RNA–Protein interactions for RNA: ENST00000441892.6

CDH17-202, Transcript of cadherin 17, humanhuman

TSL 2 BASIC

Gene CDH17, Length 2,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-202ENST00000441892 CHIC1Q5VXU3 224 aa16.6■□□□□ 0.25
CDH17-202ENST00000441892 AEBP2Q6ZN18 517 aaPredicted RBP16.3■□□□□ 0.2
CDH17-202ENST00000441892 NISCHQ9Y2I1 1504 aa15.12■□□□□ 0.01
CDH17-202ENST00000441892 PHF23Q9BUL5 403 aaPredicted RBP14.94□□□□□ -0.02
CDH17-202ENST00000441892 PLPPR3Q6T4P5 718 aa13.8□□□□□ -0.2
CDH17-202ENST00000441892 EHMT2Q96KQ7 1210 aa13.72□□□□□ -0.21
CDH17-202ENST00000441892 PELP1Q8IZL8 1130 aaKnown RBP13.7□□□□□ -0.22
CDH17-202ENST00000441892 HRCP23327 699 aa13.49□□□□□ -0.25
CDH17-202ENST00000441892 KCNA4P22459 653 aa13.4□□□□□ -0.26
CDH17-202ENST00000441892 CCDC180Q9P1Z9 1646 aa13.34□□□□□ -0.27
CDH17-202ENST00000441892 MYT1Q01538 1121 aa13.33□□□□□ -0.27
CDH17-202ENST00000441892 ADRA2BP18089 450 aa13.29□□□□□ -0.28
CDH17-202ENST00000441892 SENP3Q9H4L4 574 aaPredicted RBP13.29□□□□□ -0.28
CDH17-202ENST00000441892 CSRNP3Q8WYN3 585 aa13.08□□□□□ -0.32
CDH17-202ENST00000441892 PPARGC1BQ86YN6 1023 aaKnown RBP13.03□□□□□ -0.32
CDH17-202ENST00000441892 ABCC9O60706 1549 aa13.03□□□□□ -0.32
CDH17-202ENST00000441892 PPP6R1Q9UPN7 881 aa12.93□□□□□ -0.34
CDH17-202ENST00000441892 PCGF6Q9BYE7 350 aa12.93□□□□□ -0.34
CDH17-202ENST00000441892 SCAF1Q9H7N4 1312 aaKnown RBP12.9□□□□□ -0.34
CDH17-202ENST00000441892 SLC24A1O60721 1099 aa12.77□□□□□ -0.37
CDH17-202ENST00000441892 SLC4A1APQ9BWU0 796 aaKnown RBP12.74□□□□□ -0.37
CDH17-202ENST00000441892 MYO15BQ96JP2 1530 aa12.72□□□□□ -0.37
CDH17-202ENST00000441892 DCAF1Q9Y4B6 1507 aa12.66□□□□□ -0.38
CDH17-202ENST00000441892 TTBK1Q5TCY1 1321 aaPredicted RBP12.65□□□□□ -0.38
CDH17-202ENST00000441892 ZEB1P37275 1124 aaPredicted RBP12.64□□□□□ -0.39
CDH17-202ENST00000441892 DCAF8L2P0C7V8 631 aa12.63□□□□□ -0.39
CDH17-202ENST00000441892 ZCCHC6Q5VYS8 1495 aaKnown RBP12.61□□□□□ -0.39
CDH17-202ENST00000441892 ACIN1Q9UKV3 1341 aaKnown RBP12.53□□□□□ -0.4
CDH17-202ENST00000441892 TRIM26Q12899 539 aaPredicted RBP12.53□□□□□ -0.4
CDH17-202ENST00000441892 RTN4Q9NQC3 1192 aaKnown RBP12.53□□□□□ -0.4
CDH17-202ENST00000441892 SUPT5HO00267 1087 aaKnown RBP12.51□□□□□ -0.41
CDH17-202ENST00000441892 NACADO15069 1562 aa12.51□□□□□ -0.41
