Protein–RNA interactions for Protein: Q9Y6W3

CAPN7, Calpain-7, humanhuman

Predictions only

Length 813 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7Q9Y6W3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN7Q9Y6W3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.79■□□□□ 0.76
CAPN7Q9Y6W3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN7Q9Y6W3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN7Q9Y6W3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
CAPN7Q9Y6W3 AC139713.2-201ENST00000641328 2723 ntBASIC19.79■□□□□ 0.76
CAPN7Q9Y6W3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN7Q9Y6W3 CROCCP3-202ENST00000420820 1947 ntBASIC19.79■□□□□ 0.76
CAPN7Q9Y6W3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.79■□□□□ 0.76
CAPN7Q9Y6W3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN7Q9Y6W3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN7Q9Y6W3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN7Q9Y6W3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
CAPN7Q9Y6W3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN7Q9Y6W3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CAPN7Q9Y6W3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN7Q9Y6W3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
CAPN7Q9Y6W3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CAPN7Q9Y6W3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN7Q9Y6W3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 NOC2LP2-201ENST00000407594 1944 ntBASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN7Q9Y6W3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.77■□□□□ 0.76
CAPN7Q9Y6W3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.77■□□□□ 0.76
CAPN7Q9Y6W3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.77■□□□□ 0.76
CAPN7Q9Y6W3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN7Q9Y6W3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN7Q9Y6W3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.77■□□□□ 0.76
CAPN7Q9Y6W3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.77■□□□□ 0.76
CAPN7Q9Y6W3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN7Q9Y6W3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN7Q9Y6W3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN7Q9Y6W3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN7Q9Y6W3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN7Q9Y6W3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.77■□□□□ 0.76
CAPN7Q9Y6W3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.77■□□□□ 0.76
CAPN7Q9Y6W3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.77■□□□□ 0.76
CAPN7Q9Y6W3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN7Q9Y6W3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CAPN7Q9Y6W3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.77■□□□□ 0.76
CAPN7Q9Y6W3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN7Q9Y6W3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.77■□□□□ 0.75
CAPN7Q9Y6W3 AC068880.1-201ENST00000507289 2297 ntBASIC19.77■□□□□ 0.75
CAPN7Q9Y6W3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CAPN7Q9Y6W3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CAPN7Q9Y6W3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CAPN7Q9Y6W3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.76■□□□□ 0.75
CAPN7Q9Y6W3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.76■□□□□ 0.75
CAPN7Q9Y6W3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN7Q9Y6W3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN7Q9Y6W3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CAPN7Q9Y6W3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
CAPN7Q9Y6W3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CAPN7Q9Y6W3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN7Q9Y6W3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN7Q9Y6W3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms