RNA–Protein interactions for RNA: ENST00000546330.1

SLC24A1-212, Transcript of solute carrier family 24 member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLC24A1, Length 3,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC24A1-212ENST00000546330 NISCHQ9Y2I1 1504 aa15.07■□□□□ 0
SLC24A1-212ENST00000546330 CCDC180Q9P1Z9 1646 aa13.22□□□□□ -0.29
SLC24A1-212ENST00000546330 ABCC9O60706 1549 aa13.14□□□□□ -0.31
SLC24A1-212ENST00000546330 SUPT5HO00267 1087 aaKnown RBP13.13□□□□□ -0.31
SLC24A1-212ENST00000546330 SHROOM4Q9ULL8 1493 aa13.06□□□□□ -0.32
SLC24A1-212ENST00000546330 HRCP23327 699 aa13.03□□□□□ -0.32
SLC24A1-212ENST00000546330 PCGF6Q9BYE7 350 aa13.02□□□□□ -0.32
SLC24A1-212ENST00000546330 PPARGC1BQ86YN6 1023 aaKnown RBP12.96□□□□□ -0.34
SLC24A1-212ENST00000546330 DCAF8L2P0C7V8 631 aa12.79□□□□□ -0.36
SLC24A1-212ENST00000546330 PELP1Q8IZL8 1130 aaKnown RBP12.69□□□□□ -0.38
SLC24A1-212ENST00000546330 CHIC1Q5VXU3 224 aa12.57□□□□□ -0.4
SLC24A1-212ENST00000546330 ZCCHC6Q5VYS8 1495 aaKnown RBP12.56□□□□□ -0.4
SLC24A1-212ENST00000546330 LOC105371045A0A1W2PR82 267 aa12.49□□□□□ -0.41
SLC24A1-212ENST00000546330 RB1CC1Q8TDY2 1594 aa12.47□□□□□ -0.41
SLC24A1-212ENST00000546330 MYO15BQ96JP2 1530 aa12.46□□□□□ -0.42
SLC24A1-212ENST00000546330 NACADO15069 1562 aa12.45□□□□□ -0.42
SLC24A1-212ENST00000546330 SCAF1Q9H7N4 1312 aaKnown RBP12.39□□□□□ -0.43
SLC24A1-212ENST00000546330 EHMT2Q96KQ7 1210 aa12.39□□□□□ -0.43
SLC24A1-212ENST00000546330 TRIM26Q12899 539 aaPredicted RBP12.38□□□□□ -0.43
SLC24A1-212ENST00000546330 PABPN1Q86U42 306 aaKnown RBP eCLIP12.38□□□□□ -0.43
SLC24A1-212ENST00000546330 DCAF1Q9Y4B6 1507 aa12.33□□□□□ -0.44
SLC24A1-212ENST00000546330 ZEB1P37275 1124 aaPredicted RBP12.3□□□□□ -0.44
SLC24A1-212ENST00000546330 UNC13AQ9UPW8 1703 aa12.3□□□□□ -0.44
SLC24A1-212ENST00000546330 SCRIBQ14160 1630 aa12.28□□□□□ -0.44
SLC24A1-212ENST00000546330 FAM9AQ8IZU1 332 aaPredicted RBP12.24□□□□□ -0.45
SLC24A1-212ENST00000546330 BICRAQ9NZM4 1560 aa12.21□□□□□ -0.45
SLC24A1-212ENST00000546330 MYT1Q01538 1121 aa12.2□□□□□ -0.46
SLC24A1-212ENST00000546330 GTF3C3Q9Y5Q9 886 aa12.14□□□□□ -0.47
SLC24A1-212ENST00000546330 CENPBP07199 599 aaPredicted RBP12.13□□□□□ -0.47
SLC24A1-212ENST00000546330 DNAJC5BQ9UF47 199 aa12.13□□□□□ -0.47
SLC24A1-212ENST00000546330 NEUROD1Q13562 356 aa12.1□□□□□ -0.47
SLC24A1-212ENST00000546330 ACIN1Q9UKV3 1341 aaKnown RBP12.1□□□□□ -0.47
SLC24A1-212ENST00000546330 CCER1Q8TC90 406 aaPredicted RBP12.09□□□□□ -0.47
SLC24A1-212ENST00000546330 YTHDC1Q96MU7 727 aaKnown RBP12.07□□□□□ -0.48
SLC24A1-212ENST00000546330 TTBK1Q5TCY1 1321 aaPredicted RBP12.06□□□□□ -0.48
SLC24A1-212ENST00000546330 AEBP2Q6ZN18 517 aaPredicted RBP12.05□□□□□ -0.48
SLC24A1-212ENST00000546330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.04□□□□□ -0.48
SLC24A1-212ENST00000546330 TRIM41Q8WV44 630 aa12.01□□□□□ -0.49
SLC24A1-212ENST00000546330 DIEXFQ68CQ4 756 aaKnown RBP11.99□□□□□ -0.49
SLC24A1-212ENST00000546330 CECR2Q9BXF3 1484 aa11.87□□□□□ -0.51
SLC24A1-212ENST00000546330 EIF4G1Q04637 1599 aaKnown RBP11.85□□□□□ -0.51
SLC24A1-212ENST00000546330 CC2D2AQ9P2K1 1620 aa11.81□□□□□ -0.52
SLC24A1-212ENST00000546330 MROH2BQ7Z745 1585 aa11.7□□□□□ -0.54
SLC24A1-212ENST00000546330 SMARCA4P51532 1647 aa11.67□□□□□ -0.54
SLC24A1-212ENST00000546330 ZNF316A6NFI3 1004 aaPredicted RBP11.66□□□□□ -0.54
SLC24A1-212ENST00000546330 MIER1Q8N108 512 aa11.62□□□□□ -0.55
SLC24A1-212ENST00000546330 BAZ1AQ9NRL2 1556 aaPredicted RBP11.62□□□□□ -0.55
SLC24A1-212ENST00000546330 ATAD2BQ9ULI0 1458 aa11.62□□□□□ -0.55
SLC24A1-212ENST00000546330 HNRNPUL2Q1KMD3 747 aaKnown RBP11.59□□□□□ -0.55
SLC24A1-212ENST00000546330 WIZO95785 1651 aa11.58□□□□□ -0.56
SLC24A1-212ENST00000546330 RSF1Q96T23 1441 aaPredicted RBP11.57□□□□□ -0.56
SLC24A1-212ENST00000546330 NCAPD3P42695 1498 aa11.55□□□□□ -0.56
SLC24A1-212ENST00000546330 UBTFP17480 764 aaKnown RBP11.52□□□□□ -0.57
SLC24A1-212ENST00000546330 BCANQ96GW7 911 aa11.51□□□□□ -0.57
SLC24A1-212ENST00000546330 SMARCA2P51531 1590 aa11.51□□□□□ -0.57
SLC24A1-212ENST00000546330 BAZ1BQ9UIG0 1483 aaKnown RBP11.5□□□□□ -0.57
SLC24A1-212ENST00000546330 RANGAP1P46060 587 aaPredicted RBP11.49□□□□□ -0.57
SLC24A1-212ENST00000546330 BCL11AQ9H165 835 aa11.49□□□□□ -0.57
SLC24A1-212ENST00000546330 PEG3Q9GZU2 1588 aa11.49□□□□□ -0.57
SLC24A1-212ENST00000546330 HMGXB3Q12766 1538 aa11.45□□□□□ -0.58
SLC24A1-212ENST00000546330 ANP32EQ9BTT0 268 aa11.44□□□□□ -0.58
SLC24A1-212ENST00000546330 NESP48681 1621 aa11.43□□□□□ -0.58
SLC24A1-212ENST00000546330 APLP2Q06481 763 aa11.42□□□□□ -0.58
SLC24A1-212ENST00000546330 SUPT16HQ9Y5B9 1047 aaKnown RBP11.41□□□□□ -0.58
SLC24A1-212ENST00000546330 CSRNP3Q8WYN3 585 aa11.36□□□□□ -0.59
SLC24A1-212ENST00000546330 TSHZ2Q9NRE2 1034 aa11.35□□□□□ -0.59
SLC24A1-212ENST00000546330 ERICH6Q7L0X2 663 aa11.35□□□□□ -0.59
SLC24A1-212ENST00000546330 TOP2AP11388 1531 aaKnown RBP11.34□□□□□ -0.59
SLC24A1-212ENST00000546330 NEFLP07196 543 aa11.32□□□□□ -0.6
SLC24A1-212ENST00000546330 PRKCSHP14314 528 aaPredicted RBP11.32□□□□□ -0.6
SLC24A1-212ENST00000546330 CCDC88BA6NC98 1476 aa11.3□□□□□ -0.6
SLC24A1-212ENST00000546330 FKBP8Q14318 412 aa11.29□□□□□ -0.6
SLC24A1-212ENST00000546330 CADPSQ9ULU8 1353 aa11.25□□□□□ -0.61
SLC24A1-212ENST00000546330 ITGAEP38570 1179 aa11.25□□□□□ -0.61
SLC24A1-212ENST00000546330 CLSPNQ9HAW4 1339 aa11.25□□□□□ -0.61
SLC24A1-212ENST00000546330 CEP162Q5TB80 1403 aa11.24□□□□□ -0.61
SLC24A1-212ENST00000546330 ERCC6Q03468 1493 aa11.23□□□□□ -0.61
SLC24A1-212ENST00000546330 CFTRP13569 1480 aa11.19□□□□□ -0.62
SLC24A1-212ENST00000546330 KIF21AQ7Z4S6 1674 aa11.19□□□□□ -0.62
SLC24A1-212ENST00000546330 LAMC3Q9Y6N6 1575 aa11.19□□□□□ -0.62
SLC24A1-212ENST00000546330 KCNH8Q96L42 1107 aa11.17□□□□□ -0.62
SLC24A1-212ENST00000546330 TRIM52Q96A61 297 aa11.15□□□□□ -0.62
SLC24A1-212ENST00000546330 RBM19Q9Y4C8 960 aaKnown RBP11.15□□□□□ -0.62
SLC24A1-212ENST00000546330 FANCD2Q9BXW9 1451 aa11.14□□□□□ -0.63
SLC24A1-212ENST00000546330 PDS5BQ9NTI5 1447 aa11.14□□□□□ -0.63
SLC24A1-212ENST00000546330 DDX10Q13206 875 aaKnown RBP11.12□□□□□ -0.63
SLC24A1-212ENST00000546330 THOC2Q8NI27 1593 aaKnown RBP11.09□□□□□ -0.63
SLC24A1-212ENST00000546330 SOGA1O94964 1423 aa11.08□□□□□ -0.64
SLC24A1-212ENST00000546330 IRX6P78412 446 aaPredicted RBP11.08□□□□□ -0.64
SLC24A1-212ENST00000546330 CEP164Q9UPV0 1460 aa11.08□□□□□ -0.64
SLC24A1-212ENST00000546330 TNIKQ9UKE5 1360 aa11.07□□□□□ -0.64
SLC24A1-212ENST00000546330 HIRIP3Q9BW71 556 aaPredicted RBP11.07□□□□□ -0.64
SLC24A1-212ENST00000546330 WRNQ14191 1432 aaPredicted RBP eCLIP11.06□□□□□ -0.64
SLC24A1-212ENST00000546330 URB2Q14146 1524 aaKnown RBP11.06□□□□□ -0.64
SLC24A1-212ENST00000546330 CDK11AQ9UQ88 783 aaPredicted RBP11.05□□□□□ -0.64
SLC24A1-212ENST00000546330 MRC2Q9UBG0 1479 aa11.03□□□□□ -0.64
SLC24A1-212ENST00000546330 ABCC8Q09428 1581 aa11.02□□□□□ -0.64
SLC24A1-212ENST00000546330 NBR1Q14596 966 aa11.01□□□□□ -0.65
SLC24A1-212ENST00000546330 ANP32CO43423 234 aa11□□□□□ -0.65
SLC24A1-212ENST00000546330 PRDM2Q13029 1718 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms