RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
HCG18-244ENST00000602516 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
HCG18-244ENST00000602516 NISCHQ9Y2I1 1504 aa15.54■□□□□ 0.08
HCG18-244ENST00000602516 PHF23Q9BUL5 403 aaPredicted RBP15.29■□□□□ 0.04
HCG18-244ENST00000602516 SENP3Q9H4L4 574 aaPredicted RBP14.32□□□□□ -0.12
HCG18-244ENST00000602516 PLPPR3Q6T4P5 718 aa13.98□□□□□ -0.17
HCG18-244ENST00000602516 PELP1Q8IZL8 1130 aaKnown RBP13.86□□□□□ -0.19
HCG18-244ENST00000602516 MYT1Q01538 1121 aa13.81□□□□□ -0.2
HCG18-244ENST00000602516 SLC24A1O60721 1099 aa13.8□□□□□ -0.2
HCG18-244ENST00000602516 ADRA2BP18089 450 aa13.55□□□□□ -0.24
HCG18-244ENST00000602516 TTBK1Q5TCY1 1321 aaPredicted RBP13.51□□□□□ -0.25
HCG18-244ENST00000602516 FOXD1Q16676 465 aa13.5□□□□□ -0.25
HCG18-244ENST00000602516 PPP6R1Q9UPN7 881 aa13.49□□□□□ -0.25
HCG18-244ENST00000602516 PRKCSHP14314 528 aaPredicted RBP13.42□□□□□ -0.26
HCG18-244ENST00000602516 CCDC180Q9P1Z9 1646 aa13.39□□□□□ -0.27
HCG18-244ENST00000602516 APLP2Q06481 763 aa13.21□□□□□ -0.3
HCG18-244ENST00000602516 ZCCHC6Q5VYS8 1495 aaKnown RBP13.13□□□□□ -0.31
HCG18-244ENST00000602516 ERICH6Q7L0X2 663 aa13.05□□□□□ -0.32
HCG18-244ENST00000602516 DAXXQ9UER7 740 aaPredicted RBP12.98□□□□□ -0.33
HCG18-244ENST00000602516 KCNA4P22459 653 aa12.89□□□□□ -0.35
HCG18-244ENST00000602516 SHROOM4Q9ULL8 1493 aa12.88□□□□□ -0.35
HCG18-244ENST00000602516 DCAF1Q9Y4B6 1507 aa12.85□□□□□ -0.35
HCG18-244ENST00000602516 PIAS4Q8N2W9 510 aaPredicted RBP12.85□□□□□ -0.35
HCG18-244ENST00000602516 ABCC9O60706 1549 aa12.82□□□□□ -0.36
HCG18-244ENST00000602516 EHMT2Q96KQ7 1210 aa12.67□□□□□ -0.38
HCG18-244ENST00000602516 DCAF8L2P0C7V8 631 aa12.67□□□□□ -0.38
HCG18-244ENST00000602516 BCL11AQ9H165 835 aa12.6□□□□□ -0.39
HCG18-244ENST00000602516 MYO15BQ96JP2 1530 aa12.58□□□□□ -0.4
HCG18-244ENST00000602516 SUPT5HO00267 1087 aaKnown RBP12.55□□□□□ -0.4
HCG18-244ENST00000602516 PPP4R3CPQ6ZMV5 832 aa12.5□□□□□ -0.41
HCG18-244ENST00000602516 FAM9AQ8IZU1 332 aaPredicted RBP12.44□□□□□ -0.42
HCG18-244ENST00000602516 NACADO15069 1562 aa12.39□□□□□ -0.43
HCG18-244ENST00000602516 EIF5BO60841 1220 aaKnown RBP12.36□□□□□ -0.43
HCG18-244ENST00000602516 RB1CC1Q8TDY2 1594 aa12.36□□□□□ -0.43
HCG18-244ENST00000602516 SCRIBQ14160 1630 aa12.36□□□□□ -0.43
HCG18-244ENST00000602516 NCBP3Q53F19 620 aaKnown RBP12.2□□□□□ -0.46
HCG18-244ENST00000602516 MAPK8IP2Q13387 824 aaPredicted RBP12.19□□□□□ -0.46
HCG18-244ENST00000602516 RSF1Q96T23 1441 aaPredicted RBP12.19□□□□□ -0.46
HCG18-244ENST00000602516 SLC4A1APQ9BWU0 796 aaKnown RBP12.18□□□□□ -0.46
HCG18-244ENST00000602516 NPM3O75607 178 aaKnown RBP12.17□□□□□ -0.46
HCG18-244ENST00000602516 PLEKHG5O94827 1062 aa12.15□□□□□ -0.46
HCG18-244ENST00000602516 SCAF1Q9H7N4 1312 aaKnown RBP12.14□□□□□ -0.47
HCG18-244ENST00000602516 CSRNP3Q8WYN3 585 aa12.08□□□□□ -0.47
HCG18-244ENST00000602516 UNC13AQ9UPW8 1703 aa12.06□□□□□ -0.48
HCG18-244ENST00000602516 CECR2Q9BXF3 1484 aa12.06□□□□□ -0.48
HCG18-244ENST00000602516 MROH2BQ7Z745 1585 aa12.03□□□□□ -0.48
HCG18-244ENST00000602516 HRCP23327 699 aa11.99□□□□□ -0.49
HCG18-244ENST00000602516 BICRAQ9NZM4 1560 aa11.98□□□□□ -0.49
HCG18-244ENST00000602516 PABPN1Q86U42 306 aaKnown RBP eCLIP11.97□□□□□ -0.49
HCG18-244ENST00000602516 BAZ1AQ9NRL2 1556 aaPredicted RBP11.96□□□□□ -0.5
HCG18-244ENST00000602516 WIZO95785 1651 aa11.96□□□□□ -0.5
HCG18-244ENST00000602516 MSH5O43196 834 aa11.95□□□□□ -0.5
HCG18-244ENST00000602516 ZBTB22O15209 634 aa11.93□□□□□ -0.5
HCG18-244ENST00000602516 RTN4Q9NQC3 1192 aaKnown RBP11.92□□□□□ -0.5
HCG18-244ENST00000602516 ARXQ96QS3 562 aa11.9□□□□□ -0.5
HCG18-244ENST00000602516 CNKSR2Q8WXI2 1034 aa11.89□□□□□ -0.51
HCG18-244ENST00000602516 SMARCA4P51532 1647 aa11.88□□□□□ -0.51
HCG18-244ENST00000602516 KLHL34Q8N239 644 aa11.85□□□□□ -0.51
HCG18-244ENST00000602516 UBE2Q2Q8WVN8 375 aa11.83□□□□□ -0.52
HCG18-244ENST00000602516 CENPBP07199 599 aaPredicted RBP11.82□□□□□ -0.52
HCG18-244ENST00000602516 PODXL2Q9NZ53 605 aa11.82□□□□□ -0.52
HCG18-244ENST00000602516 TOP2AP11388 1531 aaKnown RBP11.82□□□□□ -0.52
HCG18-244ENST00000602516 TIMELESSQ9UNS1 1208 aa11.81□□□□□ -0.52
HCG18-244ENST00000602516 EIF4G1Q04637 1599 aaKnown RBP11.8□□□□□ -0.52
HCG18-244ENST00000602516 TRIM41Q8WV44 630 aa11.77□□□□□ -0.52
HCG18-244ENST00000602516 LOC105371045A0A1W2PR82 267 aa11.77□□□□□ -0.53
HCG18-244ENST00000602516 PEG3Q9GZU2 1588 aa11.74□□□□□ -0.53
HCG18-244ENST00000602516 SMARCA2P51531 1590 aa11.73□□□□□ -0.53
HCG18-244ENST00000602516 RANGAP1P46060 587 aaPredicted RBP11.73□□□□□ -0.53
HCG18-244ENST00000602516 DNAJC5BQ9UF47 199 aa11.72□□□□□ -0.53
HCG18-244ENST00000602516 CCDC88BA6NC98 1476 aa11.72□□□□□ -0.53
HCG18-244ENST00000602516 ANO8Q9HCE9 1232 aaPredicted RBP11.63□□□□□ -0.55
HCG18-244ENST00000602516 ANP32EQ9BTT0 268 aa11.6□□□□□ -0.55
HCG18-244ENST00000602516 CC2D2AQ9P2K1 1620 aa11.6□□□□□ -0.55
HCG18-244ENST00000602516 ATAD2BQ9ULI0 1458 aa11.59□□□□□ -0.55
HCG18-244ENST00000602516 ABCC8Q09428 1581 aa11.57□□□□□ -0.56
HCG18-244ENST00000602516 PCGF6Q9BYE7 350 aa11.56□□□□□ -0.56
HCG18-244ENST00000602516 PKNOX2Q96KN3 472 aa11.55□□□□□ -0.56
HCG18-244ENST00000602516 PPARGC1BQ86YN6 1023 aaKnown RBP11.54□□□□□ -0.56
HCG18-244ENST00000602516 RNF216Q9NWF9 866 aaPredicted RBP11.53□□□□□ -0.56
HCG18-244ENST00000602516 BAZ1BQ9UIG0 1483 aaKnown RBP11.52□□□□□ -0.56
HCG18-244ENST00000602516 DMRT2Q9Y5R5 561 aa11.51□□□□□ -0.57
HCG18-244ENST00000602516 TULP1O00294 542 aaPredicted RBP11.5□□□□□ -0.57
HCG18-244ENST00000602516 PDIA4P13667 645 aaKnown RBP11.49□□□□□ -0.57
HCG18-244ENST00000602516 TRIM26Q12899 539 aaPredicted RBP11.48□□□□□ -0.57
HCG18-244ENST00000602516 FOXD4L1Q9NU39 408 aa11.47□□□□□ -0.57
HCG18-244ENST00000602516 HOMEZQ8IX15 550 aa11.46□□□□□ -0.57
HCG18-244ENST00000602516 HMGXB3Q12766 1538 aa11.45□□□□□ -0.58
HCG18-244ENST00000602516 EEA1Q15075 1411 aa11.44□□□□□ -0.58
HCG18-244ENST00000602516 SLC4A2P04920 1241 aa11.44□□□□□ -0.58
HCG18-244ENST00000602516 WRNQ14191 1432 aaPredicted RBP eCLIP11.44□□□□□ -0.58
HCG18-244ENST00000602516 NCAPD3P42695 1498 aa11.44□□□□□ -0.58
HCG18-244ENST00000602516 SOGA1O94964 1423 aa11.42□□□□□ -0.58
HCG18-244ENST00000602516 SYNJ1O43426 1573 aa11.41□□□□□ -0.58
HCG18-244ENST00000602516 DCAF8L1A6NGE4 600 aa11.4□□□□□ -0.58
HCG18-244ENST00000602516 ACIN1Q9UKV3 1341 aaKnown RBP11.39□□□□□ -0.59
HCG18-244ENST00000602516 PDE4CQ08493 712 aa11.39□□□□□ -0.59
HCG18-244ENST00000602516 HOXD11P31277 338 aaPredicted RBP11.38□□□□□ -0.59
HCG18-244ENST00000602516 RUSC2Q8N2Y8 1516 aa11.38□□□□□ -0.59
HCG18-244ENST00000602516 AMER1Q5JTC6 1135 aaPredicted RBP11.37□□□□□ -0.59
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