RNA–Protein interactions for RNA: ENST00000390447.3

TRAV19-201, Transcript of T cell receptor alpha variable 19, humanhuman

APPRIS P1 BASIC

Gene TRAV19, Length 467 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19-201ENST00000390447 AEBP2Q6ZN18 517 aaPredicted RBP15.75■□□□□ 0.11
TRAV19-201ENST00000390447 NISCHQ9Y2I1 1504 aa14.97□□□□□ -0.01
TRAV19-201ENST00000390447 CHIC1Q5VXU3 224 aa14.95□□□□□ -0.02
TRAV19-201ENST00000390447 POTEDQ86YR6 584 aa13.85□□□□□ -0.19
TRAV19-201ENST00000390447 SENP3Q9H4L4 574 aaPredicted RBP13.82□□□□□ -0.2
TRAV19-201ENST00000390447 PHF23Q9BUL5 403 aaPredicted RBP13.39□□□□□ -0.27
TRAV19-201ENST00000390447 CCDC180Q9P1Z9 1646 aa13.1□□□□□ -0.31
TRAV19-201ENST00000390447 FOXD1Q16676 465 aa12.85□□□□□ -0.35
TRAV19-201ENST00000390447 ZCCHC6Q5VYS8 1495 aaKnown RBP12.62□□□□□ -0.39
TRAV19-201ENST00000390447 MSH5O43196 834 aa12.6□□□□□ -0.39
TRAV19-201ENST00000390447 DCAF1Q9Y4B6 1507 aa12.42□□□□□ -0.42
TRAV19-201ENST00000390447 SHROOM4Q9ULL8 1493 aa12.27□□□□□ -0.45
TRAV19-201ENST00000390447 DCAF8L2P0C7V8 631 aa12.25□□□□□ -0.45
TRAV19-201ENST00000390447 MYO15BQ96JP2 1530 aa12.22□□□□□ -0.45
TRAV19-201ENST00000390447 ABCC9O60706 1549 aa12.12□□□□□ -0.47
TRAV19-201ENST00000390447 NACADO15069 1562 aa12.1□□□□□ -0.47
TRAV19-201ENST00000390447 SCRIBQ14160 1630 aa12□□□□□ -0.49
TRAV19-201ENST00000390447 RB1CC1Q8TDY2 1594 aa11.97□□□□□ -0.49
TRAV19-201ENST00000390447 SUPT5HO00267 1087 aaKnown RBP11.86□□□□□ -0.51
TRAV19-201ENST00000390447 PIAS4Q8N2W9 510 aaPredicted RBP11.85□□□□□ -0.51
TRAV19-201ENST00000390447 UNC13AQ9UPW8 1703 aa11.79□□□□□ -0.52
TRAV19-201ENST00000390447 RSF1Q96T23 1441 aaPredicted RBP11.64□□□□□ -0.55
TRAV19-201ENST00000390447 BAZ1AQ9NRL2 1556 aaPredicted RBP11.58□□□□□ -0.55
TRAV19-201ENST00000390447 CECR2Q9BXF3 1484 aa11.58□□□□□ -0.56
TRAV19-201ENST00000390447 BICRAQ9NZM4 1560 aa11.57□□□□□ -0.56
TRAV19-201ENST00000390447 MROH2BQ7Z745 1585 aa11.56□□□□□ -0.56
TRAV19-201ENST00000390447 SMARCA4P51532 1647 aa11.52□□□□□ -0.57
TRAV19-201ENST00000390447 WIZO95785 1651 aa11.52□□□□□ -0.57
TRAV19-201ENST00000390447 PABPN1Q86U42 306 aaKnown RBP eCLIP11.41□□□□□ -0.58
TRAV19-201ENST00000390447 TOP2AP11388 1531 aaKnown RBP11.4□□□□□ -0.58
TRAV19-201ENST00000390447 CACNB1Q02641 598 aaPredicted RBP11.37□□□□□ -0.59
TRAV19-201ENST00000390447 PEG3Q9GZU2 1588 aa11.37□□□□□ -0.59
TRAV19-201ENST00000390447 SMARCA2P51531 1590 aa11.29□□□□□ -0.6
TRAV19-201ENST00000390447 EIF4G1Q04637 1599 aaKnown RBP11.28□□□□□ -0.6
TRAV19-201ENST00000390447 CCDC88BA6NC98 1476 aa11.24□□□□□ -0.61
TRAV19-201ENST00000390447 ATAD2BQ9ULI0 1458 aa11.24□□□□□ -0.61
TRAV19-201ENST00000390447 BAZ1BQ9UIG0 1483 aaKnown RBP11.22□□□□□ -0.61
TRAV19-201ENST00000390447 TRIM41Q8WV44 630 aa11.17□□□□□ -0.62
TRAV19-201ENST00000390447 PPP6R1Q9UPN7 881 aa11.17□□□□□ -0.62
TRAV19-201ENST00000390447 HMGXB3Q12766 1538 aa11.17□□□□□ -0.62
TRAV19-201ENST00000390447 NCAPD3P42695 1498 aa11.12□□□□□ -0.63
TRAV19-201ENST00000390447 ADRA2BP18089 450 aa11.11□□□□□ -0.63
TRAV19-201ENST00000390447 ABCC8Q09428 1581 aa11.07□□□□□ -0.64
TRAV19-201ENST00000390447 PRDM2Q13029 1718 aa11.04□□□□□ -0.64
TRAV19-201ENST00000390447 CC2D2AQ9P2K1 1620 aa11.02□□□□□ -0.64
TRAV19-201ENST00000390447 WRNQ14191 1432 aaPredicted RBP eCLIP10.99□□□□□ -0.65
TRAV19-201ENST00000390447 LOC105371045A0A1W2PR82 267 aa10.97□□□□□ -0.65
TRAV19-201ENST00000390447 SYNJ1O43426 1573 aa10.94□□□□□ -0.66
TRAV19-201ENST00000390447 EEA1Q15075 1411 aa10.94□□□□□ -0.66
TRAV19-201ENST00000390447 FAM9AQ8IZU1 332 aaPredicted RBP10.94□□□□□ -0.66
TRAV19-201ENST00000390447 BIVM-ERCC5R4GMW8 1640 aa10.93□□□□□ -0.66
TRAV19-201ENST00000390447 CFTRP13569 1480 aa10.92□□□□□ -0.66
TRAV19-201ENST00000390447 TOP2BQ02880 1626 aa10.91□□□□□ -0.66
TRAV19-201ENST00000390447 PLPPR3Q6T4P5 718 aa10.91□□□□□ -0.66
TRAV19-201ENST00000390447 SOGA1O94964 1423 aa10.85□□□□□ -0.67
TRAV19-201ENST00000390447 CADPSQ9ULU8 1353 aa10.84□□□□□ -0.67
TRAV19-201ENST00000390447 KIF21BO75037 1637 aa10.81□□□□□ -0.68
TRAV19-201ENST00000390447 CUX1P39880 1505 aa10.81□□□□□ -0.68
TRAV19-201ENST00000390447 RUSC2Q8N2Y8 1516 aa10.79□□□□□ -0.68
TRAV19-201ENST00000390447 CSRNP3Q8WYN3 585 aa10.79□□□□□ -0.68
TRAV19-201ENST00000390447 GOLGA3Q08378 1498 aa10.79□□□□□ -0.68
TRAV19-201ENST00000390447 LAMC3Q9Y6N6 1575 aa10.78□□□□□ -0.68
TRAV19-201ENST00000390447 CEP164Q9UPV0 1460 aa10.77□□□□□ -0.69
TRAV19-201ENST00000390447 EHMT2Q96KQ7 1210 aa10.76□□□□□ -0.69
TRAV19-201ENST00000390447 TNIKQ9UKE5 1360 aa10.75□□□□□ -0.69
TRAV19-201ENST00000390447 DMRT2Q9Y5R5 561 aa10.74□□□□□ -0.69
TRAV19-201ENST00000390447 FANCD2Q9BXW9 1451 aa10.74□□□□□ -0.69
TRAV19-201ENST00000390447 DNMBPQ6XZF7 1577 aa10.71□□□□□ -0.69
TRAV19-201ENST00000390447 ERICH3Q5RHP9 1530 aa10.7□□□□□ -0.7
TRAV19-201ENST00000390447 CEP162Q5TB80 1403 aa10.7□□□□□ -0.7
TRAV19-201ENST00000390447 KIF27Q86VH2 1401 aa10.7□□□□□ -0.7
TRAV19-201ENST00000390447 POTEHQ6S545 545 aa10.7□□□□□ -0.7
TRAV19-201ENST00000390447 UBTFP17480 764 aaKnown RBP10.68□□□□□ -0.7
TRAV19-201ENST00000390447 NESP48681 1621 aa10.68□□□□□ -0.7
TRAV19-201ENST00000390447 FGD5Q6ZNL6 1462 aa10.68□□□□□ -0.7
TRAV19-201ENST00000390447 TRIM26Q12899 539 aaPredicted RBP10.66□□□□□ -0.7
TRAV19-201ENST00000390447 PCGF6Q9BYE7 350 aa10.66□□□□□ -0.7
TRAV19-201ENST00000390447 TOPBP1Q92547 1522 aa10.65□□□□□ -0.7
TRAV19-201ENST00000390447 KIF21AQ7Z4S6 1674 aa10.65□□□□□ -0.7
TRAV19-201ENST00000390447 PDS5BQ9NTI5 1447 aa10.65□□□□□ -0.7
TRAV19-201ENST00000390447 PRXQ9BXM0 1461 aa10.64□□□□□ -0.71
TRAV19-201ENST00000390447 RAPGEF2Q9Y4G8 1499 aa10.64□□□□□ -0.71
TRAV19-201ENST00000390447 CUX2O14529 1486 aa10.62□□□□□ -0.71
TRAV19-201ENST00000390447 WDR97A6NE52 1622 aa10.62□□□□□ -0.71
TRAV19-201ENST00000390447 CLIP1P30622 1438 aa10.59□□□□□ -0.71
TRAV19-201ENST00000390447 ABCA10Q8WWZ4 1543 aa10.59□□□□□ -0.71
TRAV19-201ENST00000390447 POLA1P09884 1462 aaPredicted RBP10.59□□□□□ -0.71
TRAV19-201ENST00000390447 URB2Q14146 1524 aaKnown RBP10.58□□□□□ -0.72
TRAV19-201ENST00000390447 CUL7Q14999 1698 aa10.57□□□□□ -0.72
TRAV19-201ENST00000390447 RNF39Q9H2S5 420 aa10.55□□□□□ -0.72
TRAV19-201ENST00000390447 RAD54L2Q9Y4B4 1467 aa10.54□□□□□ -0.72
TRAV19-201ENST00000390447 IGF1RP08069 1367 aa10.53□□□□□ -0.72
TRAV19-201ENST00000390447 VPS8Q8N3P4 1428 aa10.53□□□□□ -0.72
TRAV19-201ENST00000390447 DNAJC5BQ9UF47 199 aa10.53□□□□□ -0.72
TRAV19-201ENST00000390447 ABCA5Q8WWZ7 1642 aa10.53□□□□□ -0.72
TRAV19-201ENST00000390447 CARMIL1Q5VZK9 1371 aa10.52□□□□□ -0.73
TRAV19-201ENST00000390447 MRC2Q9UBG0 1479 aa10.51□□□□□ -0.73
TRAV19-201ENST00000390447 CTTNBP2Q8WZ74 1663 aa10.5□□□□□ -0.73
TRAV19-201ENST00000390447 HRCP23327 699 aa10.5□□□□□ -0.73
TRAV19-201ENST00000390447 TARBP1Q13395 1621 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms