RNA–Protein interactions for RNA: ENST00000551457.1

TMCC3-203, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

TSL 1 (best) BASIC

Gene TMCC3, Length 4,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-203ENST00000551457 NISCHQ9Y2I1 1504 aa14.73□□□□□ -0.05
TMCC3-203ENST00000551457 DCAF8L2P0C7V8 631 aa13.97□□□□□ -0.17
TMCC3-203ENST00000551457 SUPT5HO00267 1087 aaKnown RBP13.74□□□□□ -0.21
TMCC3-203ENST00000551457 SHROOM4Q9ULL8 1493 aa13.56□□□□□ -0.24
TMCC3-203ENST00000551457 PCGF6Q9BYE7 350 aa13.03□□□□□ -0.32
TMCC3-203ENST00000551457 ZEB1P37275 1124 aaPredicted RBP12.91□□□□□ -0.34
TMCC3-203ENST00000551457 EHMT2Q96KQ7 1210 aa12.87□□□□□ -0.35
TMCC3-203ENST00000551457 FAM9AQ8IZU1 332 aaPredicted RBP12.83□□□□□ -0.36
TMCC3-203ENST00000551457 TRIM41Q8WV44 630 aa12.82□□□□□ -0.36
TMCC3-203ENST00000551457 APLP2Q06481 763 aa12.75□□□□□ -0.37
TMCC3-203ENST00000551457 HRCP23327 699 aa12.74□□□□□ -0.37
TMCC3-203ENST00000551457 CHIC1Q5VXU3 224 aa12.74□□□□□ -0.37
TMCC3-203ENST00000551457 PELP1Q8IZL8 1130 aaKnown RBP12.72□□□□□ -0.37
TMCC3-203ENST00000551457 TRIM26Q12899 539 aaPredicted RBP12.67□□□□□ -0.38
TMCC3-203ENST00000551457 CENPBP07199 599 aaPredicted RBP12.62□□□□□ -0.39
TMCC3-203ENST00000551457 CCER1Q8TC90 406 aaPredicted RBP12.6□□□□□ -0.39
TMCC3-203ENST00000551457 LOC105371045A0A1W2PR82 267 aa12.5□□□□□ -0.41
TMCC3-203ENST00000551457 TTBK1Q5TCY1 1321 aaPredicted RBP12.5□□□□□ -0.41
TMCC3-203ENST00000551457 UBTFP17480 764 aaKnown RBP12.47□□□□□ -0.41
TMCC3-203ENST00000551457 MYT1Q01538 1121 aa12.32□□□□□ -0.44
TMCC3-203ENST00000551457 PPARGC1BQ86YN6 1023 aaKnown RBP12.31□□□□□ -0.44
TMCC3-203ENST00000551457 ZCCHC6Q5VYS8 1495 aaKnown RBP12.31□□□□□ -0.44
TMCC3-203ENST00000551457 RANGAP1P46060 587 aaPredicted RBP12.29□□□□□ -0.44
TMCC3-203ENST00000551457 YTHDC1Q96MU7 727 aaKnown RBP12.17□□□□□ -0.46
TMCC3-203ENST00000551457 DCAF1Q9Y4B6 1507 aa12.16□□□□□ -0.46
TMCC3-203ENST00000551457 CCDC180Q9P1Z9 1646 aa12.15□□□□□ -0.46
TMCC3-203ENST00000551457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.12□□□□□ -0.47
TMCC3-203ENST00000551457 NEFLP07196 543 aa12.12□□□□□ -0.47
TMCC3-203ENST00000551457 ATP1B4Q9UN42 357 aaPredicted RBP12.12□□□□□ -0.47
TMCC3-203ENST00000551457 DIEXFQ68CQ4 756 aaKnown RBP12.1□□□□□ -0.47
TMCC3-203ENST00000551457 HNRNPUL2Q1KMD3 747 aaKnown RBP12.08□□□□□ -0.48
TMCC3-203ENST00000551457 ERICH6Q7L0X2 663 aa12.04□□□□□ -0.48
TMCC3-203ENST00000551457 ABCC9O60706 1549 aa12.03□□□□□ -0.48
TMCC3-203ENST00000551457 ITGAEP38570 1179 aa11.94□□□□□ -0.5
TMCC3-203ENST00000551457 CSRNP3Q8WYN3 585 aa11.93□□□□□ -0.5
TMCC3-203ENST00000551457 ZNF316A6NFI3 1004 aaPredicted RBP11.91□□□□□ -0.5
TMCC3-203ENST00000551457 MYO15BQ96JP2 1530 aa11.91□□□□□ -0.5
TMCC3-203ENST00000551457 SCRIBQ14160 1630 aa11.87□□□□□ -0.51
TMCC3-203ENST00000551457 ACIN1Q9UKV3 1341 aaKnown RBP11.87□□□□□ -0.51
TMCC3-203ENST00000551457 GTF3C3Q9Y5Q9 886 aa11.87□□□□□ -0.51
TMCC3-203ENST00000551457 PABPN1Q86U42 306 aaKnown RBP eCLIP11.84□□□□□ -0.51
TMCC3-203ENST00000551457 RSF1Q96T23 1441 aaPredicted RBP11.81□□□□□ -0.52
TMCC3-203ENST00000551457 FAM50AQ14320 339 aaKnown RBP11.74□□□□□ -0.53
TMCC3-203ENST00000551457 CLSPNQ9HAW4 1339 aa11.72□□□□□ -0.53
TMCC3-203ENST00000551457 EEA1Q15075 1411 aa11.7□□□□□ -0.54
TMCC3-203ENST00000551457 ANP32CO43423 234 aa11.66□□□□□ -0.54
TMCC3-203ENST00000551457 NEUROD1Q13562 356 aa11.66□□□□□ -0.54
TMCC3-203ENST00000551457 NACADO15069 1562 aa11.64□□□□□ -0.55
TMCC3-203ENST00000551457 RB1CC1Q8TDY2 1594 aa11.64□□□□□ -0.55
TMCC3-203ENST00000551457 POLR3GLQ9BT43 218 aa11.61□□□□□ -0.55
TMCC3-203ENST00000551457 SCAF1Q9H7N4 1312 aaKnown RBP11.6□□□□□ -0.55
TMCC3-203ENST00000551457 TRIM52Q96A61 297 aa11.59□□□□□ -0.55
TMCC3-203ENST00000551457 CEP162Q5TB80 1403 aa11.59□□□□□ -0.55
TMCC3-203ENST00000551457 TNIKQ9UKE5 1360 aa11.58□□□□□ -0.56
TMCC3-203ENST00000551457 CLIP1P30622 1438 aa11.57□□□□□ -0.56
TMCC3-203ENST00000551457 GOLGA3Q08378 1498 aa11.57□□□□□ -0.56
TMCC3-203ENST00000551457 DAXXQ9UER7 740 aaPredicted RBP11.54□□□□□ -0.56
TMCC3-203ENST00000551457 BCANQ96GW7 911 aa11.53□□□□□ -0.56
TMCC3-203ENST00000551457 CDK11AQ9UQ88 783 aaPredicted RBP11.52□□□□□ -0.57
TMCC3-203ENST00000551457 BAZ1AQ9NRL2 1556 aaPredicted RBP11.51□□□□□ -0.57
TMCC3-203ENST00000551457 WRNQ14191 1432 aaPredicted RBP eCLIP11.5□□□□□ -0.57
TMCC3-203ENST00000551457 MIER1Q8N108 512 aa11.49□□□□□ -0.57
TMCC3-203ENST00000551457 P3H3Q8IVL6 736 aa11.48□□□□□ -0.57
TMCC3-203ENST00000551457 CEP164Q9UPV0 1460 aa11.47□□□□□ -0.57
TMCC3-203ENST00000551457 CNGB1Q14028 1251 aaPredicted RBP11.47□□□□□ -0.57
TMCC3-203ENST00000551457 CECR2Q9BXF3 1484 aa11.47□□□□□ -0.57
TMCC3-203ENST00000551457 RTL5Q5HYW3 569 aaPredicted RBP11.46□□□□□ -0.57
TMCC3-203ENST00000551457 TONSLQ96HA7 1378 aa11.46□□□□□ -0.58
TMCC3-203ENST00000551457 DDX10Q13206 875 aaKnown RBP11.42□□□□□ -0.58
TMCC3-203ENST00000551457 FKBP8Q14318 412 aa11.4□□□□□ -0.58
TMCC3-203ENST00000551457 MYT1LQ9UL68 1186 aa11.4□□□□□ -0.58
TMCC3-203ENST00000551457 MROH2BQ7Z745 1585 aa11.38□□□□□ -0.59
TMCC3-203ENST00000551457 ZNF326Q5BKZ1 582 aaKnown RBP11.36□□□□□ -0.59
TMCC3-203ENST00000551457 BAZ1BQ9UIG0 1483 aaKnown RBP11.35□□□□□ -0.59
TMCC3-203ENST00000551457 KIF27Q86VH2 1401 aa11.35□□□□□ -0.59
TMCC3-203ENST00000551457 SOGA1O94964 1423 aa11.33□□□□□ -0.59
TMCC3-203ENST00000551457 HNRNPUQ00839 825 aaKnown RBP eCLIP11.33□□□□□ -0.6
TMCC3-203ENST00000551457 MTUS2Q5JR59 1369 aa11.31□□□□□ -0.6
TMCC3-203ENST00000551457 VPS8Q8N3P4 1428 aa11.3□□□□□ -0.6
TMCC3-203ENST00000551457 CCDC88BA6NC98 1476 aa11.3□□□□□ -0.6
TMCC3-203ENST00000551457 ANP32AP39687 249 aaKnown RBP11.28□□□□□ -0.6
TMCC3-203ENST00000551457 TIMELESSQ9UNS1 1208 aa11.26□□□□□ -0.61
TMCC3-203ENST00000551457 CCNB3Q8WWL7 1395 aa11.25□□□□□ -0.61
TMCC3-203ENST00000551457 TOP2AP11388 1531 aaKnown RBP11.24□□□□□ -0.61
TMCC3-203ENST00000551457 ARID3CA6NKF2 412 aa11.24□□□□□ -0.61
TMCC3-203ENST00000551457 FBLN2P98095 1184 aa11.23□□□□□ -0.61
TMCC3-203ENST00000551457 EIF4G2P78344 907 aaKnown RBP eCLIP11.23□□□□□ -0.61
TMCC3-203ENST00000551457 ABCC8Q09428 1581 aa11.23□□□□□ -0.61
TMCC3-203ENST00000551457 SLC4A1APQ9BWU0 796 aaKnown RBP11.23□□□□□ -0.61
TMCC3-203ENST00000551457 ZNF777Q9ULD5 760 aaPredicted RBP11.23□□□□□ -0.61
TMCC3-203ENST00000551457 FAM9BQ8IZU0 186 aa11.22□□□□□ -0.61
TMCC3-203ENST00000551457 CHIC2Q9UKJ5 165 aa11.21□□□□□ -0.61
TMCC3-203ENST00000551457 FHAD1B1AJZ9 1412 aa11.2□□□□□ -0.62
TMCC3-203ENST00000551457 WIZO95785 1651 aa11.2□□□□□ -0.62
TMCC3-203ENST00000551457 MRS2Q9HD23 443 aa11.2□□□□□ -0.62
TMCC3-203ENST00000551457 TMC1Q8TDI8 760 aa11.17□□□□□ -0.62
TMCC3-203ENST00000551457 HIRIP3Q9BW71 556 aaPredicted RBP11.16□□□□□ -0.62
TMCC3-203ENST00000551457 CCDC136Q96JN2 1154 aa11.16□□□□□ -0.62
TMCC3-203ENST00000551457 SUPT16HQ9Y5B9 1047 aaKnown RBP11.15□□□□□ -0.62
TMCC3-203ENST00000551457 SMARCA2P51531 1590 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms