RNA–Protein interactions for RNA: ENST00000629744.2

LINC01440-210, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5 BASIC

Gene LINC01440, Length 541 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-210ENST00000629744 AEBP2Q6ZN18 517 aaPredicted RBP22.6■■□□□ 1.21
LINC01440-210ENST00000629744 CHIC1Q5VXU3 224 aa21.29■■□□□ 1
LINC01440-210ENST00000629744 SENP3Q9H4L4 574 aaPredicted RBP19.48■□□□□ 0.71
LINC01440-210ENST00000629744 PHF23Q9BUL5 403 aaPredicted RBP19.11■□□□□ 0.65
LINC01440-210ENST00000629744 FOXD1Q16676 465 aa18.09■□□□□ 0.49
LINC01440-210ENST00000629744 MSH5O43196 834 aa17.16■□□□□ 0.34
LINC01440-210ENST00000629744 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
LINC01440-210ENST00000629744 PLPPR3Q6T4P5 718 aa16.92■□□□□ 0.3
LINC01440-210ENST00000629744 PIAS4Q8N2W9 510 aaPredicted RBP16.9■□□□□ 0.3
LINC01440-210ENST00000629744 PPP6R1Q9UPN7 881 aa16.63■□□□□ 0.25
LINC01440-210ENST00000629744 ADRA2BP18089 450 aa16.59■□□□□ 0.25
LINC01440-210ENST00000629744 DMRT2Q9Y5R5 561 aa15.36■□□□□ 0.05
LINC01440-210ENST00000629744 SCAF1Q9H7N4 1312 aaKnown RBP15.34■□□□□ 0.05
LINC01440-210ENST00000629744 MAPK8IP2Q13387 824 aaPredicted RBP15.3■□□□□ 0.04
LINC01440-210ENST00000629744 NISCHQ9Y2I1 1504 aa15.16■□□□□ 0.02
LINC01440-210ENST00000629744 CACNB1Q02641 598 aaPredicted RBP14.87□□□□□ -0.03
LINC01440-210ENST00000629744 DCAF8L1A6NGE4 600 aa14.77□□□□□ -0.05
LINC01440-210ENST00000629744 PPP4R3CPQ6ZMV5 832 aa14.75□□□□□ -0.05
LINC01440-210ENST00000629744 HOXD11P31277 338 aaPredicted RBP14.68□□□□□ -0.06
LINC01440-210ENST00000629744 CNKSR2Q8WXI2 1034 aa14.58□□□□□ -0.08
LINC01440-210ENST00000629744 RNF39Q9H2S5 420 aa14.54□□□□□ -0.08
LINC01440-210ENST00000629744 RNF216Q9NWF9 866 aaPredicted RBP14.51□□□□□ -0.09
LINC01440-210ENST00000629744 C1QBPQ07021 282 aaKnown RBP14.37□□□□□ -0.11
LINC01440-210ENST00000629744 DNAJC5BQ9UF47 199 aa14.3□□□□□ -0.12
LINC01440-210ENST00000629744 NCBP3Q53F19 620 aaKnown RBP14.18□□□□□ -0.14
LINC01440-210ENST00000629744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.02□□□□□ -0.17
LINC01440-210ENST00000629744 NPM3O75607 178 aaKnown RBP13.86□□□□□ -0.19
LINC01440-210ENST00000629744 U3KPZ7 1027 aaPredicted RBP13.63□□□□□ -0.23
LINC01440-210ENST00000629744 CAPN15O75808 1086 aa13.57□□□□□ -0.24
LINC01440-210ENST00000629744 DSG3P32926 999 aa13.51□□□□□ -0.25
LINC01440-210ENST00000629744 SPINK5Q9NQ38 1064 aaPredicted RBP13.49□□□□□ -0.25
LINC01440-210ENST00000629744 POTEHQ6S545 545 aa13.41□□□□□ -0.26
LINC01440-210ENST00000629744 APLP2Q06481 763 aa13.4□□□□□ -0.26
LINC01440-210ENST00000629744 CCDC180Q9P1Z9 1646 aa13.34□□□□□ -0.27
LINC01440-210ENST00000629744 KCNA4P22459 653 aa13.31□□□□□ -0.28
LINC01440-210ENST00000629744 ZNF219Q9P2Y4 722 aaPredicted RBP13.29□□□□□ -0.28
LINC01440-210ENST00000629744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.28□□□□□ -0.28
LINC01440-210ENST00000629744 SLC4A2P04920 1241 aa13.28□□□□□ -0.28
LINC01440-210ENST00000629744 HNRNPUL2Q1KMD3 747 aaKnown RBP13.28□□□□□ -0.28
LINC01440-210ENST00000629744 TRHP20396 242 aaPredicted RBP13.26□□□□□ -0.29
LINC01440-210ENST00000629744 ABCB7O75027 752 aa13.18□□□□□ -0.3
LINC01440-210ENST00000629744 SAMD1Q6SPF0 538 aaPredicted RBP13.16□□□□□ -0.3
LINC01440-210ENST00000629744 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.33
LINC01440-210ENST00000629744 MYCNP04198 464 aaPredicted RBP12.91□□□□□ -0.34
LINC01440-210ENST00000629744 POLA2Q14181 598 aa12.82□□□□□ -0.36
LINC01440-210ENST00000629744 CHRDL2Q6WN34 429 aa12.77□□□□□ -0.37
LINC01440-210ENST00000629744 ZCCHC6Q5VYS8 1495 aaKnown RBP12.69□□□□□ -0.38
LINC01440-210ENST00000629744 ABCC9O60706 1549 aa12.68□□□□□ -0.38
LINC01440-210ENST00000629744 SLC4A1APQ9BWU0 796 aaKnown RBP12.68□□□□□ -0.38
LINC01440-210ENST00000629744 ZBTB12Q9Y330 459 aaPredicted RBP12.66□□□□□ -0.38
LINC01440-210ENST00000629744 AKT1S1Q96B36 256 aa12.61□□□□□ -0.39
LINC01440-210ENST00000629744 FOXD4L1Q9NU39 408 aa12.6□□□□□ -0.39
LINC01440-210ENST00000629744 DCAF8L2P0C7V8 631 aa12.59□□□□□ -0.39
LINC01440-210ENST00000629744 DCAF1Q9Y4B6 1507 aa12.58□□□□□ -0.4
LINC01440-210ENST00000629744 MYO15BQ96JP2 1530 aa12.52□□□□□ -0.41
LINC01440-210ENST00000629744 ATF5Q9Y2D1 282 aaPredicted RBP12.49□□□□□ -0.41
LINC01440-210ENST00000629744 NACADO15069 1562 aa12.47□□□□□ -0.41
LINC01440-210ENST00000629744 SP7Q8TDD2 431 aaPredicted RBP12.45□□□□□ -0.42
LINC01440-210ENST00000629744 REM2Q8IYK8 340 aaPredicted RBP12.43□□□□□ -0.42
LINC01440-210ENST00000629744 OSCARQ8IYS5 282 aa12.42□□□□□ -0.42
LINC01440-210ENST00000629744 EHMT2Q96KQ7 1210 aa12.41□□□□□ -0.42
LINC01440-210ENST00000629744 RB1CC1Q8TDY2 1594 aa12.4□□□□□ -0.42
LINC01440-210ENST00000629744 PIP4P2Q8N4L2 257 aa12.37□□□□□ -0.43
LINC01440-210ENST00000629744 PITPNM1O00562 1244 aa12.3□□□□□ -0.44
LINC01440-210ENST00000629744 HAX1O00165 279 aa12.26□□□□□ -0.45
LINC01440-210ENST00000629744 ATXN8OSP0DMR3 200 aa12.26□□□□□ -0.45
LINC01440-210ENST00000629744 FXR2P51116 673 aaKnown RBP eCLIP12.26□□□□□ -0.45
LINC01440-210ENST00000629744 CSRNP3Q8WYN3 585 aa12.24□□□□□ -0.45
LINC01440-210ENST00000629744 SPDYE2BA6NHP3 402 aa12.19□□□□□ -0.46
LINC01440-210ENST00000629744 SPDYE6P0CI01 402 aa12.19□□□□□ -0.46
LINC01440-210ENST00000629744 FBLN2P98095 1184 aa12.19□□□□□ -0.46
LINC01440-210ENST00000629744 SPDYE2Q495Y8 402 aa12.19□□□□□ -0.46
LINC01440-210ENST00000629744 ZBTB22O15209 634 aa12.18□□□□□ -0.46
LINC01440-210ENST00000629744 SHROOM4Q9ULL8 1493 aa12.18□□□□□ -0.46
LINC01440-210ENST00000629744 SCRIBQ14160 1630 aa12.16□□□□□ -0.46
LINC01440-210ENST00000629744 UNC13AQ9UPW8 1703 aa12.08□□□□□ -0.48
LINC01440-210ENST00000629744 SPDYE1Q8NFV5 336 aaPredicted RBP12.06□□□□□ -0.48
LINC01440-210ENST00000629744 CLEC11AQ9Y240 323 aa12.02□□□□□ -0.49
LINC01440-210ENST00000629744 PRKAR2AP13861 404 aaKnown RBP12.01□□□□□ -0.49
LINC01440-210ENST00000629744 ZNF692Q9BU19 519 aaPredicted RBP11.97□□□□□ -0.49
LINC01440-210ENST00000629744 EVX2Q03828 476 aa11.96□□□□□ -0.49
LINC01440-210ENST00000629744 SSUH2Q9Y2M2 353 aa11.95□□□□□ -0.5
LINC01440-210ENST00000629744 BICRAQ9NZM4 1560 aa11.93□□□□□ -0.5
LINC01440-210ENST00000629744 MKRN4PQ13434 485 aaPredicted RBP11.92□□□□□ -0.5
LINC01440-210ENST00000629744 PABPN1Q86U42 306 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC01440-210ENST00000629744 C19orf67A6NJJ6 358 aa11.88□□□□□ -0.51
LINC01440-210ENST00000629744 PRR29P0C7W0 189 aa11.8□□□□□ -0.52
LINC01440-210ENST00000629744 GABBR2O75899 941 aa11.77□□□□□ -0.53
LINC01440-210ENST00000629744 CHADLQ6NUI6 762 aa11.76□□□□□ -0.53
LINC01440-210ENST00000629744 BAZ1AQ9NRL2 1556 aaPredicted RBP11.75□□□□□ -0.53
LINC01440-210ENST00000629744 CECR2Q9BXF3 1484 aa11.74□□□□□ -0.53
LINC01440-210ENST00000629744 SUPT5HO00267 1087 aaKnown RBP11.7□□□□□ -0.54
LINC01440-210ENST00000629744 SMARCA4P51532 1647 aa11.68□□□□□ -0.54
LINC01440-210ENST00000629744 RSF1Q96T23 1441 aaPredicted RBP11.68□□□□□ -0.54
LINC01440-210ENST00000629744 LHX8Q68G74 356 aa11.66□□□□□ -0.54
LINC01440-210ENST00000629744 MROH2BQ7Z745 1585 aa11.66□□□□□ -0.54
LINC01440-210ENST00000629744 EIF4G1Q04637 1599 aaKnown RBP11.63□□□□□ -0.55
LINC01440-210ENST00000629744 CD44P16070 742 aaKnown RBP11.62□□□□□ -0.55
LINC01440-210ENST00000629744 CLCN6P51797 869 aa11.62□□□□□ -0.55
LINC01440-210ENST00000629744 FARP1Q9Y4F1 1045 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms