST00000641937 PHF23Q9BUL5 403 aaPredicted RBP19.01■□□□□ 0.63
AL139254.2-202ENST00000641937 SENP3Q9H4L4 574 aaPredicted RBP18.93■□□□□ 0.62
AL139254.2-202ENST00000641937 FOXD1Q16676 465 aa17.72■□□□□ 0.43
AL139254.2-202ENST00000641937 PLPPR3Q6T4P5 718 aa17.28■□□□□ 0.36
AL139254.2-202ENST00000641937 PPP6R1Q9UPN7 881 aa16.88■□□□□ 0.29
AL139254.2-202ENST00000641937 NISCHQ9Y2I1 1504 aa16.86■□□□□ 0.29
AL139254.2-202ENST00000641937 ADRA2BP18089 450 aa16.79■□□□□ 0.28
AL139254.2-202ENST00000641937 PIAS4Q8N2W9 510 aaPredicted RBP16.55■□□□□ 0.24
AL139254.2-202ENST00000641937 MSH5O43196 834 aa16.32■□□□□ 0.2
AL139254.2-202ENST00000641937 POTEDQ86YR6 584 aa15.85■□□□□ 0.13
AL139254.2-202ENST00000641937 MAPK8IP2Q13387 824 aaPredicted RBP15.36■□□□□ 0.05
AL139254.2-202ENST00000641937 ABCC9O60706 1549 aa15.33■□□□□ 0.04
AL139254.2-202ENST00000641937 PPP4R3CPQ6ZMV5 832 aa15.23■□□□□ 0.03
AL139254.2-202ENST00000641937 DNAJC5BQ9UF47 199 aa15.21■□□□□ 0.03
AL139254.2-202ENST00000641937 SCAF1Q9H7N4 1312 aaKnown RBP15.16■□□□□ 0.02
AL139254.2-202ENST00000641937 DMRT2Q9Y5R5 561 aa15.12■□□□□ 0.01
AL139254.2-202ENST00000641937 CNKSR2Q8WXI2 1034 aa14.83□□□□□ -0.04
AL139254.2-202ENST00000641937 CCDC180Q9P1Z9 1646 aa14.78□□□□□ -0.04
AL139254.2-202ENST00000641937 HOXD11P31277 338 aaPredicted RBP14.7□□□□□ -0.06
AL139254.2-202ENST00000641937 RNF216Q9NWF9 866 aaPredicted RBP14.63□□□□□ -0.07
AL139254.2-202ENST00000641937 NCBP3Q53F19 620 aaKnown RBP14.62□□□□□ -0.07
AL139254.2-202ENST00000641937 KCNA4P22459 653 aa14.6□□□□□ -0.07
AL139254.2-202ENST00000641937 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
AL139254.2-202ENST00000641937 DNAJC5Q9H3Z4 198 aa14.48□□□□□ -0.09
AL139254.2-202ENST00000641937 DCAF8L1A6NGE4 600 aa14.39□□□□□ -0.11
AL139254.2-202ENST00000641937 PABPN1Q86U42 306 aaKnown RBP eCLIP14.18□□□□□ -0.14
AL139254.2-202ENST00000641937 RB1CC1Q8TDY2 1594 aa14.17□□□□□ -0.14
AL139254.2-202ENST00000641937 ZCCHC6Q5VYS8 1495 aaKnown RBP14.1□□□□□ -0.15
AL139254.2-202ENST00000641937 RNF39Q9H2S5 420 aa14.06□□□□□ -0.16
AL139254.2-202ENST00000641937 DCAF8L2P0C7V8 631 aa14.02□□□□□ -0.17
AL139254.2-202ENST00000641937 NACADO15069 1562 aa13.92□□□□□ -0.18
AL139254.2-202ENST00000641937 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.91□□□□□ -0.18
AL139254.2-202ENST00000641937 SLC4A2P04920 1241 aa13.89□□□□□ -0.19
AL139254.2-202ENST00000641937 DCAF1Q9Y4B6 1507 aa13.89□□□□□ -0.19
AL139254.2-202ENST00000641937 BICRAQ9NZM4 1560 aa13.88□□□□□ -0.19
AL139254.2-202ENST00000641937 CECR2Q9BXF3 1484 aa13.88□□□□□ -0.19
AL139254.2-202ENST00000641937 UNC13AQ9UPW8 1703 aa13.86□□□□□ -0.19
AL139254.2-202ENST00000641937 CACNB1Q02641 598 aaPredicted RBP13.82□□□□□ -0.2
AL139254.2-202ENST00000641937 MYO15BQ96JP2 1530 aa13.8□□□□□ -0.2
AL139254.2-202ENST00000641937 CC2D2AQ9P2K1 1620 aa13.79□□□□□ -0.2
AL139254.2-202ENST00000641937 C1QBPQ07021 282 aaKnown RBP13.78□□□□□ -0.2
AL139254.2-202ENST00000641937 U3KPZ7 1027 aaPredicted RBP13.78□□□□□ -0.2
AL139254.2-202ENST00000641937 SLC4A1APQ9BWU0 796 aaKnown RBP13.76□□□□□ -0.21
AL139254.2-202ENST00000641937 SHROOM4Q9ULL8 1493 aa13.63□□□□□ -0.23
AL139254.2-202ENST00000641937 SCRIBQ14160 1630 aa13.62□□□□□ -0.23
AL139254.2-202ENST00000641937 EIF4G1Q04637 1599 aaKnown RBP13.57□□□□□ -0.24
AL139254.2-202ENST00000641937 CUX2O14529 1486 aa13.52□□□□□ -0.25
AL139254.2-202ENST00000641937 ZBTB22O15209 634 aa13.51□□□□□ -0.25
AL139254.2-202ENST00000641937 SPINK5Q9NQ38 1064 aaPredicted RBP13.5□□□□□ -0.25
AL139254.2-202ENST00000641937 TRIM41Q8WV44 630 aa13.46□□□□□ -0.25
AL139254.2-202ENST00000641937 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
AL139254.2-202ENST00000641937 MYCNP04198 464 aaPredicted RBP13.39□□□□□ -0.27
AL139254.2-202ENST00000641937 CAPN15O75808 1086 aa13.34□□□□□ -0.27
AL139254.2-202ENST00000641937 EHMT2Q96KQ7 1210 aa13.32□□□□□ -0.28
AL139254.2-202ENST00000641937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.3□□□□□ -0.28
AL139254.2-202ENST00000641937 HNRNPUL2Q1KMD3 747 aaKnown RBP13.3□□□□□ -0.28
AL139254.2-202ENST00000641937 SAMD1Q6SPF0 538 aaPredicted RBP13.29□□□□□ -0.28
AL139254.2-202ENST00000641937 DSG3P32926 999 aa13.27□□□□□ -0.29
AL139254.2-202ENST00000641937 ERCC6Q03468 1493 aa13.23□□□□□ -0.29
AL139254.2-202ENST00000641937 TRHP20396 242 aaPredicted RBP13.22□□□□□ -0.29
AL139254.2-202ENST00000641937 ATF5Q9Y2D1 282 aaPredicted RBP13.21□□□□□ -0.29
AL139254.2-202ENST00000641937 APLP2Q06481 763 aa13.18□□□□□ -0.3
AL139254.2-202ENST00000641937 ZNF219Q9P2Y4 722 aaPredicted RBP13.16□□□□□ -0.3
AL139254.2-202ENST00000641937 ABCB7O75027 752 aa13.13□□□□□ -0.31
AL139254.2-202ENST00000641937 CSRNP3Q8WYN3 585 aa13.11□□□□□ -0.31
AL139254.2-202ENST00000641937 MROH2BQ7Z745 1585 aa13.06□□□□□ -0.32
AL139254.2-202ENST00000641937 SMARCA4P51532 1647 aa13.02□□□□□ -0.33
AL139254.2-202ENST00000641937 RSF1Q96T23 1441 aaPredicted RBP13□□□□□ -0.33
AL139254.2-202ENST00000641937 BAZ1AQ9NRL2 1556 aaPredicted RBP12.99□□□□□ -0.33
AL139254.2-202ENST00000641937 NESP48681 1621 aa12.96□□□□□ -0.33
AL139254.2-202ENST00000641937 THOC2Q8NI27 1593 aaKnown RBP12.96□□□□□ -0.33
AL139254.2-202ENST00000641937 SUPT5HO00267 1087 aaKnown RBP12.96□□□□□ -0.33
AL139254.2-202ENST00000641937 ATXN8OSP0DMR3 200 aa12.96□□□□□ -0.33
AL139254.2-202ENST00000641937 POLA2Q14181 598 aa12.95□□□□□ -0.34
AL139254.2-202ENST00000641937 WIZO95785 1651 aa12.95□□□□□ -0.34
AL139254.2-202ENST00000641937 NCAPD3P42695 1498 aa12.91□□□□□ -0.34
AL139254.2-202ENST00000641937 ATAD2BQ9ULI0 1458 aa12.87□□□□□ -0.35
AL139254.2-202ENST00000641937 PEG3Q9GZU2 1588 aa12.84□□□□□ -0.35
AL139254.2-202ENST00000641937 SMARCA2P51531 1590 aa12.81□□□□□ -0.36
AL139254.2-202ENST00000641937 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
AL139254.2-202ENST00000641937 BAZ1BQ9UIG0 1483 aaKnown RBP12.75□□□□□ -0.37
AL139254.2-202ENST00000641937 TOP2AP11388 1531 aaKnown RBP12.74□□□□□ -0.37
AL139254.2-202ENST00000641937 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
AL139254.2-202ENST00000641937 KIF21AQ7Z4S6 1674 aa12.69□□□□□ -0.38
AL139254.2-202ENST00000641937 RIMBP3CA6NJZ7 1639 aa12.68□□□□□ -0.38
AL139254.2-202ENST00000641937 RIMBP3BA6NNM3 1639 aa12.68□□□□□ -0.38
AL139254.2-202ENST00000641937 RIMBP3Q9UFD9 1639 aa12.68□□□□□ -0.38
AL139254.2-202ENST00000641937 LAMC3Q9Y6N6 1575 aa12.68□□□□□ -0.38
AL139254.2-202ENST00000641937 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
AL139254.2-202ENST00000641937 PDS5BQ9NTI5 1447 aa12.64□□□□□ -0.39
AL139254.2-202ENST00000641937 MKRN4PQ13434 485 aaPredicted RBP12.61□□□□□ -0.39
AL139254.2-202ENST00000641937 WDR62O43379 1518 aa12.61□□□□□ -0.39
AL139254.2-202ENST00000641937 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
AL139254.2-202ENST00000641937 MRC2Q9UBG0 1479 aa12.59□□□□□ -0.39
AL139254.2-202ENST00000641937 ARHGEF11O15085 1522 aa12.58□□□□□ -0.4
AL139254.2-202ENST00000641937 CYB5RLQ6IPT4 315 aa12.55□□□□□ -0.4
AL139254.2-202ENST00000641937 ILDR1Q86SU0 546 aaPredicted RBP12.51□□□□□ -0.41
AL139254.2-202ENST00000641937 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms