RNA–Protein interactions for RNA: ENST00000642114.1

SAMMSON-227, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,199 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-227ENST00000642114 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
SAMMSON-227ENST00000642114 CHIC1Q5VXU3 224 aa21.83■■□□□ 1.09
SAMMSON-227ENST00000642114 SENP3Q9H4L4 574 aaPredicted RBP19.68■□□□□ 0.74
SAMMSON-227ENST00000642114 PHF23Q9BUL5 403 aaPredicted RBP19.4■□□□□ 0.7
SAMMSON-227ENST00000642114 FOXD1Q16676 465 aa18.3■□□□□ 0.52
SAMMSON-227ENST00000642114 PLPPR3Q6T4P5 718 aa17.47■□□□□ 0.39
SAMMSON-227ENST00000642114 MSH5O43196 834 aa17.19■□□□□ 0.34
SAMMSON-227ENST00000642114 PIAS4Q8N2W9 510 aaPredicted RBP17.14■□□□□ 0.33
SAMMSON-227ENST00000642114 PPP6R1Q9UPN7 881 aa17.07■□□□□ 0.32
SAMMSON-227ENST00000642114 ADRA2BP18089 450 aa17.05■□□□□ 0.32
SAMMSON-227ENST00000642114 POTEDQ86YR6 584 aa16.77■□□□□ 0.28
SAMMSON-227ENST00000642114 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
SAMMSON-227ENST00000642114 MAPK8IP2Q13387 824 aaPredicted RBP15.66■□□□□ 0.1
SAMMSON-227ENST00000642114 DMRT2Q9Y5R5 561 aa15.57■□□□□ 0.08
SAMMSON-227ENST00000642114 PPP4R3CPQ6ZMV5 832 aa15.3■□□□□ 0.04
SAMMSON-227ENST00000642114 CNKSR2Q8WXI2 1034 aa15.03■□□□□ -0
SAMMSON-227ENST00000642114 DCAF8L1A6NGE4 600 aa15.02■□□□□ -0
SAMMSON-227ENST00000642114 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
SAMMSON-227ENST00000642114 RNF216Q9NWF9 866 aaPredicted RBP14.88□□□□□ -0.03
SAMMSON-227ENST00000642114 CACNB1Q02641 598 aaPredicted RBP14.78□□□□□ -0.04
SAMMSON-227ENST00000642114 NCBP3Q53F19 620 aaKnown RBP14.75□□□□□ -0.05
SAMMSON-227ENST00000642114 RNF39Q9H2S5 420 aa14.62□□□□□ -0.07
SAMMSON-227ENST00000642114 NPM3O75607 178 aaKnown RBP14.48□□□□□ -0.09
SAMMSON-227ENST00000642114 DNAJC5BQ9UF47 199 aa14.47□□□□□ -0.09
SAMMSON-227ENST00000642114 C1QBPQ07021 282 aaKnown RBP14.44□□□□□ -0.1
SAMMSON-227ENST00000642114 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.34□□□□□ -0.11
SAMMSON-227ENST00000642114 KCNA4P22459 653 aa14.18□□□□□ -0.14
SAMMSON-227ENST00000642114 U3KPZ7 1027 aaPredicted RBP13.97□□□□□ -0.17
SAMMSON-227ENST00000642114 CAPN15O75808 1086 aa13.82□□□□□ -0.2
SAMMSON-227ENST00000642114 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
SAMMSON-227ENST00000642114 NISCHQ9Y2I1 1504 aa13.8□□□□□ -0.2
SAMMSON-227ENST00000642114 SPINK5Q9NQ38 1064 aaPredicted RBP13.79□□□□□ -0.2
SAMMSON-227ENST00000642114 DSG3P32926 999 aa13.69□□□□□ -0.22
SAMMSON-227ENST00000642114 APLP2Q06481 763 aa13.68□□□□□ -0.22
SAMMSON-227ENST00000642114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.64□□□□□ -0.23
SAMMSON-227ENST00000642114 HNRNPUL2Q1KMD3 747 aaKnown RBP13.64□□□□□ -0.23
SAMMSON-227ENST00000642114 TRHP20396 242 aaPredicted RBP13.6□□□□□ -0.23
SAMMSON-227ENST00000642114 ZNF219Q9P2Y4 722 aaPredicted RBP13.56□□□□□ -0.24
SAMMSON-227ENST00000642114 SAMD1Q6SPF0 538 aaPredicted RBP13.55□□□□□ -0.24
SAMMSON-227ENST00000642114 ABCB7O75027 752 aa13.47□□□□□ -0.25
SAMMSON-227ENST00000642114 MYCNP04198 464 aaPredicted RBP13.42□□□□□ -0.26
SAMMSON-227ENST00000642114 SLC4A1APQ9BWU0 796 aaKnown RBP13.42□□□□□ -0.26
SAMMSON-227ENST00000642114 FOXD4L1Q9NU39 408 aa13.27□□□□□ -0.29
SAMMSON-227ENST00000642114 POLA2Q14181 598 aa13.2□□□□□ -0.3
SAMMSON-227ENST00000642114 POTEHQ6S545 545 aa13.16□□□□□ -0.3
SAMMSON-227ENST00000642114 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
SAMMSON-227ENST00000642114 ATF5Q9Y2D1 282 aaPredicted RBP13.06□□□□□ -0.32
SAMMSON-227ENST00000642114 ZBTB22O15209 634 aa12.99□□□□□ -0.33
SAMMSON-227ENST00000642114 ZBTB12Q9Y330 459 aaPredicted RBP12.96□□□□□ -0.33
SAMMSON-227ENST00000642114 ATXN8OSP0DMR3 200 aa12.86□□□□□ -0.35
SAMMSON-227ENST00000642114 ABCC9O60706 1549 aa12.85□□□□□ -0.35
SAMMSON-227ENST00000642114 CHRDL2Q6WN34 429 aa12.81□□□□□ -0.36
SAMMSON-227ENST00000642114 AKT1S1Q96B36 256 aa12.79□□□□□ -0.36
SAMMSON-227ENST00000642114 OSCARQ8IYS5 282 aa12.77□□□□□ -0.37
SAMMSON-227ENST00000642114 REM2Q8IYK8 340 aaPredicted RBP12.66□□□□□ -0.38
SAMMSON-227ENST00000642114 FBLN2P98095 1184 aa12.65□□□□□ -0.38
SAMMSON-227ENST00000642114 CCDC180Q9P1Z9 1646 aa12.56□□□□□ -0.4
SAMMSON-227ENST00000642114 SPDYE2BA6NHP3 402 aa12.54□□□□□ -0.4
SAMMSON-227ENST00000642114 SPDYE6P0CI01 402 aa12.54□□□□□ -0.4
SAMMSON-227ENST00000642114 SPDYE2Q495Y8 402 aa12.54□□□□□ -0.4
SAMMSON-227ENST00000642114 PITPNM1O00562 1244 aa12.51□□□□□ -0.41
SAMMSON-227ENST00000642114 PIP4P2Q8N4L2 257 aa12.48□□□□□ -0.41
SAMMSON-227ENST00000642114 MKRN4PQ13434 485 aaPredicted RBP12.46□□□□□ -0.41
SAMMSON-227ENST00000642114 FXR2P51116 673 aaKnown RBP eCLIP12.4□□□□□ -0.42
SAMMSON-227ENST00000642114 CSRNP3Q8WYN3 585 aa12.4□□□□□ -0.42
SAMMSON-227ENST00000642114 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.42
SAMMSON-227ENST00000642114 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
SAMMSON-227ENST00000642114 CLEC11AQ9Y240 323 aa12.34□□□□□ -0.43
SAMMSON-227ENST00000642114 SP7Q8TDD2 431 aaPredicted RBP12.33□□□□□ -0.44
SAMMSON-227ENST00000642114 SSUH2Q9Y2M2 353 aa12.33□□□□□ -0.44
SAMMSON-227ENST00000642114 HAX1O00165 279 aa12.32□□□□□ -0.44
SAMMSON-227ENST00000642114 EHMT2Q96KQ7 1210 aa12.28□□□□□ -0.44
SAMMSON-227ENST00000642114 PRKAR2AP13861 404 aaKnown RBP12.22□□□□□ -0.45
SAMMSON-227ENST00000642114 PABPN1Q86U42 306 aaKnown RBP eCLIP12.2□□□□□ -0.46
SAMMSON-227ENST00000642114 RB1CC1Q8TDY2 1594 aa12.14□□□□□ -0.47
SAMMSON-227ENST00000642114 PRR29P0C7W0 189 aa12.12□□□□□ -0.47
SAMMSON-227ENST00000642114 EVX2Q03828 476 aa12.08□□□□□ -0.48
SAMMSON-227ENST00000642114 CHADLQ6NUI6 762 aa12.06□□□□□ -0.48
SAMMSON-227ENST00000642114 C19orf67A6NJJ6 358 aa12□□□□□ -0.49
SAMMSON-227ENST00000642114 NACADO15069 1562 aa11.99□□□□□ -0.49
SAMMSON-227ENST00000642114 SPDYE4A6NLX3 237 aa11.91□□□□□ -0.5
SAMMSON-227ENST00000642114 STAG3Q9UJ98 1225 aa11.89□□□□□ -0.51
SAMMSON-227ENST00000642114 FARP1Q9Y4F1 1045 aaPredicted RBP11.88□□□□□ -0.51
SAMMSON-227ENST00000642114 GABBR2O75899 941 aa11.85□□□□□ -0.51
SAMMSON-227ENST00000642114 CD44P16070 742 aaKnown RBP11.83□□□□□ -0.52
SAMMSON-227ENST00000642114 MYO15BQ96JP2 1530 aa11.76□□□□□ -0.53
SAMMSON-227ENST00000642114 CREBZFQ9NS37 354 aa11.76□□□□□ -0.53
SAMMSON-227ENST00000642114 BICRAQ9NZM4 1560 aa11.73□□□□□ -0.53
SAMMSON-227ENST00000642114 SHROOM4Q9ULL8 1493 aa11.73□□□□□ -0.53
SAMMSON-227ENST00000642114 DCAF8L2P0C7V8 631 aa11.72□□□□□ -0.53
SAMMSON-227ENST00000642114 CLCN6P51797 869 aa11.69□□□□□ -0.54
SAMMSON-227ENST00000642114 UNC13AQ9UPW8 1703 aa11.67□□□□□ -0.54
SAMMSON-227ENST00000642114 DNAJC5Q9H3Z4 198 aa11.67□□□□□ -0.54
SAMMSON-227ENST00000642114 ZRANB1Q9UGI0 708 aa11.67□□□□□ -0.54
SAMMSON-227ENST00000642114 CECR2Q9BXF3 1484 aa11.66□□□□□ -0.54
SAMMSON-227ENST00000642114 PAK3O75914 559 aaPredicted RBP11.62□□□□□ -0.55
SAMMSON-227ENST00000642114 NPM1P06748 294 aaKnown RBP eCLIP11.62□□□□□ -0.55
SAMMSON-227ENST00000642114 ZNF579Q8NAF0 562 aaKnown RBP11.62□□□□□ -0.55
SAMMSON-227ENST00000642114 CC2D2AQ9P2K1 1620 aa11.58□□□□□ -0.56
SAMMSON-227ENST00000642114 LHX8Q68G74 356 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms