RNA–Protein interactions for RNA: ENST00000550415.2

RPL3P13-201, Transcript of ribosomal protein L3 pseudogene 13, humanhuman

BASIC

Gene RPL3P13, Length 216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P13-201ENST00000550415 CHIC1Q5VXU3 224 aa16.86■□□□□ 0.29
RPL3P13-201ENST00000550415 AEBP2Q6ZN18 517 aaPredicted RBP16.49■□□□□ 0.23
RPL3P13-201ENST00000550415 NISCHQ9Y2I1 1504 aa15.73■□□□□ 0.11
RPL3P13-201ENST00000550415 PHF23Q9BUL5 403 aaPredicted RBP14.84□□□□□ -0.03
RPL3P13-201ENST00000550415 PLPPR3Q6T4P5 718 aa14.04□□□□□ -0.16
RPL3P13-201ENST00000550415 CCDC180Q9P1Z9 1646 aa14.03□□□□□ -0.16
RPL3P13-201ENST00000550415 SENP3Q9H4L4 574 aaPredicted RBP13.99□□□□□ -0.17
RPL3P13-201ENST00000550415 ABCC9O60706 1549 aa13.59□□□□□ -0.23
RPL3P13-201ENST00000550415 NACADO15069 1562 aa13.18□□□□□ -0.3
RPL3P13-201ENST00000550415 RB1CC1Q8TDY2 1594 aa13.18□□□□□ -0.3
RPL3P13-201ENST00000550415 MYO15BQ96JP2 1530 aa13.16□□□□□ -0.3
RPL3P13-201ENST00000550415 ZCCHC6Q5VYS8 1495 aaKnown RBP13.11□□□□□ -0.31
RPL3P13-201ENST00000550415 DCAF1Q9Y4B6 1507 aa13.08□□□□□ -0.31
RPL3P13-201ENST00000550415 DCAF8L2P0C7V8 631 aa13.05□□□□□ -0.32
RPL3P13-201ENST00000550415 ADRA2BP18089 450 aa13□□□□□ -0.33
RPL3P13-201ENST00000550415 KCNA4P22459 653 aa12.88□□□□□ -0.35
RPL3P13-201ENST00000550415 PPP6R1Q9UPN7 881 aa12.85□□□□□ -0.35
RPL3P13-201ENST00000550415 EHMT2Q96KQ7 1210 aa12.84□□□□□ -0.35
RPL3P13-201ENST00000550415 FOXD1Q16676 465 aa12.82□□□□□ -0.36
RPL3P13-201ENST00000550415 UNC13AQ9UPW8 1703 aa12.79□□□□□ -0.36
RPL3P13-201ENST00000550415 SHROOM4Q9ULL8 1493 aa12.74□□□□□ -0.37
RPL3P13-201ENST00000550415 SCRIBQ14160 1630 aa12.7□□□□□ -0.38
RPL3P13-201ENST00000550415 BICRAQ9NZM4 1560 aa12.69□□□□□ -0.38
RPL3P13-201ENST00000550415 PABPN1Q86U42 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
RPL3P13-201ENST00000550415 SLC4A1APQ9BWU0 796 aaKnown RBP12.44□□□□□ -0.42
RPL3P13-201ENST00000550415 PPP4R3CPQ6ZMV5 832 aa12.42□□□□□ -0.42
RPL3P13-201ENST00000550415 EIF4G1Q04637 1599 aaKnown RBP12.39□□□□□ -0.43
RPL3P13-201ENST00000550415 NCBP3Q53F19 620 aaKnown RBP12.37□□□□□ -0.43
RPL3P13-201ENST00000550415 CSRNP3Q8WYN3 585 aa12.37□□□□□ -0.43
RPL3P13-201ENST00000550415 DNAJC5BQ9UF47 199 aa12.37□□□□□ -0.43
RPL3P13-201ENST00000550415 CC2D2AQ9P2K1 1620 aa12.32□□□□□ -0.44
RPL3P13-201ENST00000550415 PIAS4Q8N2W9 510 aaPredicted RBP12.29□□□□□ -0.44
RPL3P13-201ENST00000550415 CECR2Q9BXF3 1484 aa12.25□□□□□ -0.45
RPL3P13-201ENST00000550415 BAZ1AQ9NRL2 1556 aaPredicted RBP12.23□□□□□ -0.45
RPL3P13-201ENST00000550415 SMARCA4P51532 1647 aa12.19□□□□□ -0.46
RPL3P13-201ENST00000550415 SMARCA2P51531 1590 aa12.17□□□□□ -0.46
RPL3P13-201ENST00000550415 NCAPD3P42695 1498 aa12.14□□□□□ -0.47
RPL3P13-201ENST00000550415 ATAD2BQ9ULI0 1458 aa12.12□□□□□ -0.47
RPL3P13-201ENST00000550415 PEG3Q9GZU2 1588 aa12.12□□□□□ -0.47
RPL3P13-201ENST00000550415 HMGXB3Q12766 1538 aa12.11□□□□□ -0.47
RPL3P13-201ENST00000550415 NPM3O75607 178 aaKnown RBP12.1□□□□□ -0.47
RPL3P13-201ENST00000550415 MROH2BQ7Z745 1585 aa12.06□□□□□ -0.48
RPL3P13-201ENST00000550415 BAZ1BQ9UIG0 1483 aaKnown RBP12.04□□□□□ -0.48
RPL3P13-201ENST00000550415 RSF1Q96T23 1441 aaPredicted RBP11.96□□□□□ -0.49
RPL3P13-201ENST00000550415 CNKSR2Q8WXI2 1034 aa11.95□□□□□ -0.5
RPL3P13-201ENST00000550415 SCAF1Q9H7N4 1312 aaKnown RBP11.93□□□□□ -0.5
RPL3P13-201ENST00000550415 WIZO95785 1651 aa11.93□□□□□ -0.5
RPL3P13-201ENST00000550415 TOP2AP11388 1531 aaKnown RBP11.88□□□□□ -0.51
RPL3P13-201ENST00000550415 ZBTB22O15209 634 aa11.84□□□□□ -0.51
RPL3P13-201ENST00000550415 LAMC3Q9Y6N6 1575 aa11.84□□□□□ -0.51
RPL3P13-201ENST00000550415 CADPSQ9ULU8 1353 aa11.78□□□□□ -0.52
RPL3P13-201ENST00000550415 ERCC6Q03468 1493 aa11.77□□□□□ -0.52
RPL3P13-201ENST00000550415 PDS5BQ9NTI5 1447 aa11.77□□□□□ -0.53
RPL3P13-201ENST00000550415 NESP48681 1621 aa11.73□□□□□ -0.53
RPL3P13-201ENST00000550415 FOXD4L1Q9NU39 408 aa11.72□□□□□ -0.53
RPL3P13-201ENST00000550415 CFTRP13569 1480 aa11.71□□□□□ -0.53
RPL3P13-201ENST00000550415 CCDC88BA6NC98 1476 aa11.7□□□□□ -0.54
RPL3P13-201ENST00000550415 CUX2O14529 1486 aa11.68□□□□□ -0.54
RPL3P13-201ENST00000550415 PRDM2Q13029 1718 aa11.64□□□□□ -0.55
RPL3P13-201ENST00000550415 MSH5O43196 834 aa11.64□□□□□ -0.55
RPL3P13-201ENST00000550415 KIF21AQ7Z4S6 1674 aa11.64□□□□□ -0.55
RPL3P13-201ENST00000550415 CEP164Q9UPV0 1460 aa11.63□□□□□ -0.55
RPL3P13-201ENST00000550415 SUPT5HO00267 1087 aaKnown RBP11.63□□□□□ -0.55
RPL3P13-201ENST00000550415 FANCD2Q9BXW9 1451 aa11.63□□□□□ -0.55
RPL3P13-201ENST00000550415 THOC2Q8NI27 1593 aaKnown RBP11.62□□□□□ -0.55
RPL3P13-201ENST00000550415 MRC2Q9UBG0 1479 aa11.61□□□□□ -0.55
RPL3P13-201ENST00000550415 WDR62O43379 1518 aa11.57□□□□□ -0.56
RPL3P13-201ENST00000550415 RNF216Q9NWF9 866 aaPredicted RBP11.54□□□□□ -0.56
RPL3P13-201ENST00000550415 ABCC8Q09428 1581 aa11.54□□□□□ -0.56
RPL3P13-201ENST00000550415 URB2Q14146 1524 aaKnown RBP11.48□□□□□ -0.57
RPL3P13-201ENST00000550415 MAPK8IP2Q13387 824 aaPredicted RBP11.47□□□□□ -0.57
RPL3P13-201ENST00000550415 AMER1Q5JTC6 1135 aaPredicted RBP11.47□□□□□ -0.57
RPL3P13-201ENST00000550415 SLC24A1O60721 1099 aa11.46□□□□□ -0.57
RPL3P13-201ENST00000550415 DNMBPQ6XZF7 1577 aa11.45□□□□□ -0.58
RPL3P13-201ENST00000550415 TOPBP1Q92547 1522 aa11.44□□□□□ -0.58
RPL3P13-201ENST00000550415 IFT140Q96RY7 1462 aa11.41□□□□□ -0.58
RPL3P13-201ENST00000550415 RTN4Q9NQC3 1192 aaKnown RBP11.36□□□□□ -0.59
RPL3P13-201ENST00000550415 POLA1P09884 1462 aaPredicted RBP11.34□□□□□ -0.59
RPL3P13-201ENST00000550415 WDR97A6NE52 1622 aa11.34□□□□□ -0.59
RPL3P13-201ENST00000550415 CUX1P39880 1505 aa11.33□□□□□ -0.6
RPL3P13-201ENST00000550415 WRNQ14191 1432 aaPredicted RBP eCLIP11.32□□□□□ -0.6
RPL3P13-201ENST00000550415 FGD5Q6ZNL6 1462 aa11.32□□□□□ -0.6
RPL3P13-201ENST00000550415 SOGA1O94964 1423 aa11.3□□□□□ -0.6
RPL3P13-201ENST00000550415 ATXN8OSP0DMR3 200 aa11.3□□□□□ -0.6
RPL3P13-201ENST00000550415 HOXD11P31277 338 aaPredicted RBP11.3□□□□□ -0.6
RPL3P13-201ENST00000550415 TARBP1Q13395 1621 aaKnown RBP11.3□□□□□ -0.6
RPL3P13-201ENST00000550415 TOP2BQ02880 1626 aa11.29□□□□□ -0.6
RPL3P13-201ENST00000550415 BIVM-ERCC5R4GMW8 1640 aa11.28□□□□□ -0.6
RPL3P13-201ENST00000550415 EIF4G3O43432 1585 aaKnown RBP11.26□□□□□ -0.61
RPL3P13-201ENST00000550415 ZNF608Q9ULD9 1512 aaPredicted RBP11.25□□□□□ -0.61
RPL3P13-201ENST00000550415 DMRT2Q9Y5R5 561 aa11.25□□□□□ -0.61
RPL3P13-201ENST00000550415 RAD54L2Q9Y4B4 1467 aa11.24□□□□□ -0.61
RPL3P13-201ENST00000550415 ABCA10Q8WWZ4 1543 aa11.24□□□□□ -0.61
RPL3P13-201ENST00000550415 SLC4A2P04920 1241 aa11.23□□□□□ -0.61
RPL3P13-201ENST00000550415 DNAJC5Q9H3Z4 198 aa11.23□□□□□ -0.61
RPL3P13-201ENST00000550415 SYNJ1O43426 1573 aa11.23□□□□□ -0.61
RPL3P13-201ENST00000550415 MYCNP04198 464 aaPredicted RBP11.22□□□□□ -0.61
RPL3P13-201ENST00000550415 AQRO60306 1485 aaKnown RBP eCLIP11.2□□□□□ -0.62
RPL3P13-201ENST00000550415 GRIN2BQ13224 1484 aa11.19□□□□□ -0.62
RPL3P13-201ENST00000550415 TDRD9Q8NDG6 1382 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms