RNA–Protein interactions for RNA: ENST00000616003.4

MID1-212, Transcript of midline 1, humanhuman

TSL 1 (best) BASIC

Gene MID1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MID1-212ENST00000616003 POTEDQ86YR6 584 aa16.07■□□□□ 0.16
MID1-212ENST00000616003 NISCHQ9Y2I1 1504 aa15.55■□□□□ 0.08
MID1-212ENST00000616003 AEBP2Q6ZN18 517 aaPredicted RBP13.99□□□□□ -0.17
MID1-212ENST00000616003 MYT1Q01538 1121 aa13.78□□□□□ -0.2
MID1-212ENST00000616003 SLC24A1O60721 1099 aa13.72□□□□□ -0.21
MID1-212ENST00000616003 PELP1Q8IZL8 1130 aaKnown RBP13.72□□□□□ -0.21
MID1-212ENST00000616003 TTBK1Q5TCY1 1321 aaPredicted RBP13.48□□□□□ -0.25
MID1-212ENST00000616003 ZCCHC6Q5VYS8 1495 aaKnown RBP13.26□□□□□ -0.29
MID1-212ENST00000616003 SHROOM4Q9ULL8 1493 aa13.25□□□□□ -0.29
MID1-212ENST00000616003 CCDC180Q9P1Z9 1646 aa13.24□□□□□ -0.29
MID1-212ENST00000616003 CHIC1Q5VXU3 224 aa13.19□□□□□ -0.3
MID1-212ENST00000616003 SUPT5HO00267 1087 aaKnown RBP13.06□□□□□ -0.32
MID1-212ENST00000616003 PRKCSHP14314 528 aaPredicted RBP13.03□□□□□ -0.32
MID1-212ENST00000616003 MYO15BQ96JP2 1530 aa13.02□□□□□ -0.33
MID1-212ENST00000616003 HRCP23327 699 aa13.01□□□□□ -0.33
MID1-212ENST00000616003 ERICH6Q7L0X2 663 aa12.98□□□□□ -0.33
MID1-212ENST00000616003 APLP2Q06481 763 aa12.94□□□□□ -0.34
MID1-212ENST00000616003 DAXXQ9UER7 740 aaPredicted RBP12.88□□□□□ -0.35
MID1-212ENST00000616003 DCAF1Q9Y4B6 1507 aa12.85□□□□□ -0.35
MID1-212ENST00000616003 PCGF6Q9BYE7 350 aa12.71□□□□□ -0.37
MID1-212ENST00000616003 ABCC9O60706 1549 aa12.62□□□□□ -0.39
MID1-212ENST00000616003 PPARGC1BQ86YN6 1023 aaKnown RBP12.56□□□□□ -0.4
MID1-212ENST00000616003 DCAF8L2P0C7V8 631 aa12.49□□□□□ -0.41
MID1-212ENST00000616003 TRIM26Q12899 539 aaPredicted RBP12.49□□□□□ -0.41
MID1-212ENST00000616003 LOC105371045A0A1W2PR82 267 aa12.43□□□□□ -0.42
MID1-212ENST00000616003 ZEB1P37275 1124 aaPredicted RBP12.39□□□□□ -0.43
MID1-212ENST00000616003 RSF1Q96T23 1441 aaPredicted RBP12.35□□□□□ -0.43
MID1-212ENST00000616003 RB1CC1Q8TDY2 1594 aa12.35□□□□□ -0.43
MID1-212ENST00000616003 SCRIBQ14160 1630 aa12.31□□□□□ -0.44
MID1-212ENST00000616003 BCL11AQ9H165 835 aa12.25□□□□□ -0.45
MID1-212ENST00000616003 TRIM41Q8WV44 630 aa12.2□□□□□ -0.46
MID1-212ENST00000616003 EIF5BO60841 1220 aaKnown RBP12.19□□□□□ -0.46
MID1-212ENST00000616003 NCBP3Q53F19 620 aaKnown RBP12.18□□□□□ -0.46
MID1-212ENST00000616003 EIF4G1Q04637 1599 aaKnown RBP12.12□□□□□ -0.47
MID1-212ENST00000616003 SCAF1Q9H7N4 1312 aaKnown RBP12.1□□□□□ -0.47
MID1-212ENST00000616003 NACADO15069 1562 aa12.1□□□□□ -0.47
MID1-212ENST00000616003 POTEHQ6S545 545 aa12.09□□□□□ -0.47
MID1-212ENST00000616003 SENP3Q9H4L4 574 aaPredicted RBP12.09□□□□□ -0.47
MID1-212ENST00000616003 BAZ1AQ9NRL2 1556 aaPredicted RBP12.09□□□□□ -0.47
MID1-212ENST00000616003 MROH2BQ7Z745 1585 aa12.06□□□□□ -0.48
MID1-212ENST00000616003 FAM9AQ8IZU1 332 aaPredicted RBP12.03□□□□□ -0.48
MID1-212ENST00000616003 WIZO95785 1651 aa12.02□□□□□ -0.48
MID1-212ENST00000616003 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.48
MID1-212ENST00000616003 WRNQ14191 1432 aaPredicted RBP eCLIP11.98□□□□□ -0.49
MID1-212ENST00000616003 ACIN1Q9UKV3 1341 aaKnown RBP11.92□□□□□ -0.5
MID1-212ENST00000616003 TOP2AP11388 1531 aaKnown RBP11.92□□□□□ -0.5
MID1-212ENST00000616003 ARXQ96QS3 562 aa11.9□□□□□ -0.5
MID1-212ENST00000616003 CCER1Q8TC90 406 aaPredicted RBP11.89□□□□□ -0.51
MID1-212ENST00000616003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.86□□□□□ -0.51
MID1-212ENST00000616003 CEP162Q5TB80 1403 aa11.86□□□□□ -0.51
MID1-212ENST00000616003 CENPBP07199 599 aaPredicted RBP11.85□□□□□ -0.51
MID1-212ENST00000616003 RANGAP1P46060 587 aaPredicted RBP11.85□□□□□ -0.51
MID1-212ENST00000616003 EHMT2Q96KQ7 1210 aa11.85□□□□□ -0.51
MID1-212ENST00000616003 RTN4Q9NQC3 1192 aaKnown RBP11.85□□□□□ -0.51
MID1-212ENST00000616003 EEA1Q15075 1411 aa11.85□□□□□ -0.51
MID1-212ENST00000616003 PLPPR3Q6T4P5 718 aa11.84□□□□□ -0.51
MID1-212ENST00000616003 NEUROD1Q13562 356 aa11.84□□□□□ -0.51
MID1-212ENST00000616003 PHF23Q9BUL5 403 aaPredicted RBP11.84□□□□□ -0.51
MID1-212ENST00000616003 SMARCA2P51531 1590 aa11.83□□□□□ -0.52
MID1-212ENST00000616003 SMARCA4P51532 1647 aa11.83□□□□□ -0.52
MID1-212ENST00000616003 ABCC8Q09428 1581 aa11.82□□□□□ -0.52
MID1-212ENST00000616003 DIEXFQ68CQ4 756 aaKnown RBP11.82□□□□□ -0.52
MID1-212ENST00000616003 CCDC88BA6NC98 1476 aa11.81□□□□□ -0.52
MID1-212ENST00000616003 TNIKQ9UKE5 1360 aa11.81□□□□□ -0.52
MID1-212ENST00000616003 PLEKHG5O94827 1062 aa11.76□□□□□ -0.53
MID1-212ENST00000616003 GTF3C3Q9Y5Q9 886 aa11.74□□□□□ -0.53
MID1-212ENST00000616003 GOLGA3Q08378 1498 aa11.74□□□□□ -0.53
MID1-212ENST00000616003 SOGA1O94964 1423 aa11.72□□□□□ -0.53
MID1-212ENST00000616003 MSH5O43196 834 aa11.71□□□□□ -0.53
MID1-212ENST00000616003 KIF21BO75037 1637 aa11.7□□□□□ -0.54
MID1-212ENST00000616003 UNC13AQ9UPW8 1703 aa11.69□□□□□ -0.54
MID1-212ENST00000616003 ZNF316A6NFI3 1004 aaPredicted RBP11.67□□□□□ -0.54
MID1-212ENST00000616003 CACNB1Q02641 598 aaPredicted RBP11.66□□□□□ -0.54
MID1-212ENST00000616003 CEP164Q9UPV0 1460 aa11.65□□□□□ -0.54
MID1-212ENST00000616003 TIMELESSQ9UNS1 1208 aa11.64□□□□□ -0.55
MID1-212ENST00000616003 PEG3Q9GZU2 1588 aa11.64□□□□□ -0.55
MID1-212ENST00000616003 CSRNP3Q8WYN3 585 aa11.63□□□□□ -0.55
MID1-212ENST00000616003 RUSC2Q8N2Y8 1516 aa11.62□□□□□ -0.55
MID1-212ENST00000616003 BAZ1BQ9UIG0 1483 aaKnown RBP11.62□□□□□ -0.55
MID1-212ENST00000616003 KLHL34Q8N239 644 aa11.62□□□□□ -0.55
MID1-212ENST00000616003 PODXL2Q9NZ53 605 aa11.6□□□□□ -0.55
MID1-212ENST00000616003 VPS8Q8N3P4 1428 aa11.59□□□□□ -0.55
MID1-212ENST00000616003 SYNJ1O43426 1573 aa11.59□□□□□ -0.55
MID1-212ENST00000616003 CLIP1P30622 1438 aa11.57□□□□□ -0.56
MID1-212ENST00000616003 UBTFP17480 764 aaKnown RBP11.56□□□□□ -0.56
MID1-212ENST00000616003 UBE2Q2Q8WVN8 375 aa11.56□□□□□ -0.56
MID1-212ENST00000616003 CLSPNQ9HAW4 1339 aa11.52□□□□□ -0.57
MID1-212ENST00000616003 AMER1Q5JTC6 1135 aaPredicted RBP11.51□□□□□ -0.57
MID1-212ENST00000616003 HOMEZQ8IX15 550 aa11.5□□□□□ -0.57
MID1-212ENST00000616003 MIER1Q8N108 512 aa11.49□□□□□ -0.57
MID1-212ENST00000616003 YTHDC1Q96MU7 727 aaKnown RBP11.48□□□□□ -0.57
MID1-212ENST00000616003 BICRAQ9NZM4 1560 aa11.48□□□□□ -0.57
MID1-212ENST00000616003 ERICH3Q5RHP9 1530 aa11.47□□□□□ -0.57
MID1-212ENST00000616003 RAPGEF2Q9Y4G8 1499 aa11.47□□□□□ -0.57
MID1-212ENST00000616003 TOP2BQ02880 1626 aa11.46□□□□□ -0.58
MID1-212ENST00000616003 HNRNPUL2Q1KMD3 747 aaKnown RBP11.45□□□□□ -0.58
MID1-212ENST00000616003 BIVM-ERCC5R4GMW8 1640 aa11.44□□□□□ -0.58
MID1-212ENST00000616003 TULP1O00294 542 aaPredicted RBP11.44□□□□□ -0.58
MID1-212ENST00000616003 DHX57Q6P158 1386 aaKnown RBP11.41□□□□□ -0.58
MID1-212ENST00000616003 CUX2O14529 1486 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 210.3 ms