CDH17-202ENST00000441892 RB1CC1Q8TDY2 1594 aa12.5□□□□□ -0.41
CDH17-202ENST00000441892 ZBTB22O15209 634 aa12.49□□□□□ -0.41
CDH17-202ENST00000441892 FOXD1Q16676 465 aa12.46□□□□□ -0.41
CDH17-202ENST00000441892 NEUROD1Q13562 356 aa12.41□□□□□ -0.42
CDH17-202ENST00000441892 PPP4R3CPQ6ZMV5 832 aa12.39□□□□□ -0.43
CDH17-202ENST00000441892 GTF3C3Q9Y5Q9 886 aa12.39□□□□□ -0.43
CDH17-202ENST00000441892 SHROOM4Q9ULL8 1493 aa12.38□□□□□ -0.43
CDH17-202ENST00000441892 CENPBP07199 599 aaPredicted RBP12.35□□□□□ -0.43
CDH17-202ENST00000441892 UNC13AQ9UPW8 1703 aa12.35□□□□□ -0.43
CDH17-202ENST00000441892 SCRIBQ14160 1630 aa12.26□□□□□ -0.45
CDH17-202ENST00000441892 NPM3O75607 178 aaKnown RBP12.26□□□□□ -0.45
CDH17-202ENST00000441892 PABPN1Q86U42 306 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDH17-202ENST00000441892 BCL11AQ9H165 835 aa12.22□□□□□ -0.45
CDH17-202ENST00000441892 BICRAQ9NZM4 1560 aa12.21□□□□□ -0.45
CDH17-202ENST00000441892 LOC105371045A0A1W2PR82 267 aa12.19□□□□□ -0.46
CDH17-202ENST00000441892 AMER1Q5JTC6 1135 aaPredicted RBP12.15□□□□□ -0.46
CDH17-202ENST00000441892 DIEXFQ68CQ4 756 aaKnown RBP12.09□□□□□ -0.47
CDH17-202ENST00000441892 NCBP3Q53F19 620 aaKnown RBP12.08□□□□□ -0.48
CDH17-202ENST00000441892 FAM9AQ8IZU1 332 aaPredicted RBP12.08□□□□□ -0.48
CDH17-202ENST00000441892 ANP32EQ9BTT0 268 aa12.03□□□□□ -0.48
CDH17-202ENST00000441892 PRKCSHP14314 528 aaPredicted RBP12□□□□□ -0.49
CDH17-202ENST00000441892 DNAJC5BQ9UF47 199 aa11.94□□□□□ -0.5
CDH17-202ENST00000441892 TRIM41Q8WV44 630 aa11.92□□□□□ -0.5
CDH17-202ENST00000441892 PIAS4Q8N2W9 510 aaPredicted RBP11.91□□□□□ -0.5
CDH17-202ENST00000441892 CLSPNQ9HAW4 1339 aa11.89□□□□□ -0.51
CDH17-202ENST00000441892 ERICH6Q7L0X2 663 aa11.88□□□□□ -0.51
CDH17-202ENST00000441892 CCER1Q8TC90 406 aaPredicted RBP11.88□□□□□ -0.51
CDH17-202ENST00000441892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.84□□□□□ -0.51
CDH17-202ENST00000441892 CECR2Q9BXF3 1484 aa11.84□□□□□ -0.51
CDH17-202ENST00000441892 EIF4G1Q04637 1599 aaKnown RBP11.83□□□□□ -0.52
CDH17-202ENST00000441892 YTHDC1Q96MU7 727 aaKnown RBP11.82□□□□□ -0.52
CDH17-202ENST00000441892 FOXD4L1Q9NU39 408 aa11.82□□□□□ -0.52
CDH17-202ENST00000441892 ZNF316A6NFI3 1004 aaPredicted RBP11.8□□□□□ -0.52
CDH17-202ENST00000441892 TSHZ2Q9NRE2 1034 aa11.79□□□□□ -0.52
CDH17-202ENST00000441892 CC2D2AQ9P2K1 1620 aa11.78□□□□□ -0.52
CDH17-202ENST00000441892 SUPT16HQ9Y5B9 1047 aaKnown RBP11.74□□□□□ -0.53
CDH17-202ENST00000441892 APLP2Q06481 763 aa11.72□□□□□ -0.53
CDH17-202ENST00000441892 CNKSR2Q8WXI2 1034 aa11.71□□□□□ -0.53
CDH17-202ENST00000441892 SMARCA4P51532 1647 aa11.71□□□□□ -0.53
CDH17-202ENST00000441892 MIER1Q8N108 512 aa11.71□□□□□ -0.54
CDH17-202ENST00000441892 MROH2BQ7Z745 1585 aa11.7□□□□□ -0.54
CDH17-202ENST00000441892 FKBP8Q14318 412 aa11.68□□□□□ -0.54
CDH17-202ENST00000441892 BAZ1AQ9NRL2 1556 aaPredicted RBP11.67□□□□□ -0.54
CDH17-202ENST00000441892 ATAD2BQ9ULI0 1458 aa11.62□□□□□ -0.55
CDH17-202ENST00000441892 WIZO95785 1651 aa11.6□□□□□ -0.55
CDH17-202ENST00000441892 RSF1Q96T23 1441 aaPredicted RBP11.59□□□□□ -0.55
CDH17-202ENST00000441892 NCAPD3P42695 1498 aa11.57□□□□□ -0.56
CDH17-202ENST00000441892 PEG3Q9GZU2 1588 aa11.56□□□□□ -0.56
CDH17-202ENST00000441892 SMARCA2P51531 1590 aa11.55□□□□□ -0.56
CDH17-202ENST00000441892 MYT1LQ9UL68 1186 aa11.5□□□□□ -0.57
CDH17-202ENST00000441892 HMGXB3Q12766 1538 aa11.5□□□□□ -0.57
CDH17-202ENST00000441892 BAZ1BQ9UIG0 1483 aaKnown RBP11.5□□□□□ -0.57
CDH17-202ENST00000441892 MAPK8IP2Q13387 824 aaPredicted RBP11.48□□□□□ -0.57
CDH17-202ENST00000441892 RBM19Q9Y4C8 960 aaKnown RBP11.48□□□□□ -0.57
CDH17-202ENST00000441892 WRNQ14191 1432 aaPredicted RBP eCLIP11.45□□□□□ -0.58
CDH17-202ENST00000441892 SLC4A2P04920 1241 aa11.41□□□□□ -0.58
CDH17-202ENST00000441892 TOP2AP11388 1531 aaKnown RBP11.4□□□□□ -0.58
CDH17-202ENST00000441892 MSH5O43196 834 aa11.39□□□□□ -0.59
CDH17-202ENST00000441892 ANO8Q9HCE9 1232 aaPredicted RBP11.37□□□□□ -0.59
CDH17-202ENST00000441892 FANCIQ9NVI1 1328 aa11.36□□□□□ -0.59
CDH17-202ENST00000441892 ERICH6BQ5W0A0 696 aa11.35□□□□□ -0.59
CDH17-202ENST00000441892 NESP48681 1621 aa11.34□□□□□ -0.59
CDH17-202ENST00000441892 CCDC88BA6NC98 1476 aa11.32□□□□□ -0.6
CDH17-202ENST00000441892 DEKP35659 375 aaKnown RBP11.32□□□□□ -0.6
CDH17-202ENST00000441892 BCANQ96GW7 911 aa11.32□□□□□ -0.6
CDH17-202ENST00000441892 PLCB2Q00722 1185 aa11.31□□□□□ -0.6
CDH17-202ENST00000441892 UBE2Q2Q8WVN8 375 aa11.29□□□□□ -0.6
CDH17-202ENST00000441892 NEFLP07196 543 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms