RNA–Protein interactions for RNA: ENST00000370571.6

COL24A1-201, Transcript of collagen type XXIV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL24A1, Length 6,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL24A1-201ENST00000370571 DCAF8L2P0C7V8 631 aa14.63□□□□□ -0.07
COL24A1-201ENST00000370571 PELP1Q8IZL8 1130 aaKnown RBP13.92□□□□□ -0.18
COL24A1-201ENST00000370571 EHMT2Q96KQ7 1210 aa13.61□□□□□ -0.23
COL24A1-201ENST00000370571 ERICH6Q7L0X2 663 aa13.61□□□□□ -0.23
COL24A1-201ENST00000370571 SUPT5HO00267 1087 aaKnown RBP13.55□□□□□ -0.24
COL24A1-201ENST00000370571 MYT1Q01538 1121 aa13.35□□□□□ -0.27
COL24A1-201ENST00000370571 APLP2Q06481 763 aa13.32□□□□□ -0.28
COL24A1-201ENST00000370571 FAM9AQ8IZU1 332 aaPredicted RBP13.31□□□□□ -0.28
COL24A1-201ENST00000370571 CCER1Q8TC90 406 aaPredicted RBP13.28□□□□□ -0.28
COL24A1-201ENST00000370571 NISCHQ9Y2I1 1504 aa13.23□□□□□ -0.29
COL24A1-201ENST00000370571 SHROOM4Q9ULL8 1493 aa13.21□□□□□ -0.29
COL24A1-201ENST00000370571 TTBK1Q5TCY1 1321 aaPredicted RBP13.15□□□□□ -0.3
COL24A1-201ENST00000370571 CENPBP07199 599 aaPredicted RBP13.1□□□□□ -0.31
COL24A1-201ENST00000370571 RANGAP1P46060 587 aaPredicted RBP13.01□□□□□ -0.33
COL24A1-201ENST00000370571 ATP1B4Q9UN42 357 aaPredicted RBP13□□□□□ -0.33
COL24A1-201ENST00000370571 PCGF6Q9BYE7 350 aa12.99□□□□□ -0.33
COL24A1-201ENST00000370571 YTHDC1Q96MU7 727 aaKnown RBP12.98□□□□□ -0.33
COL24A1-201ENST00000370571 NEFLP07196 543 aa12.92□□□□□ -0.34
COL24A1-201ENST00000370571 DAXXQ9UER7 740 aaPredicted RBP12.79□□□□□ -0.36
COL24A1-201ENST00000370571 MYT1LQ9UL68 1186 aa12.72□□□□□ -0.37
COL24A1-201ENST00000370571 ZEB1P37275 1124 aaPredicted RBP12.65□□□□□ -0.38
COL24A1-201ENST00000370571 CHIC1Q5VXU3 224 aa12.58□□□□□ -0.4
COL24A1-201ENST00000370571 UBTFP17480 764 aaKnown RBP12.56□□□□□ -0.4
COL24A1-201ENST00000370571 POLR3GLQ9BT43 218 aa12.55□□□□□ -0.4
COL24A1-201ENST00000370571 RTL5Q5HYW3 569 aaPredicted RBP12.5□□□□□ -0.41
COL24A1-201ENST00000370571 ZNF316A6NFI3 1004 aaPredicted RBP12.49□□□□□ -0.41
COL24A1-201ENST00000370571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.48□□□□□ -0.41
COL24A1-201ENST00000370571 CNGB1Q14028 1251 aaPredicted RBP12.48□□□□□ -0.41
COL24A1-201ENST00000370571 HNRNPUL2Q1KMD3 747 aaKnown RBP12.48□□□□□ -0.41
COL24A1-201ENST00000370571 TRIM41Q8WV44 630 aa12.47□□□□□ -0.41
COL24A1-201ENST00000370571 SLC4A1APQ9BWU0 796 aaKnown RBP12.47□□□□□ -0.41
COL24A1-201ENST00000370571 PPARGC1BQ86YN6 1023 aaKnown RBP12.41□□□□□ -0.42
COL24A1-201ENST00000370571 CLSPNQ9HAW4 1339 aa12.37□□□□□ -0.43
COL24A1-201ENST00000370571 ITGAEP38570 1179 aa12.33□□□□□ -0.44
COL24A1-201ENST00000370571 HRCP23327 699 aa12.19□□□□□ -0.46
COL24A1-201ENST00000370571 BCANQ96GW7 911 aa12.19□□□□□ -0.46
COL24A1-201ENST00000370571 EIF5BO60841 1220 aaKnown RBP12.18□□□□□ -0.46
COL24A1-201ENST00000370571 SLC24A1O60721 1099 aa12.16□□□□□ -0.46
COL24A1-201ENST00000370571 BCL11AQ9H165 835 aa12.13□□□□□ -0.47
COL24A1-201ENST00000370571 ZBTB47Q9UFB7 747 aaPredicted RBP12.06□□□□□ -0.48
COL24A1-201ENST00000370571 TRIM26Q12899 539 aaPredicted RBP12.05□□□□□ -0.48
COL24A1-201ENST00000370571 CDK11AQ9UQ88 783 aaPredicted RBP12□□□□□ -0.49
COL24A1-201ENST00000370571 GTF3C3Q9Y5Q9 886 aa11.99□□□□□ -0.49
COL24A1-201ENST00000370571 DIEXFQ68CQ4 756 aaKnown RBP11.98□□□□□ -0.49
COL24A1-201ENST00000370571 TRIM52Q96A61 297 aa11.96□□□□□ -0.5
COL24A1-201ENST00000370571 NPM2Q86SE8 214 aaKnown RBP11.94□□□□□ -0.5
COL24A1-201ENST00000370571 GLIPR1L2Q4G1C9 344 aa11.93□□□□□ -0.5
COL24A1-201ENST00000370571 FAM50AQ14320 339 aaKnown RBP11.93□□□□□ -0.5
COL24A1-201ENST00000370571 ZNF326Q5BKZ1 582 aaKnown RBP11.9□□□□□ -0.5
COL24A1-201ENST00000370571 CANXP27824 592 aaKnown RBP11.9□□□□□ -0.51
COL24A1-201ENST00000370571 NEFMP07197 916 aa11.85□□□□□ -0.51
COL24A1-201ENST00000370571 ANP32AP39687 249 aaKnown RBP11.85□□□□□ -0.51
COL24A1-201ENST00000370571 ANP32BQ92688 251 aaKnown RBP11.85□□□□□ -0.51
COL24A1-201ENST00000370571 NEUROD1Q13562 356 aa11.84□□□□□ -0.51
COL24A1-201ENST00000370571 PLPPR3Q6T4P5 718 aa11.84□□□□□ -0.51
COL24A1-201ENST00000370571 ARXQ96QS3 562 aa11.83□□□□□ -0.52
COL24A1-201ENST00000370571 FBLN2P98095 1184 aa11.83□□□□□ -0.52
COL24A1-201ENST00000370571 NBR1Q14596 966 aa11.76□□□□□ -0.53
COL24A1-201ENST00000370571 LOC105371045A0A1W2PR82 267 aa11.75□□□□□ -0.53
COL24A1-201ENST00000370571 ANP32CO43423 234 aa11.74□□□□□ -0.53
COL24A1-201ENST00000370571 HSP90AA1P07900 732 aaKnown RBP11.74□□□□□ -0.53
COL24A1-201ENST00000370571 ESF1Q9H501 851 aaKnown RBP11.73□□□□□ -0.53
COL24A1-201ENST00000370571 STAG3Q9UJ98 1225 aa11.66□□□□□ -0.54
COL24A1-201ENST00000370571 A0A0G2JS52 829 aa11.66□□□□□ -0.54
COL24A1-201ENST00000370571 ARID3CA6NKF2 412 aa11.66□□□□□ -0.54
COL24A1-201ENST00000370571 SCAF1Q9H7N4 1312 aaKnown RBP11.65□□□□□ -0.55
COL24A1-201ENST00000370571 CHGAP10645 457 aaKnown RBP11.6□□□□□ -0.55
COL24A1-201ENST00000370571 FKBP8Q14318 412 aa11.59□□□□□ -0.55
COL24A1-201ENST00000370571 ZNF777Q9ULD5 760 aaPredicted RBP11.59□□□□□ -0.55
COL24A1-201ENST00000370571 ACIN1Q9UKV3 1341 aaKnown RBP11.58□□□□□ -0.56
COL24A1-201ENST00000370571 CDK11BP21127 795 aaKnown RBP11.58□□□□□ -0.56
COL24A1-201ENST00000370571 AMER1Q5JTC6 1135 aaPredicted RBP11.56□□□□□ -0.56
COL24A1-201ENST00000370571 UPF2Q9HAU5 1272 aaKnown RBP11.56□□□□□ -0.56
COL24A1-201ENST00000370571 PABPN1Q86U42 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL24A1-201ENST00000370571 TNNT2P45379 298 aaPredicted RBP11.51□□□□□ -0.57
COL24A1-201ENST00000370571 PLEKHG5O94827 1062 aa11.51□□□□□ -0.57
COL24A1-201ENST00000370571 P3H3Q8IVL6 736 aa11.51□□□□□ -0.57
COL24A1-201ENST00000370571 ZBTB7CA1YPR0 619 aa11.5□□□□□ -0.57
COL24A1-201ENST00000370571 SALL2Q9Y467 1007 aaPredicted RBP11.48□□□□□ -0.57
COL24A1-201ENST00000370571 TULP1O00294 542 aaPredicted RBP11.46□□□□□ -0.58
COL24A1-201ENST00000370571 RTN4Q9NQC3 1192 aaKnown RBP11.46□□□□□ -0.58
COL24A1-201ENST00000370571 TRIM44Q96DX7 344 aaPredicted RBP11.45□□□□□ -0.58
COL24A1-201ENST00000370571 NPM1P06748 294 aaKnown RBP eCLIP11.44□□□□□ -0.58
COL24A1-201ENST00000370571 TPRNQ4KMQ1 711 aa11.44□□□□□ -0.58
COL24A1-201ENST00000370571 C14orf37Q86TY3 774 aa11.41□□□□□ -0.58
COL24A1-201ENST00000370571 NAP1L5Q96NT1 182 aaPredicted RBP11.4□□□□□ -0.58
COL24A1-201ENST00000370571 DNTTIP2Q5QJE6 756 aaKnown RBP11.4□□□□□ -0.58
COL24A1-201ENST00000370571 FAM9BQ8IZU0 186 aa11.4□□□□□ -0.58
COL24A1-201ENST00000370571 MYO15BQ96JP2 1530 aa11.4□□□□□ -0.58
COL24A1-201ENST00000370571 HNRNPUQ00839 825 aaKnown RBP eCLIP11.39□□□□□ -0.59
COL24A1-201ENST00000370571 CCDC136Q96JN2 1154 aa11.39□□□□□ -0.59
COL24A1-201ENST00000370571 SENP3Q9H4L4 574 aaPredicted RBP11.38□□□□□ -0.59
COL24A1-201ENST00000370571 IRX6P78412 446 aaPredicted RBP11.38□□□□□ -0.59
COL24A1-201ENST00000370571 NCLP19338 710 aaKnown RBP11.38□□□□□ -0.59
COL24A1-201ENST00000370571 PTMAP06454 111 aaKnown RBP11.37□□□□□ -0.59
COL24A1-201ENST00000370571 HAP1P54257 671 aaPredicted RBP11.37□□□□□ -0.59
COL24A1-201ENST00000370571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.36□□□□□ -0.59
COL24A1-201ENST00000370571 ABCC9O60706 1549 aa11.34□□□□□ -0.59
COL24A1-201ENST00000370571 MYH16Q9H6N6 1097 aa11.32□□□□□ -0.6
COL24A1-201ENST00000370571 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms