RNA–Protein interactions for RNA: ENST00000269033.7

SSH2-201, Transcript of slingshot protein phosphatase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH2, Length 9,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-201ENST00000269033 DCAF8L2P0C7V8 631 aa9.98□□□□□ -0.81
SSH2-201ENST00000269033 PELP1Q8IZL8 1130 aaKnown RBP9.78□□□□□ -0.84
SSH2-201ENST00000269033 FAM9AQ8IZU1 332 aaPredicted RBP9.76□□□□□ -0.85
SSH2-201ENST00000269033 APLP2Q06481 763 aa9.46□□□□□ -0.89
SSH2-201ENST00000269033 CCER1Q8TC90 406 aaPredicted RBP9.31□□□□□ -0.92
SSH2-201ENST00000269033 NISCHQ9Y2I1 1504 aa9.25□□□□□ -0.93
SSH2-201ENST00000269033 SUPT5HO00267 1087 aaKnown RBP9.21□□□□□ -0.93
SSH2-201ENST00000269033 ERICH6Q7L0X2 663 aa9.11□□□□□ -0.95
SSH2-201ENST00000269033 CENPBP07199 599 aaPredicted RBP8.98□□□□□ -0.97
SSH2-201ENST00000269033 ZEB1P37275 1124 aaPredicted RBP8.95□□□□□ -0.98
SSH2-201ENST00000269033 NEFLP07196 543 aa8.95□□□□□ -0.98
SSH2-201ENST00000269033 YTHDC1Q96MU7 727 aaKnown RBP8.95□□□□□ -0.98
SSH2-201ENST00000269033 SHROOM4Q9ULL8 1493 aa8.89□□□□□ -0.99
SSH2-201ENST00000269033 MYT1Q01538 1121 aa8.87□□□□□ -0.99
SSH2-201ENST00000269033 DAXXQ9UER7 740 aaPredicted RBP8.86□□□□□ -0.99
SSH2-201ENST00000269033 EHMT2Q96KQ7 1210 aa8.85□□□□□ -0.99
SSH2-201ENST00000269033 ATP1B4Q9UN42 357 aaPredicted RBP8.85□□□□□ -0.99
SSH2-201ENST00000269033 MYT1LQ9UL68 1186 aa8.78□□□□□ -1
SSH2-201ENST00000269033 UBTFP17480 764 aaKnown RBP8.74□□□□□ -1.01
SSH2-201ENST00000269033 TRIM41Q8WV44 630 aa8.73□□□□□ -1.01
SSH2-201ENST00000269033 PCGF6Q9BYE7 350 aa8.69□□□□□ -1.02
SSH2-201ENST00000269033 RANGAP1P46060 587 aaPredicted RBP8.65□□□□□ -1.02
SSH2-201ENST00000269033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.64□□□□□ -1.03
SSH2-201ENST00000269033 HNRNPUL2Q1KMD3 747 aaKnown RBP8.64□□□□□ -1.03
SSH2-201ENST00000269033 TTBK1Q5TCY1 1321 aaPredicted RBP8.61□□□□□ -1.03
SSH2-201ENST00000269033 NEFMP07197 916 aa8.57□□□□□ -1.04
SSH2-201ENST00000269033 ZBTB47Q9UFB7 747 aaPredicted RBP8.57□□□□□ -1.04
SSH2-201ENST00000269033 ZNF316A6NFI3 1004 aaPredicted RBP8.56□□□□□ -1.04
SSH2-201ENST00000269033 SLC4A1APQ9BWU0 796 aaKnown RBP8.53□□□□□ -1.04
SSH2-201ENST00000269033 CLSPNQ9HAW4 1339 aa8.52□□□□□ -1.05
SSH2-201ENST00000269033 RTL5Q5HYW3 569 aaPredicted RBP8.48□□□□□ -1.05
SSH2-201ENST00000269033 POLR3GLQ9BT43 218 aa8.48□□□□□ -1.05
SSH2-201ENST00000269033 CHIC1Q5VXU3 224 aa8.4□□□□□ -1.06
SSH2-201ENST00000269033 ESF1Q9H501 851 aaKnown RBP8.38□□□□□ -1.07
SSH2-201ENST00000269033 TRIM26Q12899 539 aaPredicted RBP8.34□□□□□ -1.07
SSH2-201ENST00000269033 ITGAEP38570 1179 aa8.33□□□□□ -1.08
SSH2-201ENST00000269033 BCANQ96GW7 911 aa8.32□□□□□ -1.08
SSH2-201ENST00000269033 CANXP27824 592 aaKnown RBP8.3□□□□□ -1.08
SSH2-201ENST00000269033 SLC24A1O60721 1099 aa8.29□□□□□ -1.08
SSH2-201ENST00000269033 ANP32BQ92688 251 aaKnown RBP8.29□□□□□ -1.08
SSH2-201ENST00000269033 CDK11AQ9UQ88 783 aaPredicted RBP8.27□□□□□ -1.08
SSH2-201ENST00000269033 CDK11BP21127 795 aaKnown RBP8.26□□□□□ -1.09
SSH2-201ENST00000269033 TRIM52Q96A61 297 aa8.26□□□□□ -1.09
SSH2-201ENST00000269033 FAM50AQ14320 339 aaKnown RBP8.23□□□□□ -1.09
SSH2-201ENST00000269033 NPM1P06748 294 aaKnown RBP eCLIP8.22□□□□□ -1.09
SSH2-201ENST00000269033 ANP32CO43423 234 aa8.2□□□□□ -1.1
SSH2-201ENST00000269033 NPM2Q86SE8 214 aaKnown RBP8.2□□□□□ -1.1
SSH2-201ENST00000269033 STAG3Q9UJ98 1225 aa8.19□□□□□ -1.1
SSH2-201ENST00000269033 UPF2Q9HAU5 1272 aaKnown RBP8.19□□□□□ -1.1
SSH2-201ENST00000269033 ACIN1Q9UKV3 1341 aaKnown RBP8.17□□□□□ -1.1
SSH2-201ENST00000269033 FBLN2P98095 1184 aa8.16□□□□□ -1.1
SSH2-201ENST00000269033 CNGB1Q14028 1251 aaPredicted RBP8.16□□□□□ -1.1
SSH2-201ENST00000269033 HSP90AA1P07900 732 aaKnown RBP8.15□□□□□ -1.1
SSH2-201ENST00000269033 EIF5BO60841 1220 aaKnown RBP8.15□□□□□ -1.11
SSH2-201ENST00000269033 ANP32AP39687 249 aaKnown RBP8.12□□□□□ -1.11
SSH2-201ENST00000269033 ZNF326Q5BKZ1 582 aaKnown RBP8.12□□□□□ -1.11
SSH2-201ENST00000269033 HRCP23327 699 aa8.11□□□□□ -1.11
SSH2-201ENST00000269033 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.07□□□□□ -1.12
SSH2-201ENST00000269033 GLIPR1L2Q4G1C9 344 aa8.07□□□□□ -1.12
SSH2-201ENST00000269033 MYH16Q9H6N6 1097 aa8.07□□□□□ -1.12
SSH2-201ENST00000269033 PPARGC1BQ86YN6 1023 aaKnown RBP8.05□□□□□ -1.12
SSH2-201ENST00000269033 DIEXFQ68CQ4 756 aaKnown RBP8.05□□□□□ -1.12
SSH2-201ENST00000269033 NEUROD1Q13562 356 aa8.04□□□□□ -1.12
SSH2-201ENST00000269033 ANP32EQ9BTT0 268 aa8.01□□□□□ -1.13
SSH2-201ENST00000269033 BCL11AQ9H165 835 aa7.99□□□□□ -1.13
SSH2-201ENST00000269033 ABCC9O60706 1549 aa7.99□□□□□ -1.13
SSH2-201ENST00000269033 ZRSR1Q15695 479 aaKnown RBP7.98□□□□□ -1.13
SSH2-201ENST00000269033 CHGAP10645 457 aaKnown RBP7.97□□□□□ -1.13
SSH2-201ENST00000269033 EIF4G2P78344 907 aaKnown RBP eCLIP7.97□□□□□ -1.131e-10■■■■■ 44.8
SSH2-201ENST00000269033 NCLP19338 710 aaKnown RBP7.97□□□□□ -1.13
SSH2-201ENST00000269033 ZNF777Q9ULD5 760 aaPredicted RBP7.97□□□□□ -1.13
SSH2-201ENST00000269033 TONSLQ96HA7 1378 aa7.97□□□□□ -1.13
SSH2-201ENST00000269033 HAP1P54257 671 aaPredicted RBP7.97□□□□□ -1.13
SSH2-201ENST00000269033 SCAF1Q9H7N4 1312 aaKnown RBP7.96□□□□□ -1.14
SSH2-201ENST00000269033 C14orf37Q86TY3 774 aa7.95□□□□□ -1.14
SSH2-201ENST00000269033 WDR43Q15061 677 aaKnown RBP eCLIP7.94□□□□□ -1.14
SSH2-201ENST00000269033 PPP1R15AO75807 674 aaPredicted RBP7.94□□□□□ -1.14
SSH2-201ENST00000269033 TSPY4P0CV99 314 aa7.94□□□□□ -1.14
SSH2-201ENST00000269033 TSPY10P0CW01 314 aa7.94□□□□□ -1.14
SSH2-201ENST00000269033 CHMP4BQ9H444 224 aaKnown RBP7.94□□□□□ -1.14
SSH2-201ENST00000269033 CASC1Q6TDU7 716 aa7.94□□□□□ -1.14
SSH2-201ENST00000269033 A0A0G2JS52 829 aa7.93□□□□□ -1.14
SSH2-201ENST00000269033 GOLGA6L22H0YM25 854 aa7.93□□□□□ -1.14
SSH2-201ENST00000269033 CDCA8Q53HL2 280 aa7.93□□□□□ -1.14
SSH2-201ENST00000269033 L1TD1Q5T7N2 865 aaKnown RBP7.92□□□□□ -1.14
SSH2-201ENST00000269033 PABPN1Q86U42 306 aaKnown RBP eCLIP7.92□□□□□ -1.14
SSH2-201ENST00000269033 NRDCO43847 1150 aa7.91□□□□□ -1.14
SSH2-201ENST00000269033 NPHP1O15259 732 aa7.9□□□□□ -1.14
SSH2-201ENST00000269033 GOLGA6L6A8MZA4 724 aa7.9□□□□□ -1.14
SSH2-201ENST00000269033 BECN1Q14457 450 aa7.9□□□□□ -1.15
SSH2-201ENST00000269033 CFAP53Q96M91 514 aa7.89□□□□□ -1.15
SSH2-201ENST00000269033 TNNT2P45379 298 aaPredicted RBP7.88□□□□□ -1.15
SSH2-201ENST00000269033 HDGFP51858 240 aaKnown RBP7.88□□□□□ -1.15
SSH2-201ENST00000269033 TMC1Q8TDI8 760 aa7.87□□□□□ -1.15
SSH2-201ENST00000269033 PLPPR3Q6T4P5 718 aa7.87□□□□□ -1.15
SSH2-201ENST00000269033 TRIM44Q96DX7 344 aaPredicted RBP7.87□□□□□ -1.15
SSH2-201ENST00000269033 PNNQ9H307 717 aaKnown RBP7.86□□□□□ -1.15
SSH2-201ENST00000269033 CHMP4AQ9BY43 222 aa7.85□□□□□ -1.15
SSH2-201ENST00000269033 GOLGA2Q08379 1002 aa7.85□□□□□ -1.15
SSH2-201ENST00000269033 CHMP7Q8WUX9 453 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms