Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.16□□□□□ -1.58
TCRBV4S1A1TA0A5B7 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.16□□□□□ -1.58
TCRBV4S1A1TA0A5B7 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TCRBV4S1A1TA0A5B7 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.16□□□□□ -1.58
TCRBV4S1A1TA0A5B7 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
TCRBV4S1A1TA0A5B7 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TCRBV4S1A1TA0A5B7 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TCRBV4S1A1TA0A5B7 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TCRBV4S1A1TA0A5B7 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
TCRBV4S1A1TA0A5B7 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TCRBV4S1A1TA0A5B7 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TCRBV4S1A1TA0A5B7 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TCRBV4S1A1TA0A5B7 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
TCRBV4S1A1TA0A5B7 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TCRBV4S1A1TA0A5B7 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.15□□□□□ -1.58
TCRBV4S1A1TA0A5B7 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TCRBV4S1A1TA0A5B7 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TCRBV4S1A1TA0A5B7 AC074141.1-201ENST00000588129 2995 ntBASIC5.15□□□□□ -1.58
TCRBV4S1A1TA0A5B7 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.15□□□□□ -1.58
TCRBV4S1A1TA0A5B7 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
TCRBV4S1A1TA0A5B7 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TCRBV4S1A1TA0A5B7 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
TCRBV4S1A1TA0A5B7 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.15□□□□□ -1.58
TCRBV4S1A1TA0A5B7 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 CXADRP1-201ENST00000398098 1095 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 RPL7P58-201ENST00000402913 758 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 RN7SKP86-201ENST00000410454 332 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 CYCSP52-201ENST00000422857 310 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 MRPS21P3-201ENST00000436696 262 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC093166.3-201ENST00000448785 303 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 VN1R38P-201ENST00000450265 887 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 RN7SL39P-201ENST00000462264 297 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 MARK2P8-201ENST00000476069 952 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC091965.3-201ENST00000506236 208 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 RN7SKP248-201ENST00000516278 305 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC090115.2-201ENST00000548060 883 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 RPL3P13-201ENST00000550415 216 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 CXADRP3-202ENST00000617265 1100 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 U1.41-201ENST00000617626 165 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AL122023.1-201ENST00000622847 530 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AL683826.1-201ENST00000624104 627 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC010325.3-201ENST00000641084 394 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 CASC19-274ENST00000642018 970 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC105235.1-201ENST00000623208 1816 ntBASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.15□□□□□ -1.59
TCRBV4S1A1TA0A5B7 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC127024.8-201ENST00000623719 2094 ntBASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 MAPK10-261ENST00000641050 3109 ntBASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 RNU1-65P-201ENST00000363919 148 ntBASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 RN7SKP237-201ENST00000364663 301 ntBASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC116036.1-201ENST00000412199 367 ntBASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 RPL23AP18-201ENST00000416139 468 ntBASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 CCNJP1-201ENST00000450600 1149 ntBASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 RN7SL165P-201ENST00000477476 291 ntBASIC5.14□□□□□ -1.59
TCRBV4S1A1TA0A5B7 OR7E22P-201ENST00000478335 1035 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms