Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
USH2AO75445 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
USH2AO75445 AL049693.1-201ENST00000402760 611 ntBASIC2.6□□□□□ -1.99
USH2AO75445 AL591848.1-201ENST00000413092 322 ntBASIC2.6□□□□□ -1.99
USH2AO75445 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.6□□□□□ -1.99
USH2AO75445 KRTAP3-4P-201ENST00000430780 280 ntBASIC2.6□□□□□ -1.99
USH2AO75445 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 AC245047.1-201ENST00000433276 873 ntBASIC2.6□□□□□ -1.99
USH2AO75445 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC2.6□□□□□ -1.99
USH2AO75445 AC009127.1-201ENST00000467090 155 ntBASIC2.6□□□□□ -1.99
USH2AO75445 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC2.6□□□□□ -1.99
USH2AO75445 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC2.6□□□□□ -1.99
USH2AO75445 MIR4675-201ENST00000577898 77 ntBASIC2.6□□□□□ -1.99
USH2AO75445 AC011447.4-201ENST00000587562 111 ntBASIC2.6□□□□□ -1.99
USH2AO75445 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 ZNF557-202ENST00000414706 5736 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
USH2AO75445 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 SLC25A3-203ENST00000401722 6087 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 AC062022.1-201ENST00000451026 1684 ntBASIC2.6□□□□□ -1.99
USH2AO75445 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 TNXB-201ENST00000375244 13132 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 AP003170.5-201ENST00000397185 335 ntBASIC2.6□□□□□ -1.99
USH2AO75445 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC2.6□□□□□ -1.99
USH2AO75445 AC090589.1-201ENST00000473109 362 ntBASIC2.6□□□□□ -1.99
USH2AO75445 SNORA67.7-201ENST00000516664 135 ntBASIC2.6□□□□□ -1.99
USH2AO75445 MAL2-208ENST00000523307 556 ntTSL 4 BASIC2.6□□□□□ -1.99
USH2AO75445 IGLV3-6-201ENST00000523937 250 ntBASIC2.6□□□□□ -1.99
USH2AO75445 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC2.6□□□□□ -1.99
USH2AO75445 AL109766.1-201ENST00000555080 552 ntBASIC2.6□□□□□ -1.99
USH2AO75445 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 AC010333.3-201ENST00000615100 402 ntBASIC2.6□□□□□ -1.99
USH2AO75445 SCN5A-206ENST00000425664 8450 ntTSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 GIT2-203ENST00000355312 5466 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 UNC45B-202ENST00000394570 5638 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 GTF2IP4-201ENST00000453092 2054 ntBASIC2.6□□□□□ -1.99
USH2AO75445 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
USH2AO75445 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC2.6□□□□□ -1.99
USH2AO75445 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 ESPL1-201ENST00000257934 6623 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
USH2AO75445 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
USH2AO75445 DEPDC5-202ENST00000382112 5363 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 BEND3-201ENST00000369042 6200 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 RN7SKP23-201ENST00000625159 4301 ntBASIC2.6□□□□□ -1.99
USH2AO75445 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 AL133173.1-201ENST00000423458 397 ntBASIC2.6□□□□□ -1.99
USH2AO75445 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC2.6□□□□□ -1.99
USH2AO75445 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 SNORA84-201ENST00000459229 133 ntBASIC2.6□□□□□ -1.99
USH2AO75445 AC073610.1-201ENST00000489971 396 ntBASIC2.6□□□□□ -1.99
USH2AO75445 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC2.6□□□□□ -1.99
USH2AO75445 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC2.6□□□□□ -1.99
USH2AO75445 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
USH2AO75445 AC009117.1-201ENST00000563948 554 ntBASIC2.6□□□□□ -1.99
USH2AO75445 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 AC025162.2-201ENST00000619602 560 ntBASIC2.6□□□□□ -1.99
USH2AO75445 AC132068.1-201ENST00000623805 459 ntBASIC2.6□□□□□ -1.99
USH2AO75445 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 ALDH2-201ENST00000261733 9569 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USH2AO75445 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
USH2AO75445 LRRC37A16P-202ENST00000586022 3725 ntBASIC2.6□□□□□ -1.99
USH2AO75445 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms