RNA–Protein interactions for RNA: ENST00000468789.5

MECOM-208, Transcript of MDS1 and EVI1 complex locus, human

APPRIS P3 TSL 2 BASIC

Gene MECOM, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECOM-208	ENST00000468789	NISCH	Q9Y2I1	1504 aa		14.42	□□□□□ -0.1
MECOM-208	ENST00000468789	HRC	P23327	699 aa		13.92	□□□□□ -0.18
MECOM-208	ENST00000468789	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.88	□□□□□ -0.19
MECOM-208	ENST00000468789	PCGF6	Q9BYE7	350 aa		13.8	□□□□□ -0.2
MECOM-208	ENST00000468789	SUPT5H	O00267	1087 aa	Known RBP	13.69	□□□□□ -0.22
MECOM-208	ENST00000468789	PELP1	Q8IZL8	1130 aa	Known RBP	13.66	□□□□□ -0.22
MECOM-208	ENST00000468789	SHROOM4	Q9ULL8	1493 aa		13.6	□□□□□ -0.23
MECOM-208	ENST00000468789	SCAF1	Q9H7N4	1312 aa	Known RBP	13.36	□□□□□ -0.27
MECOM-208	ENST00000468789	MYO15B	Q96JP2	1530 aa		13.23	□□□□□ -0.29
MECOM-208	ENST00000468789	CHIC1	Q5VXU3	224 aa		13.22	□□□□□ -0.29
MECOM-208	ENST00000468789	LOC105371045	A0A1W2PR82	267 aa		13.16	□□□□□ -0.3
MECOM-208	ENST00000468789	MYT1	Q01538	1121 aa		13.15	□□□□□ -0.31
MECOM-208	ENST00000468789	TRIM26	Q12899	539 aa	Predicted RBP	13.07	□□□□□ -0.32
MECOM-208	ENST00000468789	GTF3C3	Q9Y5Q9	886 aa		12.99	□□□□□ -0.33
MECOM-208	ENST00000468789	ZEB1	P37275	1124 aa	Predicted RBP	12.97	□□□□□ -0.33
MECOM-208	ENST00000468789	NEUROD1	Q13562	356 aa		12.97	□□□□□ -0.33
MECOM-208	ENST00000468789	ACIN1	Q9UKV3	1341 aa	Known RBP	12.94	□□□□□ -0.34
MECOM-208	ENST00000468789	EHMT2	Q96KQ7	1210 aa		12.93	□□□□□ -0.34
MECOM-208	ENST00000468789	DCAF8L2	P0C7V8	631 aa		12.87	□□□□□ -0.35
MECOM-208	ENST00000468789	CENPB	P07199	599 aa	Predicted RBP	12.84	□□□□□ -0.35
MECOM-208	ENST00000468789	DCAF1	Q9Y4B6	1507 aa		12.83	□□□□□ -0.36
MECOM-208	ENST00000468789	YTHDC1	Q96MU7	727 aa	Known RBP	12.8	□□□□□ -0.36
MECOM-208	ENST00000468789	FAM9A	Q8IZU1	332 aa	Predicted RBP	12.76	□□□□□ -0.37
MECOM-208	ENST00000468789	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.72	□□□□□ -0.37
MECOM-208	ENST00000468789	DIEXF	Q68CQ4	756 aa	Known RBP	12.71	□□□□□ -0.38
MECOM-208	ENST00000468789	CCER1	Q8TC90	406 aa	Predicted RBP	12.7	□□□□□ -0.38
MECOM-208	ENST00000468789	CCDC180	Q9P1Z9	1646 aa		12.65	□□□□□ -0.38
MECOM-208	ENST00000468789	TTBK1	Q5TCY1	1321 aa	Predicted RBP	12.62	□□□□□ -0.39
MECOM-208	ENST00000468789	TRIM41	Q8WV44	630 aa		12.49	□□□□□ -0.41
MECOM-208	ENST00000468789	BCL11A	Q9H165	835 aa		12.49	□□□□□ -0.41
MECOM-208	ENST00000468789	MIER1	Q8N108	512 aa		12.35	□□□□□ -0.43
MECOM-208	ENST00000468789	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.33	□□□□□ -0.44
MECOM-208	ENST00000468789	ANP32E	Q9BTT0	268 aa		12.31	□□□□□ -0.44
MECOM-208	ENST00000468789	CSRNP3	Q8WYN3	585 aa		12.27	□□□□□ -0.45
MECOM-208	ENST00000468789	ZCCHC6	Q5VYS8	1495 aa	Known RBP	12.23	□□□□□ -0.45
MECOM-208	ENST00000468789	BCAN	Q96GW7	911 aa		12.22	□□□□□ -0.45
MECOM-208	ENST00000468789	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.19	□□□□□ -0.46
MECOM-208	ENST00000468789	SLC24A1	O60721	1099 aa		12.19	□□□□□ -0.46
MECOM-208	ENST00000468789	TSHZ2	Q9NRE2	1034 aa		12.18	□□□□□ -0.46
MECOM-208	ENST00000468789	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.13	□□□□□ -0.47
MECOM-208	ENST00000468789	PRKCSH	P14314	528 aa	Predicted RBP	12.07	□□□□□ -0.48
MECOM-208	ENST00000468789	ERICH6	Q7L0X2	663 aa		11.99	□□□□□ -0.49
MECOM-208	ENST00000468789	FKBP8	Q14318	412 aa		11.98	□□□□□ -0.49
MECOM-208	ENST00000468789	ITGAE	P38570	1179 aa		11.97	□□□□□ -0.49
MECOM-208	ENST00000468789	UBTF	P17480	764 aa	Known RBP	11.93	□□□□□ -0.5
MECOM-208	ENST00000468789	RBM19	Q9Y4C8	960 aa	Known RBP	11.93	□□□□□ -0.5
MECOM-208	ENST00000468789	RANGAP1	P46060	587 aa	Predicted RBP	11.91	□□□□□ -0.5
MECOM-208	ENST00000468789	CLSPN	Q9HAW4	1339 aa		11.91	□□□□□ -0.5
MECOM-208	ENST00000468789	NEFL	P07196	543 aa		11.89	□□□□□ -0.51
MECOM-208	ENST00000468789	KCNH8	Q96L42	1107 aa		11.89	□□□□□ -0.51
MECOM-208	ENST00000468789	RSF1	Q96T23	1441 aa	Predicted RBP	11.81	□□□□□ -0.52
MECOM-208	ENST00000468789	APLP2	Q06481	763 aa		11.79	□□□□□ -0.52
MECOM-208	ENST00000468789	MSH5	O43196	834 aa		11.79	□□□□□ -0.52
MECOM-208	ENST00000468789	TRIM52	Q96A61	297 aa		11.79	□□□□□ -0.52
MECOM-208	ENST00000468789	RB1CC1	Q8TDY2	1594 aa		11.78	□□□□□ -0.52
MECOM-208	ENST00000468789	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.78	□□□□□ -0.52
MECOM-208	ENST00000468789	CEP162	Q5TB80	1403 aa		11.75	□□□□□ -0.53
MECOM-208	ENST00000468789	IRX6	P78412	446 aa	Predicted RBP	11.75	□□□□□ -0.53
MECOM-208	ENST00000468789	NBR1	Q14596	966 aa		11.74	□□□□□ -0.53
MECOM-208	ENST00000468789	DEK	P35659	375 aa	Known RBP	11.74	□□□□□ -0.53
MECOM-208	ENST00000468789	CCDC136	Q96JN2	1154 aa		11.71	□□□□□ -0.53
MECOM-208	ENST00000468789	DDX10	Q13206	875 aa	Known RBP	11.7	□□□□□ -0.54
MECOM-208	ENST00000468789	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.68	□□□□□ -0.54
MECOM-208	ENST00000468789	RTN4	Q9NQC3	1192 aa	Known RBP	11.67	□□□□□ -0.54
MECOM-208	ENST00000468789	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.66	□□□□□ -0.54
MECOM-208	ENST00000468789	SALL2	Q9Y467	1007 aa	Predicted RBP	11.63	□□□□□ -0.55
MECOM-208	ENST00000468789	ABCC9	O60706	1549 aa		11.63	□□□□□ -0.55
MECOM-208	ENST00000468789	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.62	□□□□□ -0.55
MECOM-208	ENST00000468789	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.62	□□□□□ -0.55
MECOM-208	ENST00000468789	SOGA1	O94964	1423 aa		11.57	□□□□□ -0.56
MECOM-208	ENST00000468789	SCRIB	Q14160	1630 aa		11.56	□□□□□ -0.56
MECOM-208	ENST00000468789	TNIK	Q9UKE5	1360 aa		11.56	□□□□□ -0.56
MECOM-208	ENST00000468789	RTL5	Q5HYW3	569 aa	Predicted RBP	11.54	□□□□□ -0.56
MECOM-208	ENST00000468789	FANCI	Q9NVI1	1328 aa		11.53	□□□□□ -0.56
MECOM-208	ENST00000468789	CCDC88B	A6NC98	1476 aa		11.53	□□□□□ -0.56
MECOM-208	ENST00000468789	ANP32C	O43423	234 aa		11.53	□□□□□ -0.56
MECOM-208	ENST00000468789	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.52	□□□□□ -0.57
MECOM-208	ENST00000468789	MYT1L	Q9UL68	1186 aa		11.51	□□□□□ -0.57
MECOM-208	ENST00000468789	EIF5B	O60841	1220 aa	Known RBP	11.51	□□□□□ -0.57
MECOM-208	ENST00000468789	DHX57	Q6P158	1386 aa	Known RBP	11.51	□□□□□ -0.57
MECOM-208	ENST00000468789	IL27	Q8NEV9	243 aa		11.5	□□□□□ -0.57
MECOM-208	ENST00000468789	ABCC8	Q09428	1581 aa		11.5	□□□□□ -0.57
MECOM-208	ENST00000468789	B4GALNT3	Q6L9W6	998 aa		11.48	□□□□□ -0.57
MECOM-208	ENST00000468789	CECR2	Q9BXF3	1484 aa		11.48	□□□□□ -0.57
MECOM-208	ENST00000468789	RUSC2	Q8N2Y8	1516 aa		11.47	□□□□□ -0.57
MECOM-208	ENST00000468789	NOP58	Q9Y2X3	529 aa	Known RBP	11.47	□□□□□ -0.57
MECOM-208	ENST00000468789	PAK3	O75914	559 aa	Predicted RBP	11.47	□□□□□ -0.57
MECOM-208	ENST00000468789	NACAD	O15069	1562 aa		11.45	□□□□□ -0.58
MECOM-208	ENST00000468789	SIN3A	Q96ST3	1273 aa		11.44	□□□□□ -0.58
MECOM-208	ENST00000468789	CLIP1	P30622	1438 aa		11.43	□□□□□ -0.58
MECOM-208	ENST00000468789	CNGB1	Q14028	1251 aa	Predicted RBP	11.41	□□□□□ -0.58
MECOM-208	ENST00000468789	NPM2	Q86SE8	214 aa	Known RBP	11.4	□□□□□ -0.58
MECOM-208	ENST00000468789	MROH2B	Q7Z745	1585 aa		11.39	□□□□□ -0.59
MECOM-208	ENST00000468789	GOLGA3	Q08378	1498 aa		11.38	□□□□□ -0.59
MECOM-208	ENST00000468789	ANP32A	P39687	249 aa	Known RBP	11.38	□□□□□ -0.59
MECOM-208	ENST00000468789	KANK4	Q5T7N3	995 aa	Predicted RBP	11.38	□□□□□ -0.59
MECOM-208	ENST00000468789	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.38	□□□□□ -0.59
MECOM-208	ENST00000468789	SENP3-EIF4A1	A0A087X0R7	540 aa		11.36	□□□□□ -0.59
MECOM-208	ENST00000468789	PPP4R2	Q9NY27	417 aa		11.36	□□□□□ -0.59
MECOM-208	ENST00000468789	LAS1L	Q9Y4W2	734 aa	Known RBP	11.36	□□□□□ -0.59

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