RNA–Protein interactions for RNA: ENST00000341049.6

CAV1-201, Transcript of caveolin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAV1, Length 2,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAV1-201ENST00000341049 NISCHQ9Y2I1 1504 aa17.75■□□□□ 0.43
CAV1-201ENST00000341049 AEBP2Q6ZN18 517 aaPredicted RBP16.48■□□□□ 0.23
CAV1-201ENST00000341049 SHROOM4Q9ULL8 1493 aa15.88■□□□□ 0.13
CAV1-201ENST00000341049 SUPT5HO00267 1087 aaKnown RBP15.78■□□□□ 0.12
CAV1-201ENST00000341049 CHIC1Q5VXU3 224 aa15.74■□□□□ 0.11
CAV1-201ENST00000341049 HRCP23327 699 aa15.71■□□□□ 0.11
CAV1-201ENST00000341049 PPARGC1BQ86YN6 1023 aaKnown RBP15.48■□□□□ 0.07
CAV1-201ENST00000341049 PCGF6Q9BYE7 350 aa15.44■□□□□ 0.06
CAV1-201ENST00000341049 MYO15BQ96JP2 1530 aa15.35■□□□□ 0.05
CAV1-201ENST00000341049 DCAF8L2P0C7V8 631 aa15.17■□□□□ 0.02
CAV1-201ENST00000341049 PELP1Q8IZL8 1130 aaKnown RBP15.11■□□□□ 0.01
CAV1-201ENST00000341049 LOC105371045A0A1W2PR82 267 aa15.07■□□□□ 0
CAV1-201ENST00000341049 ZCCHC6Q5VYS8 1495 aaKnown RBP15.05■□□□□ -0
CAV1-201ENST00000341049 SCAF1Q9H7N4 1312 aaKnown RBP14.93□□□□□ -0.02
CAV1-201ENST00000341049 DCAF1Q9Y4B6 1507 aa14.93□□□□□ -0.02
CAV1-201ENST00000341049 TRIM26Q12899 539 aaPredicted RBP14.87□□□□□ -0.03
CAV1-201ENST00000341049 CCDC180Q9P1Z9 1646 aa14.77□□□□□ -0.05
CAV1-201ENST00000341049 ZEB1P37275 1124 aaPredicted RBP14.68□□□□□ -0.06
CAV1-201ENST00000341049 EHMT2Q96KQ7 1210 aa14.67□□□□□ -0.06
CAV1-201ENST00000341049 FAM9AQ8IZU1 332 aaPredicted RBP14.63□□□□□ -0.07
CAV1-201ENST00000341049 TRIM41Q8WV44 630 aa14.54□□□□□ -0.08
CAV1-201ENST00000341049 NEUROD1Q13562 356 aa14.51□□□□□ -0.09
CAV1-201ENST00000341049 ACIN1Q9UKV3 1341 aaKnown RBP14.51□□□□□ -0.09
CAV1-201ENST00000341049 MYT1Q01538 1121 aa14.49□□□□□ -0.09
CAV1-201ENST00000341049 GTF3C3Q9Y5Q9 886 aa14.43□□□□□ -0.1
CAV1-201ENST00000341049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.37□□□□□ -0.11
CAV1-201ENST00000341049 CCER1Q8TC90 406 aaPredicted RBP14.33□□□□□ -0.12
CAV1-201ENST00000341049 RSF1Q96T23 1441 aaPredicted RBP14.29□□□□□ -0.12
CAV1-201ENST00000341049 CENPBP07199 599 aaPredicted RBP14.28□□□□□ -0.12
CAV1-201ENST00000341049 TTBK1Q5TCY1 1321 aaPredicted RBP14.26□□□□□ -0.13
CAV1-201ENST00000341049 DIEXFQ68CQ4 756 aaKnown RBP14.26□□□□□ -0.13
CAV1-201ENST00000341049 ABCC9O60706 1549 aa14.25□□□□□ -0.13
CAV1-201ENST00000341049 RB1CC1Q8TDY2 1594 aa14.21□□□□□ -0.13
CAV1-201ENST00000341049 SCRIBQ14160 1630 aa14.17□□□□□ -0.14
CAV1-201ENST00000341049 YTHDC1Q96MU7 727 aaKnown RBP14.1□□□□□ -0.15
CAV1-201ENST00000341049 PHF23Q9BUL5 403 aaPredicted RBP14□□□□□ -0.17
CAV1-201ENST00000341049 CECR2Q9BXF3 1484 aa13.98□□□□□ -0.17
CAV1-201ENST00000341049 ZNF316A6NFI3 1004 aaPredicted RBP13.95□□□□□ -0.18
CAV1-201ENST00000341049 MROH2BQ7Z745 1585 aa13.91□□□□□ -0.18
CAV1-201ENST00000341049 MIER1Q8N108 512 aa13.91□□□□□ -0.18
CAV1-201ENST00000341049 UBTFP17480 764 aaKnown RBP13.86□□□□□ -0.19
CAV1-201ENST00000341049 WIZO95785 1651 aa13.85□□□□□ -0.19
CAV1-201ENST00000341049 HNRNPUL2Q1KMD3 747 aaKnown RBP13.84□□□□□ -0.19
CAV1-201ENST00000341049 CEP162Q5TB80 1403 aa13.83□□□□□ -0.2
CAV1-201ENST00000341049 CCDC88BA6NC98 1476 aa13.78□□□□□ -0.2
CAV1-201ENST00000341049 ABCC8Q09428 1581 aa13.78□□□□□ -0.2
CAV1-201ENST00000341049 WRNQ14191 1432 aaPredicted RBP eCLIP13.77□□□□□ -0.21
CAV1-201ENST00000341049 SOGA1O94964 1423 aa13.76□□□□□ -0.21
CAV1-201ENST00000341049 SENP3Q9H4L4 574 aaPredicted RBP13.74□□□□□ -0.21
CAV1-201ENST00000341049 CSRNP3Q8WYN3 585 aa13.72□□□□□ -0.21
CAV1-201ENST00000341049 BCL11AQ9H165 835 aa13.71□□□□□ -0.21
CAV1-201ENST00000341049 SUPT16HQ9Y5B9 1047 aaKnown RBP13.71□□□□□ -0.21
CAV1-201ENST00000341049 TNIKQ9UKE5 1360 aa13.71□□□□□ -0.22
CAV1-201ENST00000341049 RANGAP1P46060 587 aaPredicted RBP13.7□□□□□ -0.22
CAV1-201ENST00000341049 ANP32EQ9BTT0 268 aa13.68□□□□□ -0.22
CAV1-201ENST00000341049 RUSC2Q8N2Y8 1516 aa13.67□□□□□ -0.22
CAV1-201ENST00000341049 BAZ1AQ9NRL2 1556 aaPredicted RBP13.66□□□□□ -0.22
CAV1-201ENST00000341049 TSHZ2Q9NRE2 1034 aa13.66□□□□□ -0.22
CAV1-201ENST00000341049 EIF4G1Q04637 1599 aaKnown RBP13.64□□□□□ -0.23
CAV1-201ENST00000341049 APLP2Q06481 763 aa13.61□□□□□ -0.23
CAV1-201ENST00000341049 NACADO15069 1562 aa13.59□□□□□ -0.23
CAV1-201ENST00000341049 GOLGA3Q08378 1498 aa13.56□□□□□ -0.24
CAV1-201ENST00000341049 CLSPNQ9HAW4 1339 aa13.55□□□□□ -0.24
CAV1-201ENST00000341049 EEA1Q15075 1411 aa13.53□□□□□ -0.24
CAV1-201ENST00000341049 TOP2AP11388 1531 aaKnown RBP13.52□□□□□ -0.25
CAV1-201ENST00000341049 CLIP1P30622 1438 aa13.5□□□□□ -0.25
CAV1-201ENST00000341049 SMARCA2P51531 1590 aa13.5□□□□□ -0.25
CAV1-201ENST00000341049 BCANQ96GW7 911 aa13.47□□□□□ -0.25
CAV1-201ENST00000341049 VPS8Q8N3P4 1428 aa13.43□□□□□ -0.26
CAV1-201ENST00000341049 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
CAV1-201ENST00000341049 SMARCA4P51532 1647 aa13.41□□□□□ -0.26
CAV1-201ENST00000341049 KCNH8Q96L42 1107 aa13.41□□□□□ -0.26
CAV1-201ENST00000341049 ITGAEP38570 1179 aa13.39□□□□□ -0.27
CAV1-201ENST00000341049 DHX57Q6P158 1386 aaKnown RBP13.39□□□□□ -0.27
CAV1-201ENST00000341049 RAPGEF2Q9Y4G8 1499 aa13.36□□□□□ -0.27
CAV1-201ENST00000341049 FKBP8Q14318 412 aa13.35□□□□□ -0.27
CAV1-201ENST00000341049 PABPN1Q86U42 306 aaKnown RBP eCLIP13.35□□□□□ -0.27
CAV1-201ENST00000341049 KANK4Q5T7N3 995 aaPredicted RBP13.33□□□□□ -0.27
CAV1-201ENST00000341049 RBM19Q9Y4C8 960 aaKnown RBP13.33□□□□□ -0.27
CAV1-201ENST00000341049 SYNJ1O43426 1573 aa13.31□□□□□ -0.28
CAV1-201ENST00000341049 KIF21BO75037 1637 aa13.29□□□□□ -0.28
CAV1-201ENST00000341049 DDX10Q13206 875 aaKnown RBP13.26□□□□□ -0.29
CAV1-201ENST00000341049 MSH5O43196 834 aa13.25□□□□□ -0.29
CAV1-201ENST00000341049 BAZ1BQ9UIG0 1483 aaKnown RBP13.23□□□□□ -0.29
CAV1-201ENST00000341049 HIRIP3Q9BW71 556 aaPredicted RBP13.22□□□□□ -0.29
CAV1-201ENST00000341049 TRIM52Q96A61 297 aa13.21□□□□□ -0.29
CAV1-201ENST00000341049 NEFLP07196 543 aa13.2□□□□□ -0.3
CAV1-201ENST00000341049 SIN3AQ96ST3 1273 aa13.16□□□□□ -0.3
CAV1-201ENST00000341049 CCNB3Q8WWL7 1395 aa13.16□□□□□ -0.3
CAV1-201ENST00000341049 ARAP1Q96P48 1450 aa13.15□□□□□ -0.3
CAV1-201ENST00000341049 PRKCSHP14314 528 aaPredicted RBP13.13□□□□□ -0.31
CAV1-201ENST00000341049 RAB3GAP2Q9H2M9 1393 aa13.13□□□□□ -0.31
CAV1-201ENST00000341049 UNC13AQ9UPW8 1703 aa13.12□□□□□ -0.31
CAV1-201ENST00000341049 RRBP1Q9P2E9 1410 aaKnown RBP13.12□□□□□ -0.31
CAV1-201ENST00000341049 FAM50AQ14320 339 aaKnown RBP13.1□□□□□ -0.31
CAV1-201ENST00000341049 ANP32CO43423 234 aa13.08□□□□□ -0.32
CAV1-201ENST00000341049 ATP1B4Q9UN42 357 aaPredicted RBP13.07□□□□□ -0.32
CAV1-201ENST00000341049 ERICH6Q7L0X2 663 aa13.07□□□□□ -0.32
CAV1-201ENST00000341049 IRX6P78412 446 aaPredicted RBP13.06□□□□□ -0.32
CAV1-201ENST00000341049 PRXQ9BXM0 1461 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms