RNA–Protein interactions for RNA: ENST00000425664.5

SCN5A-206, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 5 BASIC

Gene SCN5A, Length 8,450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-206ENST00000425664 DCAF8L2P0C7V8 631 aa18.42■□□□□ 0.54
SCN5A-206ENST00000425664 NISCHQ9Y2I1 1504 aa17.52■□□□□ 0.39
SCN5A-206ENST00000425664 FAM9AQ8IZU1 332 aaPredicted RBP16.81■□□□□ 0.28
SCN5A-206ENST00000425664 SUPT5HO00267 1087 aaKnown RBP16.71■□□□□ 0.27
SCN5A-206ENST00000425664 SHROOM4Q9ULL8 1493 aa16.58■□□□□ 0.25
SCN5A-206ENST00000425664 PELP1Q8IZL8 1130 aaKnown RBP16.48■□□□□ 0.23
SCN5A-206ENST00000425664 APLP2Q06481 763 aa16.33■□□□□ 0.21
SCN5A-206ENST00000425664 EHMT2Q96KQ7 1210 aa16.15■□□□□ 0.18
SCN5A-206ENST00000425664 ATP1B4Q9UN42 357 aaPredicted RBP15.88■□□□□ 0.13
SCN5A-206ENST00000425664 MYT1Q01538 1121 aa15.88■□□□□ 0.13
SCN5A-206ENST00000425664 RANGAP1P46060 587 aaPredicted RBP15.78■□□□□ 0.12
SCN5A-206ENST00000425664 PCGF6Q9BYE7 350 aa15.74■□□□□ 0.11
SCN5A-206ENST00000425664 ABCC9O60706 1549 aa15.68■□□□□ 0.1
SCN5A-206ENST00000425664 CCER1Q8TC90 406 aaPredicted RBP15.68■□□□□ 0.1
SCN5A-206ENST00000425664 MYT1LQ9UL68 1186 aa15.67■□□□□ 0.1
SCN5A-206ENST00000425664 TRIM41Q8WV44 630 aa15.66■□□□□ 0.1
SCN5A-206ENST00000425664 CENPBP07199 599 aaPredicted RBP15.64■□□□□ 0.09
SCN5A-206ENST00000425664 UBTFP17480 764 aaKnown RBP15.61■□□□□ 0.09
SCN5A-206ENST00000425664 ERICH6Q7L0X2 663 aa15.58■□□□□ 0.08
SCN5A-206ENST00000425664 ZEB1P37275 1124 aaPredicted RBP15.55■□□□□ 0.08
SCN5A-206ENST00000425664 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.54■□□□□ 0.08
SCN5A-206ENST00000425664 HNRNPUL2Q1KMD3 747 aaKnown RBP15.54■□□□□ 0.08
SCN5A-206ENST00000425664 TTBK1Q5TCY1 1321 aaPredicted RBP15.52■□□□□ 0.08
SCN5A-206ENST00000425664 PABPN1Q86U42 306 aaKnown RBP eCLIP15.43■□□□□ 0.06
SCN5A-206ENST00000425664 NEFLP07196 543 aa15.2■□□□□ 0.02
SCN5A-206ENST00000425664 FBLN2P98095 1184 aa15.18■□□□□ 0.02
SCN5A-206ENST00000425664 CHIC1Q5VXU3 224 aa15.18■□□□□ 0.02
SCN5A-206ENST00000425664 YTHDC1Q96MU7 727 aaKnown RBP15.14■□□□□ 0.01
SCN5A-206ENST00000425664 TRIM26Q12899 539 aaPredicted RBP15.01□□□□□ -0.01
SCN5A-206ENST00000425664 HRCP23327 699 aa15□□□□□ -0.01
SCN5A-206ENST00000425664 ITGAEP38570 1179 aa14.93□□□□□ -0.02
SCN5A-206ENST00000425664 SLC4A1APQ9BWU0 796 aaKnown RBP14.91□□□□□ -0.02
SCN5A-206ENST00000425664 NPM1P06748 294 aaKnown RBP eCLIP14.91□□□□□ -0.02
SCN5A-206ENST00000425664 DAXXQ9UER7 740 aaPredicted RBP14.9□□□□□ -0.02
SCN5A-206ENST00000425664 ESF1Q9H501 851 aaKnown RBP14.9□□□□□ -0.02
SCN5A-206ENST00000425664 CCDC180Q9P1Z9 1646 aa14.86□□□□□ -0.03
SCN5A-206ENST00000425664 POLR3GLQ9BT43 218 aa14.84□□□□□ -0.03
SCN5A-206ENST00000425664 BCANQ96GW7 911 aa14.82□□□□□ -0.04
SCN5A-206ENST00000425664 PPARGC1BQ86YN6 1023 aaKnown RBP14.82□□□□□ -0.04
SCN5A-206ENST00000425664 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
SCN5A-206ENST00000425664 SCRIBQ14160 1630 aa14.8□□□□□ -0.04
SCN5A-206ENST00000425664 FAM50AQ14320 339 aaKnown RBP14.71□□□□□ -0.05
SCN5A-206ENST00000425664 CDK11AQ9UQ88 783 aaPredicted RBP14.7□□□□□ -0.06
SCN5A-206ENST00000425664 TRIM52Q96A61 297 aa14.68□□□□□ -0.06
SCN5A-206ENST00000425664 DIEXFQ68CQ4 756 aaKnown RBP14.64□□□□□ -0.07
SCN5A-206ENST00000425664 LOC105371045A0A1W2PR82 267 aa14.6□□□□□ -0.07
SCN5A-206ENST00000425664 PLPPR3Q6T4P5 718 aa14.59□□□□□ -0.07
SCN5A-206ENST00000425664 STAG3Q9UJ98 1225 aa14.59□□□□□ -0.07
SCN5A-206ENST00000425664 ERCC6Q03468 1493 aa14.57□□□□□ -0.08
SCN5A-206ENST00000425664 CHMP7Q8WUX9 453 aaPredicted RBP14.56□□□□□ -0.08
SCN5A-206ENST00000425664 RTL5Q5HYW3 569 aaPredicted RBP14.56□□□□□ -0.08
SCN5A-206ENST00000425664 ARID3CA6NKF2 412 aa14.53□□□□□ -0.08
SCN5A-206ENST00000425664 ZNF777Q9ULD5 760 aaPredicted RBP14.51□□□□□ -0.09
SCN5A-206ENST00000425664 NACADO15069 1562 aa14.51□□□□□ -0.09
SCN5A-206ENST00000425664 ZNF316A6NFI3 1004 aaPredicted RBP14.5□□□□□ -0.09
SCN5A-206ENST00000425664 NEFMP07197 916 aa14.49□□□□□ -0.09
SCN5A-206ENST00000425664 CNGB1Q14028 1251 aaPredicted RBP14.48□□□□□ -0.09
SCN5A-206ENST00000425664 P3H3Q8IVL6 736 aa14.47□□□□□ -0.09
SCN5A-206ENST00000425664 SLC24A1O60721 1099 aa14.45□□□□□ -0.1
SCN5A-206ENST00000425664 GTF3C3Q9Y5Q9 886 aa14.43□□□□□ -0.1
SCN5A-206ENST00000425664 ZBTB47Q9UFB7 747 aaPredicted RBP14.42□□□□□ -0.1
SCN5A-206ENST00000425664 ZNF326Q5BKZ1 582 aaKnown RBP14.42□□□□□ -0.1
SCN5A-206ENST00000425664 ZCCHC6Q5VYS8 1495 aaKnown RBP14.37□□□□□ -0.11
SCN5A-206ENST00000425664 CHGAP10645 457 aaKnown RBP14.35□□□□□ -0.11
SCN5A-206ENST00000425664 TRHP20396 242 aaPredicted RBP14.35□□□□□ -0.11
SCN5A-206ENST00000425664 CLSPNQ9HAW4 1339 aa14.34□□□□□ -0.11
SCN5A-206ENST00000425664 ARID4BQ4LE39 1312 aaPredicted RBP14.32□□□□□ -0.12
SCN5A-206ENST00000425664 CSRNP3Q8WYN3 585 aa14.3□□□□□ -0.12
SCN5A-206ENST00000425664 BAZ1BQ9UIG0 1483 aaKnown RBP14.3□□□□□ -0.12
SCN5A-206ENST00000425664 NEUROD1Q13562 356 aa14.29□□□□□ -0.12
SCN5A-206ENST00000425664 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
SCN5A-206ENST00000425664 TSPY4P0CV99 314 aa14.22□□□□□ -0.13
SCN5A-206ENST00000425664 TSPY10P0CW01 314 aa14.22□□□□□ -0.13
SCN5A-206ENST00000425664 C14orf37Q86TY3 774 aa14.21□□□□□ -0.13
SCN5A-206ENST00000425664 ACIN1Q9UKV3 1341 aaKnown RBP14.19□□□□□ -0.14
SCN5A-206ENST00000425664 KCNH8Q96L42 1107 aa14.19□□□□□ -0.14
SCN5A-206ENST00000425664 PPP1R15AO75807 674 aaPredicted RBP14.18□□□□□ -0.14
SCN5A-206ENST00000425664 ANP32CO43423 234 aa14.18□□□□□ -0.14
SCN5A-206ENST00000425664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.16□□□□□ -0.14
SCN5A-206ENST00000425664 CANXP27824 592 aaKnown RBP14.16□□□□□ -0.14
SCN5A-206ENST00000425664 PLEKHD1A6NEE1 506 aa14.14□□□□□ -0.15
SCN5A-206ENST00000425664 HAP1P54257 671 aaPredicted RBP14.12□□□□□ -0.15
SCN5A-206ENST00000425664 A0A0G2JS52 829 aa14.1□□□□□ -0.15
SCN5A-206ENST00000425664 MTUS2Q5JR59 1369 aa14.09□□□□□ -0.15
SCN5A-206ENST00000425664 NPM2Q86SE8 214 aaKnown RBP14.08□□□□□ -0.16
SCN5A-206ENST00000425664 ANP32AP39687 249 aaKnown RBP14.07□□□□□ -0.16
SCN5A-206ENST00000425664 PDS5BQ9NTI5 1447 aa14.03□□□□□ -0.16
SCN5A-206ENST00000425664 BAZ1AQ9NRL2 1556 aaPredicted RBP14.01□□□□□ -0.17
SCN5A-206ENST00000425664 RSF1Q96T23 1441 aaPredicted RBP14□□□□□ -0.17
SCN5A-206ENST00000425664 DCAF1Q9Y4B6 1507 aa13.99□□□□□ -0.17
SCN5A-206ENST00000425664 GLIPR1L2Q4G1C9 344 aa13.97□□□□□ -0.17
SCN5A-206ENST00000425664 ANP32BQ92688 251 aaKnown RBP13.97□□□□□ -0.17
SCN5A-206ENST00000425664 KIF27Q86VH2 1401 aa13.97□□□□□ -0.17
SCN5A-206ENST00000425664 SMARCA2P51531 1590 aa13.95□□□□□ -0.18
SCN5A-206ENST00000425664 AEBP2Q6ZN18 517 aaPredicted RBP13.95□□□□□ -0.18
SCN5A-206ENST00000425664 TONSLQ96HA7 1378 aa13.95□□□□□ -0.18
SCN5A-206ENST00000425664 CHIC2Q9UKJ5 165 aa13.95□□□□□ -0.18
SCN5A-206ENST00000425664 ZBTB7CA1YPR0 619 aa13.94□□□□□ -0.18
SCN5A-206ENST00000425664 HDGFP51858 240 aaKnown RBP13.92□□□□□ -0.18
SCN5A-206ENST00000425664 EIF5BO60841 1220 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms