RNA–Protein interactions for RNA: ENST00000428670.7

ATP2B1-204, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ATP2B1, Length 7,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-204ENST00000428670 NISCHQ9Y2I1 1504 aa15.03■□□□□ -0
ATP2B1-204ENST00000428670 DCAF8L2P0C7V8 631 aa14.53□□□□□ -0.08
ATP2B1-204ENST00000428670 SUPT5HO00267 1087 aaKnown RBP14.16□□□□□ -0.14
ATP2B1-204ENST00000428670 SHROOM4Q9ULL8 1493 aa14.12□□□□□ -0.15
ATP2B1-204ENST00000428670 EHMT2Q96KQ7 1210 aa13.53□□□□□ -0.24
ATP2B1-204ENST00000428670 PCGF6Q9BYE7 350 aa13.32□□□□□ -0.28
ATP2B1-204ENST00000428670 FAM9AQ8IZU1 332 aaPredicted RBP13.28□□□□□ -0.28
ATP2B1-204ENST00000428670 TRIM41Q8WV44 630 aa13.06□□□□□ -0.32
ATP2B1-204ENST00000428670 TTBK1Q5TCY1 1321 aaPredicted RBP13.06□□□□□ -0.32
ATP2B1-204ENST00000428670 CHIC1Q5VXU3 224 aa12.99□□□□□ -0.33
ATP2B1-204ENST00000428670 LOC105371045A0A1W2PR82 267 aa12.95□□□□□ -0.34
ATP2B1-204ENST00000428670 PPARGC1BQ86YN6 1023 aaKnown RBP12.86□□□□□ -0.35
ATP2B1-204ENST00000428670 APLP2Q06481 763 aa12.84□□□□□ -0.35
ATP2B1-204ENST00000428670 RANGAP1P46060 587 aaPredicted RBP12.83□□□□□ -0.36
ATP2B1-204ENST00000428670 HRCP23327 699 aa12.82□□□□□ -0.36
ATP2B1-204ENST00000428670 CCER1Q8TC90 406 aaPredicted RBP12.78□□□□□ -0.36
ATP2B1-204ENST00000428670 TRIM26Q12899 539 aaPredicted RBP12.76□□□□□ -0.37
ATP2B1-204ENST00000428670 ZEB1P37275 1124 aaPredicted RBP12.76□□□□□ -0.37
ATP2B1-204ENST00000428670 UBTFP17480 764 aaKnown RBP12.74□□□□□ -0.37
ATP2B1-204ENST00000428670 YTHDC1Q96MU7 727 aaKnown RBP12.58□□□□□ -0.4
ATP2B1-204ENST00000428670 PELP1Q8IZL8 1130 aaKnown RBP12.56□□□□□ -0.4
ATP2B1-204ENST00000428670 ABCC9O60706 1549 aa12.54□□□□□ -0.4
ATP2B1-204ENST00000428670 CENPBP07199 599 aaPredicted RBP12.54□□□□□ -0.4
ATP2B1-204ENST00000428670 ZCCHC6Q5VYS8 1495 aaKnown RBP12.53□□□□□ -0.4
ATP2B1-204ENST00000428670 ATP1B4Q9UN42 357 aaPredicted RBP12.51□□□□□ -0.41
ATP2B1-204ENST00000428670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
ATP2B1-204ENST00000428670 HNRNPUL2Q1KMD3 747 aaKnown RBP12.4□□□□□ -0.42
ATP2B1-204ENST00000428670 PABPN1Q86U42 306 aaKnown RBP eCLIP12.4□□□□□ -0.43
ATP2B1-204ENST00000428670 ITGAEP38570 1179 aa12.34□□□□□ -0.43
ATP2B1-204ENST00000428670 CCDC180Q9P1Z9 1646 aa12.33□□□□□ -0.44
ATP2B1-204ENST00000428670 MYO15BQ96JP2 1530 aa12.33□□□□□ -0.44
ATP2B1-204ENST00000428670 SCRIBQ14160 1630 aa12.31□□□□□ -0.44
ATP2B1-204ENST00000428670 DIEXFQ68CQ4 756 aaKnown RBP12.23□□□□□ -0.45
ATP2B1-204ENST00000428670 ERICH6Q7L0X2 663 aa12.23□□□□□ -0.45
ATP2B1-204ENST00000428670 MYT1Q01538 1121 aa12.2□□□□□ -0.46
ATP2B1-204ENST00000428670 DCAF1Q9Y4B6 1507 aa12.17□□□□□ -0.46
ATP2B1-204ENST00000428670 CSRNP3Q8WYN3 585 aa12.11□□□□□ -0.47
ATP2B1-204ENST00000428670 GTF3C3Q9Y5Q9 886 aa12.1□□□□□ -0.47
ATP2B1-204ENST00000428670 RSF1Q96T23 1441 aaPredicted RBP12.07□□□□□ -0.48
ATP2B1-204ENST00000428670 NEFLP07196 543 aa12.06□□□□□ -0.48
ATP2B1-204ENST00000428670 FAM50AQ14320 339 aaKnown RBP12.02□□□□□ -0.48
ATP2B1-204ENST00000428670 ZNF316A6NFI3 1004 aaPredicted RBP11.98□□□□□ -0.49
ATP2B1-204ENST00000428670 NEUROD1Q13562 356 aa11.97□□□□□ -0.49
ATP2B1-204ENST00000428670 CNGB1Q14028 1251 aaPredicted RBP11.96□□□□□ -0.5
ATP2B1-204ENST00000428670 POLR3GLQ9BT43 218 aa11.94□□□□□ -0.5
ATP2B1-204ENST00000428670 P3H3Q8IVL6 736 aa11.93□□□□□ -0.5
ATP2B1-204ENST00000428670 ACIN1Q9UKV3 1341 aaKnown RBP11.91□□□□□ -0.5
ATP2B1-204ENST00000428670 BCANQ96GW7 911 aa11.91□□□□□ -0.5
ATP2B1-204ENST00000428670 CECR2Q9BXF3 1484 aa11.88□□□□□ -0.51
ATP2B1-204ENST00000428670 SCAF1Q9H7N4 1312 aaKnown RBP11.87□□□□□ -0.51
ATP2B1-204ENST00000428670 TRIM52Q96A61 297 aa11.83□□□□□ -0.52
ATP2B1-204ENST00000428670 RB1CC1Q8TDY2 1594 aa11.82□□□□□ -0.52
ATP2B1-204ENST00000428670 NACADO15069 1562 aa11.81□□□□□ -0.52
ATP2B1-204ENST00000428670 CEP162Q5TB80 1403 aa11.78□□□□□ -0.52
ATP2B1-204ENST00000428670 ARID3CA6NKF2 412 aa11.78□□□□□ -0.52
ATP2B1-204ENST00000428670 CLIP1P30622 1438 aa11.74□□□□□ -0.53
ATP2B1-204ENST00000428670 MROH2BQ7Z745 1585 aa11.74□□□□□ -0.53
ATP2B1-204ENST00000428670 MYT1LQ9UL68 1186 aa11.72□□□□□ -0.53
ATP2B1-204ENST00000428670 ANP32CO43423 234 aa11.72□□□□□ -0.53
ATP2B1-204ENST00000428670 MIER1Q8N108 512 aa11.71□□□□□ -0.53
ATP2B1-204ENST00000428670 WRNQ14191 1432 aaPredicted RBP eCLIP11.7□□□□□ -0.54
ATP2B1-204ENST00000428670 ZNF326Q5BKZ1 582 aaKnown RBP11.68□□□□□ -0.54
ATP2B1-204ENST00000428670 BAZ1AQ9NRL2 1556 aaPredicted RBP11.68□□□□□ -0.54
ATP2B1-204ENST00000428670 GOLGA3Q08378 1498 aa11.68□□□□□ -0.54
ATP2B1-204ENST00000428670 SOGA1O94964 1423 aa11.68□□□□□ -0.54
ATP2B1-204ENST00000428670 FBLN2P98095 1184 aa11.68□□□□□ -0.54
ATP2B1-204ENST00000428670 TNIKQ9UKE5 1360 aa11.67□□□□□ -0.54
ATP2B1-204ENST00000428670 DDX10Q13206 875 aaKnown RBP11.66□□□□□ -0.54
ATP2B1-204ENST00000428670 EEA1Q15075 1411 aa11.65□□□□□ -0.54
ATP2B1-204ENST00000428670 ABCC8Q09428 1581 aa11.65□□□□□ -0.54
ATP2B1-204ENST00000428670 WIZO95785 1651 aa11.63□□□□□ -0.55
ATP2B1-204ENST00000428670 HIRIP3Q9BW71 556 aaPredicted RBP11.61□□□□□ -0.55
ATP2B1-204ENST00000428670 CCDC88BA6NC98 1476 aa11.61□□□□□ -0.55
ATP2B1-204ENST00000428670 BAZ1BQ9UIG0 1483 aaKnown RBP11.61□□□□□ -0.55
ATP2B1-204ENST00000428670 CHIC2Q9UKJ5 165 aa11.58□□□□□ -0.56
ATP2B1-204ENST00000428670 CEP164Q9UPV0 1460 aa11.58□□□□□ -0.56
ATP2B1-204ENST00000428670 ZNF777Q9ULD5 760 aaPredicted RBP11.57□□□□□ -0.56
ATP2B1-204ENST00000428670 TONSLQ96HA7 1378 aa11.56□□□□□ -0.56
ATP2B1-204ENST00000428670 DAXXQ9UER7 740 aaPredicted RBP11.56□□□□□ -0.56
ATP2B1-204ENST00000428670 FKBP8Q14318 412 aa11.55□□□□□ -0.56
ATP2B1-204ENST00000428670 RTL5Q5HYW3 569 aaPredicted RBP11.54□□□□□ -0.56
ATP2B1-204ENST00000428670 SLC4A1APQ9BWU0 796 aaKnown RBP11.52□□□□□ -0.56
ATP2B1-204ENST00000428670 KIF27Q86VH2 1401 aa11.49□□□□□ -0.57
ATP2B1-204ENST00000428670 CDK11AQ9UQ88 783 aaPredicted RBP11.49□□□□□ -0.57
ATP2B1-204ENST00000428670 MTUS2Q5JR59 1369 aa11.49□□□□□ -0.57
ATP2B1-204ENST00000428670 HNRNPUQ00839 825 aaKnown RBP eCLIP11.49□□□□□ -0.57
ATP2B1-204ENST00000428670 RRP7BPQ9NSQ0 103 aa11.46□□□□□ -0.57
ATP2B1-204ENST00000428670 FAM9BQ8IZU0 186 aa11.46□□□□□ -0.58
ATP2B1-204ENST00000428670 SIN3AQ96ST3 1273 aa11.45□□□□□ -0.58
ATP2B1-204ENST00000428670 KANK4Q5T7N3 995 aaPredicted RBP11.45□□□□□ -0.58
ATP2B1-204ENST00000428670 RUSC2Q8N2Y8 1516 aa11.44□□□□□ -0.58
ATP2B1-204ENST00000428670 TOP2AP11388 1531 aaKnown RBP11.44□□□□□ -0.58
ATP2B1-204ENST00000428670 VPS8Q8N3P4 1428 aa11.42□□□□□ -0.58
ATP2B1-204ENST00000428670 CLSPNQ9HAW4 1339 aa11.4□□□□□ -0.58
ATP2B1-204ENST00000428670 IRX6P78412 446 aaPredicted RBP11.4□□□□□ -0.59
ATP2B1-204ENST00000428670 CCNB3Q8WWL7 1395 aa11.39□□□□□ -0.59
ATP2B1-204ENST00000428670 SALL2Q9Y467 1007 aaPredicted RBP11.37□□□□□ -0.59
ATP2B1-204ENST00000428670 CUX2O14529 1486 aa11.36□□□□□ -0.59
ATP2B1-204ENST00000428670 SMARCA4P51532 1647 aa11.36□□□□□ -0.59
ATP2B1-204ENST00000428670 NPM2Q86SE8 214 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms