RNA–Protein interactions for RNA: ENST00000274432.12

SPATA9-201, Transcript of spermatogenesis associated 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPATA9, Length 1,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-201ENST00000274432 AEBP2Q6ZN18 517 aaPredicted RBP20.54■□□□□ 0.88
SPATA9-201ENST00000274432 CHIC1Q5VXU3 224 aa19.67■□□□□ 0.74
SPATA9-201ENST00000274432 SENP3Q9H4L4 574 aaPredicted RBP17.69■□□□□ 0.42
SPATA9-201ENST00000274432 PHF23Q9BUL5 403 aaPredicted RBP17.38■□□□□ 0.37
SPATA9-201ENST00000274432 FOXD1Q16676 465 aa16.35■□□□□ 0.21
SPATA9-201ENST00000274432 PLPPR3Q6T4P5 718 aa15.81■□□□□ 0.12
SPATA9-201ENST00000274432 NISCHQ9Y2I1 1504 aa15.63■□□□□ 0.09
SPATA9-201ENST00000274432 MSH5O43196 834 aa15.44■□□□□ 0.06
SPATA9-201ENST00000274432 PIAS4Q8N2W9 510 aaPredicted RBP15.34■□□□□ 0.05
SPATA9-201ENST00000274432 PPP6R1Q9UPN7 881 aa15.33■□□□□ 0.04
SPATA9-201ENST00000274432 ADRA2BP18089 450 aa15.3■□□□□ 0.04
SPATA9-201ENST00000274432 POTEDQ86YR6 584 aa14.82□□□□□ -0.04
SPATA9-201ENST00000274432 SCAF1Q9H7N4 1312 aaKnown RBP14.18□□□□□ -0.14
SPATA9-201ENST00000274432 MAPK8IP2Q13387 824 aaPredicted RBP14.01□□□□□ -0.17
SPATA9-201ENST00000274432 DMRT2Q9Y5R5 561 aa13.99□□□□□ -0.17
SPATA9-201ENST00000274432 ABCC9O60706 1549 aa13.89□□□□□ -0.19
SPATA9-201ENST00000274432 PPP4R3CPQ6ZMV5 832 aa13.84□□□□□ -0.19
SPATA9-201ENST00000274432 CCDC180Q9P1Z9 1646 aa13.78□□□□□ -0.2
SPATA9-201ENST00000274432 CNKSR2Q8WXI2 1034 aa13.59□□□□□ -0.23
SPATA9-201ENST00000274432 HOXD11P31277 338 aaPredicted RBP13.51□□□□□ -0.25
SPATA9-201ENST00000274432 DCAF8L2P0C7V8 631 aa13.48□□□□□ -0.25
SPATA9-201ENST00000274432 RNF216Q9NWF9 866 aaPredicted RBP13.46□□□□□ -0.25
SPATA9-201ENST00000274432 NCBP3Q53F19 620 aaKnown RBP13.41□□□□□ -0.26
SPATA9-201ENST00000274432 DCAF8L1A6NGE4 600 aa13.36□□□□□ -0.27
SPATA9-201ENST00000274432 DNAJC5BQ9UF47 199 aa13.18□□□□□ -0.3
SPATA9-201ENST00000274432 NPM3O75607 178 aaKnown RBP13.14□□□□□ -0.31
SPATA9-201ENST00000274432 KCNA4P22459 653 aa13.14□□□□□ -0.31
SPATA9-201ENST00000274432 CACNB1Q02641 598 aaPredicted RBP13.14□□□□□ -0.31
SPATA9-201ENST00000274432 RB1CC1Q8TDY2 1594 aa13.13□□□□□ -0.31
SPATA9-201ENST00000274432 PABPN1Q86U42 306 aaKnown RBP eCLIP13.1□□□□□ -0.31
SPATA9-201ENST00000274432 RNF39Q9H2S5 420 aa13.1□□□□□ -0.31
SPATA9-201ENST00000274432 NACADO15069 1562 aa13.07□□□□□ -0.32
SPATA9-201ENST00000274432 C1QBPQ07021 282 aaKnown RBP12.99□□□□□ -0.33
SPATA9-201ENST00000274432 ZCCHC6Q5VYS8 1495 aaKnown RBP12.93□□□□□ -0.34
SPATA9-201ENST00000274432 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.87□□□□□ -0.35
SPATA9-201ENST00000274432 MYO15BQ96JP2 1530 aa12.86□□□□□ -0.35
SPATA9-201ENST00000274432 UNC13AQ9UPW8 1703 aa12.82□□□□□ -0.36
SPATA9-201ENST00000274432 DCAF1Q9Y4B6 1507 aa12.78□□□□□ -0.36
SPATA9-201ENST00000274432 BICRAQ9NZM4 1560 aa12.77□□□□□ -0.36
SPATA9-201ENST00000274432 SCRIBQ14160 1630 aa12.77□□□□□ -0.37
SPATA9-201ENST00000274432 EHMT2Q96KQ7 1210 aa12.61□□□□□ -0.39
SPATA9-201ENST00000274432 U3KPZ7 1027 aaPredicted RBP12.56□□□□□ -0.4
SPATA9-201ENST00000274432 SHROOM4Q9ULL8 1493 aa12.55□□□□□ -0.4
SPATA9-201ENST00000274432 SLC4A1APQ9BWU0 796 aaKnown RBP12.54□□□□□ -0.4
SPATA9-201ENST00000274432 SLC4A2P04920 1241 aa12.5□□□□□ -0.41
SPATA9-201ENST00000274432 CC2D2AQ9P2K1 1620 aa12.45□□□□□ -0.42
SPATA9-201ENST00000274432 EIF4G1Q04637 1599 aaKnown RBP12.44□□□□□ -0.42
SPATA9-201ENST00000274432 APLP2Q06481 763 aa12.44□□□□□ -0.42
SPATA9-201ENST00000274432 CECR2Q9BXF3 1484 aa12.43□□□□□ -0.42
SPATA9-201ENST00000274432 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.41□□□□□ -0.42
SPATA9-201ENST00000274432 HNRNPUL2Q1KMD3 747 aaKnown RBP12.41□□□□□ -0.42
SPATA9-201ENST00000274432 CAPN15O75808 1086 aa12.35□□□□□ -0.43
SPATA9-201ENST00000274432 SPINK5Q9NQ38 1064 aaPredicted RBP12.33□□□□□ -0.44
SPATA9-201ENST00000274432 SAMD1Q6SPF0 538 aaPredicted RBP12.29□□□□□ -0.44
SPATA9-201ENST00000274432 DSG3P32926 999 aa12.26□□□□□ -0.45
SPATA9-201ENST00000274432 ZNF219Q9P2Y4 722 aaPredicted RBP12.26□□□□□ -0.45
SPATA9-201ENST00000274432 CSRNP3Q8WYN3 585 aa12.24□□□□□ -0.45
SPATA9-201ENST00000274432 MYCNP04198 464 aaPredicted RBP12.18□□□□□ -0.46
SPATA9-201ENST00000274432 TRHP20396 242 aaPredicted RBP12.17□□□□□ -0.46
SPATA9-201ENST00000274432 ATAD2BQ9ULI0 1458 aa12.14□□□□□ -0.47
SPATA9-201ENST00000274432 SMARCA4P51532 1647 aa12.12□□□□□ -0.47
SPATA9-201ENST00000274432 ZBTB22O15209 634 aa12.12□□□□□ -0.47
SPATA9-201ENST00000274432 MROH2BQ7Z745 1585 aa12.11□□□□□ -0.47
SPATA9-201ENST00000274432 NCAPD3P42695 1498 aa12.11□□□□□ -0.47
SPATA9-201ENST00000274432 FOXD4L1Q9NU39 408 aa12.1□□□□□ -0.47
SPATA9-201ENST00000274432 BAZ1AQ9NRL2 1556 aaPredicted RBP12.07□□□□□ -0.48
SPATA9-201ENST00000274432 ABCB7O75027 752 aa12.04□□□□□ -0.48
SPATA9-201ENST00000274432 SMARCA2P51531 1590 aa12.04□□□□□ -0.48
SPATA9-201ENST00000274432 BAZ1BQ9UIG0 1483 aaKnown RBP12.03□□□□□ -0.48
SPATA9-201ENST00000274432 NESP48681 1621 aa11.99□□□□□ -0.49
SPATA9-201ENST00000274432 WIZO95785 1651 aa11.97□□□□□ -0.49
SPATA9-201ENST00000274432 HMGXB3Q12766 1538 aa11.96□□□□□ -0.5
SPATA9-201ENST00000274432 ERCC6Q03468 1493 aa11.94□□□□□ -0.5
SPATA9-201ENST00000274432 RSF1Q96T23 1441 aaPredicted RBP11.94□□□□□ -0.5
SPATA9-201ENST00000274432 PEG3Q9GZU2 1588 aa11.92□□□□□ -0.5
SPATA9-201ENST00000274432 POLA2Q14181 598 aa11.88□□□□□ -0.51
SPATA9-201ENST00000274432 RBM42Q9BTD8 480 aaKnown RBP11.84□□□□□ -0.51
SPATA9-201ENST00000274432 ATF5Q9Y2D1 282 aaPredicted RBP11.83□□□□□ -0.52
SPATA9-201ENST00000274432 CADPSQ9ULU8 1353 aa11.82□□□□□ -0.52
SPATA9-201ENST00000274432 SUPT5HO00267 1087 aaKnown RBP11.79□□□□□ -0.52
SPATA9-201ENST00000274432 ZBTB12Q9Y330 459 aaPredicted RBP11.78□□□□□ -0.52
SPATA9-201ENST00000274432 ATXN8OSP0DMR3 200 aa11.77□□□□□ -0.53
SPATA9-201ENST00000274432 PDS5BQ9NTI5 1447 aa11.77□□□□□ -0.53
SPATA9-201ENST00000274432 LAMC3Q9Y6N6 1575 aa11.76□□□□□ -0.53
SPATA9-201ENST00000274432 TOP2AP11388 1531 aaKnown RBP11.73□□□□□ -0.53
SPATA9-201ENST00000274432 CCDC88BA6NC98 1476 aa11.72□□□□□ -0.53
SPATA9-201ENST00000274432 CUX2O14529 1486 aa11.72□□□□□ -0.53
SPATA9-201ENST00000274432 KIF21AQ7Z4S6 1674 aa11.71□□□□□ -0.53
SPATA9-201ENST00000274432 DNAJC5Q9H3Z4 198 aa11.69□□□□□ -0.54
SPATA9-201ENST00000274432 FANCD2Q9BXW9 1451 aa11.67□□□□□ -0.54
SPATA9-201ENST00000274432 CFTRP13569 1480 aa11.66□□□□□ -0.54
SPATA9-201ENST00000274432 POTEHQ6S545 545 aa11.66□□□□□ -0.54
SPATA9-201ENST00000274432 THOC2Q8NI27 1593 aaKnown RBP11.65□□□□□ -0.54
SPATA9-201ENST00000274432 MRC2Q9UBG0 1479 aa11.63□□□□□ -0.55
SPATA9-201ENST00000274432 CEP164Q9UPV0 1460 aa11.63□□□□□ -0.55
SPATA9-201ENST00000274432 URB2Q14146 1524 aaKnown RBP11.56□□□□□ -0.56
SPATA9-201ENST00000274432 WDR62O43379 1518 aa11.54□□□□□ -0.56
SPATA9-201ENST00000274432 AKT1S1Q96B36 256 aa11.53□□□□□ -0.56
SPATA9-201ENST00000274432 FBLN2P98095 1184 aa11.46□□□□□ -0.57
SPATA9-201ENST00000274432 OSCARQ8IYS5 282 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms