RNA–Protein interactions for RNA: ENST00000577848.1

AP002478.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP002478.1, Length 1,455 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002478.1-201ENST00000577848 AEBP2Q6ZN18 517 aaPredicted RBP24.83■■□□□ 1.57
AP002478.1-201ENST00000577848 CHIC1Q5VXU3 224 aa24.21■■□□□ 1.47
AP002478.1-201ENST00000577848 SENP3Q9H4L4 574 aaPredicted RBP21.26■□□□□ 0.99
AP002478.1-201ENST00000577848 PHF23Q9BUL5 403 aaPredicted RBP21.19■□□□□ 0.98
AP002478.1-201ENST00000577848 PLPPR3Q6T4P5 718 aa19.65■□□□□ 0.74
AP002478.1-201ENST00000577848 FOXD1Q16676 465 aa19.64■□□□□ 0.73
AP002478.1-201ENST00000577848 POTEDQ86YR6 584 aa19.4■□□□□ 0.7
AP002478.1-201ENST00000577848 ADRA2BP18089 450 aa18.72■□□□□ 0.59
AP002478.1-201ENST00000577848 PPP6R1Q9UPN7 881 aa18.72■□□□□ 0.59
AP002478.1-201ENST00000577848 PIAS4Q8N2W9 510 aaPredicted RBP18.53■□□□□ 0.56
AP002478.1-201ENST00000577848 MSH5O43196 834 aa18.31■□□□□ 0.52
AP002478.1-201ENST00000577848 SCAF1Q9H7N4 1312 aaKnown RBP17.33■□□□□ 0.36
AP002478.1-201ENST00000577848 PPP4R3CPQ6ZMV5 832 aa17.24■□□□□ 0.35
AP002478.1-201ENST00000577848 MAPK8IP2Q13387 824 aaPredicted RBP17■□□□□ 0.31
AP002478.1-201ENST00000577848 DMRT2Q9Y5R5 561 aa16.91■□□□□ 0.3
AP002478.1-201ENST00000577848 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
AP002478.1-201ENST00000577848 CNKSR2Q8WXI2 1034 aa16.85■□□□□ 0.29
AP002478.1-201ENST00000577848 KCNA4P22459 653 aa16.61■□□□□ 0.25
AP002478.1-201ENST00000577848 RNF216Q9NWF9 866 aaPredicted RBP16.55■□□□□ 0.24
AP002478.1-201ENST00000577848 HOXD11P31277 338 aaPredicted RBP16.5■□□□□ 0.23
AP002478.1-201ENST00000577848 NPM3O75607 178 aaKnown RBP16.48■□□□□ 0.23
AP002478.1-201ENST00000577848 DCAF8L1A6NGE4 600 aa16.17■□□□□ 0.18
AP002478.1-201ENST00000577848 DNAJC5BQ9UF47 199 aa16.12■□□□□ 0.17
AP002478.1-201ENST00000577848 SLC4A1APQ9BWU0 796 aaKnown RBP15.86■□□□□ 0.13
AP002478.1-201ENST00000577848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.75■□□□□ 0.11
AP002478.1-201ENST00000577848 RNF39Q9H2S5 420 aa15.59■□□□□ 0.09
AP002478.1-201ENST00000577848 CACNB1Q02641 598 aaPredicted RBP15.59■□□□□ 0.09
AP002478.1-201ENST00000577848 SLC4A2P04920 1241 aa15.57■□□□□ 0.08
AP002478.1-201ENST00000577848 C1QBPQ07021 282 aaKnown RBP15.46■□□□□ 0.07
AP002478.1-201ENST00000577848 FOXD4L1Q9NU39 408 aa15.42■□□□□ 0.06
AP002478.1-201ENST00000577848 U3KPZ7 1027 aaPredicted RBP15.41■□□□□ 0.06
AP002478.1-201ENST00000577848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.33■□□□□ 0.04
AP002478.1-201ENST00000577848 HNRNPUL2Q1KMD3 747 aaKnown RBP15.33■□□□□ 0.04
AP002478.1-201ENST00000577848 MYCNP04198 464 aaPredicted RBP15.31■□□□□ 0.04
AP002478.1-201ENST00000577848 APLP2Q06481 763 aa15.25■□□□□ 0.03
AP002478.1-201ENST00000577848 ZBTB22O15209 634 aa15.23■□□□□ 0.03
AP002478.1-201ENST00000577848 SAMD1Q6SPF0 538 aaPredicted RBP15.22■□□□□ 0.03
AP002478.1-201ENST00000577848 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
AP002478.1-201ENST00000577848 CSRNP3Q8WYN3 585 aa15.07■□□□□ 0
AP002478.1-201ENST00000577848 CAPN15O75808 1086 aa15.01□□□□□ -0.01
AP002478.1-201ENST00000577848 SPINK5Q9NQ38 1064 aaPredicted RBP14.99□□□□□ -0.01
AP002478.1-201ENST00000577848 ZNF219Q9P2Y4 722 aaPredicted RBP14.97□□□□□ -0.01
AP002478.1-201ENST00000577848 ATXN8OSP0DMR3 200 aa14.96□□□□□ -0.01
AP002478.1-201ENST00000577848 TRHP20396 242 aaPredicted RBP14.89□□□□□ -0.03
AP002478.1-201ENST00000577848 POTEHQ6S545 545 aa14.89□□□□□ -0.03
AP002478.1-201ENST00000577848 DSG3P32926 999 aa14.77□□□□□ -0.04
AP002478.1-201ENST00000577848 ATF5Q9Y2D1 282 aaPredicted RBP14.76□□□□□ -0.05
AP002478.1-201ENST00000577848 ABCB7O75027 752 aa14.66□□□□□ -0.06
AP002478.1-201ENST00000577848 POLA2Q14181 598 aa14.61□□□□□ -0.07
AP002478.1-201ENST00000577848 ZBTB12Q9Y330 459 aaPredicted RBP14.5□□□□□ -0.09
AP002478.1-201ENST00000577848 FBLN2P98095 1184 aa14.34□□□□□ -0.11
AP002478.1-201ENST00000577848 RBM42Q9BTD8 480 aaKnown RBP14.2□□□□□ -0.14
AP002478.1-201ENST00000577848 MKRN4PQ13434 485 aaPredicted RBP14.14□□□□□ -0.15
AP002478.1-201ENST00000577848 OSCARQ8IYS5 282 aa14.1□□□□□ -0.15
AP002478.1-201ENST00000577848 SPDYE2BA6NHP3 402 aa14.04□□□□□ -0.16
AP002478.1-201ENST00000577848 SPDYE6P0CI01 402 aa14.04□□□□□ -0.16
AP002478.1-201ENST00000577848 SPDYE2Q495Y8 402 aa14.04□□□□□ -0.16
AP002478.1-201ENST00000577848 AKT1S1Q96B36 256 aa13.95□□□□□ -0.18
AP002478.1-201ENST00000577848 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
AP002478.1-201ENST00000577848 SSUH2Q9Y2M2 353 aa13.86□□□□□ -0.19
AP002478.1-201ENST00000577848 SPDYE4A6NLX3 237 aa13.83□□□□□ -0.2
AP002478.1-201ENST00000577848 REM2Q8IYK8 340 aaPredicted RBP13.76□□□□□ -0.21
AP002478.1-201ENST00000577848 PABPN1Q86U42 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
AP002478.1-201ENST00000577848 FKBP8Q14318 412 aa13.67□□□□□ -0.22
AP002478.1-201ENST00000577848 SPDYE1Q8NFV5 336 aaPredicted RBP13.67□□□□□ -0.22
AP002478.1-201ENST00000577848 CHRDL2Q6WN34 429 aa13.59□□□□□ -0.23
AP002478.1-201ENST00000577848 PITPNM1O00562 1244 aa13.58□□□□□ -0.24
AP002478.1-201ENST00000577848 PROM2Q8N271 834 aa13.57□□□□□ -0.24
AP002478.1-201ENST00000577848 STAG3Q9UJ98 1225 aa13.56□□□□□ -0.24
AP002478.1-201ENST00000577848 CLEC11AQ9Y240 323 aa13.55□□□□□ -0.24
AP002478.1-201ENST00000577848 PRR29P0C7W0 189 aa13.44□□□□□ -0.26
AP002478.1-201ENST00000577848 FXR2P51116 673 aaKnown RBP eCLIP13.38□□□□□ -0.27
AP002478.1-201ENST00000577848 FBXO3Q9UK99 471 aa13.36□□□□□ -0.27
AP002478.1-201ENST00000577848 PIP4P2Q8N4L2 257 aa13.35□□□□□ -0.27
AP002478.1-201ENST00000577848 PRKAR2AP13861 404 aaKnown RBP13.26□□□□□ -0.29
AP002478.1-201ENST00000577848 PLEKHG5O94827 1062 aa13.22□□□□□ -0.29
AP002478.1-201ENST00000577848 CHADLQ6NUI6 762 aa13.16□□□□□ -0.3
AP002478.1-201ENST00000577848 SP7Q8TDD2 431 aaPredicted RBP13.16□□□□□ -0.3
AP002478.1-201ENST00000577848 CREBZFQ9NS37 354 aa13.16□□□□□ -0.3
AP002478.1-201ENST00000577848 MIER1Q8N108 512 aa13.15□□□□□ -0.3
AP002478.1-201ENST00000577848 PLCD3Q8N3E9 789 aa13.13□□□□□ -0.31
AP002478.1-201ENST00000577848 FARP1Q9Y4F1 1045 aaPredicted RBP13.1□□□□□ -0.31
AP002478.1-201ENST00000577848 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
AP002478.1-201ENST00000577848 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
AP002478.1-201ENST00000577848 NPM1P06748 294 aaKnown RBP eCLIP13.07□□□□□ -0.32
AP002478.1-201ENST00000577848 HAX1O00165 279 aa13□□□□□ -0.33
AP002478.1-201ENST00000577848 PLSCR2Q9NRY7 297 aa13□□□□□ -0.33
AP002478.1-201ENST00000577848 MNX1P50219 401 aaPredicted RBP12.98□□□□□ -0.33
AP002478.1-201ENST00000577848 C19orf67A6NJJ6 358 aa12.93□□□□□ -0.34
AP002478.1-201ENST00000577848 KLHL34Q8N239 644 aa12.92□□□□□ -0.34
AP002478.1-201ENST00000577848 PAK3O75914 559 aaPredicted RBP12.91□□□□□ -0.34
AP002478.1-201ENST00000577848 CD44P16070 742 aaKnown RBP12.89□□□□□ -0.35
AP002478.1-201ENST00000577848 IFNLR1Q8IU57 520 aaPredicted RBP12.84□□□□□ -0.35
AP002478.1-201ENST00000577848 SPOCK2Q92563 424 aa12.79□□□□□ -0.36
AP002478.1-201ENST00000577848 NUBP1P53384 320 aa12.78□□□□□ -0.36
AP002478.1-201ENST00000577848 ZRANB1Q9UGI0 708 aa12.78□□□□□ -0.36
AP002478.1-201ENST00000577848 FAM212AQ96EL1 285 aa12.77□□□□□ -0.37
AP002478.1-201ENST00000577848 CLCN6P51797 869 aa12.76□□□□□ -0.37
AP002478.1-201ENST00000577848 EVX2Q03828 476 aa12.75□□□□□ -0.37
AP002478.1-201ENST00000577848 RASEFQ8IZ41 740 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms