Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MRRFP1-201ENST00000435941 1675 ntBASIC8.64□□□□□ -1.03
RXRBP28702 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC8.64□□□□□ -1.03
RXRBP28702 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RXRBP28702 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
RXRBP28702 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC8.64□□□□□ -1.03
RXRBP28702 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
RXRBP28702 USP40-202ENST00000409945 1946 ntTSL 2 BASIC8.64□□□□□ -1.03
RXRBP28702 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
RXRBP28702 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RXRBP28702 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RXRBP28702 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC8.64□□□□□ -1.03
RXRBP28702 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
RXRBP28702 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RXRBP28702 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC8.63□□□□□ -1.03
RXRBP28702 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC8.63□□□□□ -1.03
RXRBP28702 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC8.63□□□□□ -1.03
RXRBP28702 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC8.63□□□□□ -1.03
RXRBP28702 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RXRBP28702 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RXRBP28702 RPL5P20-201ENST00000403848 896 ntBASIC8.63□□□□□ -1.03
RXRBP28702 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC8.63□□□□□ -1.03
RXRBP28702 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC8.63□□□□□ -1.03
RXRBP28702 NPM1P4-201ENST00000414095 812 ntBASIC8.63□□□□□ -1.03
RXRBP28702 AL359092.1-201ENST00000417156 265 ntBASIC8.63□□□□□ -1.03
RXRBP28702 MTCO2P21-201ENST00000419780 677 ntBASIC8.63□□□□□ -1.03
RXRBP28702 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC8.63□□□□□ -1.03
RXRBP28702 FABP7P2-201ENST00000429946 379 ntBASIC8.63□□□□□ -1.03
RXRBP28702 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC8.63□□□□□ -1.03
RXRBP28702 SUMO2P3-201ENST00000438311 288 ntBASIC8.63□□□□□ -1.03
RXRBP28702 AL691517.1-201ENST00000440833 1235 ntBASIC8.63□□□□□ -1.03
RXRBP28702 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC8.63□□□□□ -1.03
RXRBP28702 AL645937.3-201ENST00000453647 936 ntBASIC8.63□□□□□ -1.03
RXRBP28702 RN7SL834P-201ENST00000461450 286 ntBASIC8.63□□□□□ -1.03
RXRBP28702 AC024451.1-201ENST00000508013 779 ntBASIC8.63□□□□□ -1.03
RXRBP28702 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RXRBP28702 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RXRBP28702 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC8.63□□□□□ -1.03
RXRBP28702 ZNF322P1-201ENST00000568013 1209 ntBASIC8.63□□□□□ -1.03
RXRBP28702 MIR3135A-201ENST00000578460 77 ntBASIC8.63□□□□□ -1.03
RXRBP28702 AC104695.2-201ENST00000605056 775 ntBASIC8.63□□□□□ -1.03
RXRBP28702 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC8.63□□□□□ -1.03
RXRBP28702 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC8.63□□□□□ -1.03
RXRBP28702 AC092140.2-201ENST00000618027 521 ntBASIC8.63□□□□□ -1.03
RXRBP28702 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC8.63□□□□□ -1.03
RXRBP28702 SAMMSON-227ENST00000642114 1199 ntBASIC8.63□□□□□ -1.03
RXRBP28702 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC8.63□□□□□ -1.03
RXRBP28702 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RXRBP28702 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RXRBP28702 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RXRBP28702 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.63□□□□□ -1.03
RXRBP28702 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC8.63□□□□□ -1.03
RXRBP28702 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC8.62□□□□□ -1.03
RXRBP28702 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RXRBP28702 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RXRBP28702 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
RXRBP28702 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC8.62□□□□□ -1.03
RXRBP28702 AC020978.8-201ENST00000571975 3022 ntBASIC8.62□□□□□ -1.03
RXRBP28702 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RXRBP28702 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC8.62□□□□□ -1.03
RXRBP28702 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
RXRBP28702 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC8.62□□□□□ -1.03
RXRBP28702 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
RXRBP28702 AC125603.4-201ENST00000621942 2699 ntBASIC8.62□□□□□ -1.03
RXRBP28702 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
RXRBP28702 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RXRBP28702 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
RXRBP28702 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RXRBP28702 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
RXRBP28702 AC122713.2-201ENST00000624942 3335 ntBASIC8.62□□□□□ -1.03
RXRBP28702 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RXRBP28702 Y_RNA.318-201ENST00000365131 97 ntBASIC8.62□□□□□ -1.03
RXRBP28702 RN7SKP161-201ENST00000411110 305 ntBASIC8.62□□□□□ -1.03
RXRBP28702 RN7SKP296-201ENST00000411185 341 ntBASIC8.62□□□□□ -1.03
RXRBP28702 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC8.62□□□□□ -1.03
RXRBP28702 AC130360.1-201ENST00000425489 1117 ntBASIC8.62□□□□□ -1.03
RXRBP28702 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC8.62□□□□□ -1.03
RXRBP28702 NDUFS5P5-201ENST00000437256 321 ntBASIC8.62□□□□□ -1.03
RXRBP28702 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC8.62□□□□□ -1.03
RXRBP28702 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC8.62□□□□□ -1.03
RXRBP28702 DUXAP8-207ENST00000456786 622 ntBASIC8.62□□□□□ -1.03
RXRBP28702 RN7SL329P-201ENST00000467740 299 ntBASIC8.62□□□□□ -1.03
RXRBP28702 RN7SL466P-201ENST00000497546 295 ntBASIC8.62□□□□□ -1.03
RXRBP28702 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC8.62□□□□□ -1.03
RXRBP28702 AC130365.2-201ENST00000525882 1201 ntBASIC8.62□□□□□ -1.03
RXRBP28702 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC8.62□□□□□ -1.03
RXRBP28702 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RXRBP28702 MTND2P17-201ENST00000550281 688 ntBASIC8.62□□□□□ -1.03
RXRBP28702 GNG2-208ENST00000554875 430 ntTSL 5 BASIC8.62□□□□□ -1.03
RXRBP28702 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC8.62□□□□□ -1.03
RXRBP28702 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
RXRBP28702 AC234775.3-201ENST00000564612 656 ntBASIC8.62□□□□□ -1.03
RXRBP28702 AC025171.4-201ENST00000607250 1047 ntBASIC8.62□□□□□ -1.03
RXRBP28702 DUXAP10-204ENST00000612052 616 ntBASIC8.62□□□□□ -1.03
RXRBP28702 AC005156.1-201ENST00000613371 573 ntBASIC8.62□□□□□ -1.03
RXRBP28702 AL162233.1-201ENST00000620014 944 ntBASIC8.62□□□□□ -1.03
RXRBP28702 AC105105.5-201ENST00000622635 1294 ntBASIC8.62□□□□□ -1.03
RXRBP28702 AC126544.2-201ENST00000625174 749 ntBASIC8.62□□□□□ -1.03
RXRBP28702 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC8.62□□□□□ -1.03
RXRBP28702 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
RXRBP28702 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms