Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 BICD1-207ENST00000551848 1962 ntBASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SPCS1Q9Y6A9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 SIRPAP1-201ENST00000448467 1770 ntBASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 KRT18P10-201ENST00000388836 1287 ntBASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
SPCS1Q9Y6A9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 AC068418.2-201ENST00000577309 3703 ntBASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 AC008813.1-201ENST00000536597 885 ntBASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 MED25-210ENST00000612854 801 ntTSL 5 BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 MED25-214ENST00000622402 642 ntTSL 5 BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 CHML-205ENST00000638160 705 ntTSL 3 BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC13.6□□□□□ -0.23
SPCS1Q9Y6A9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 AC018695.7-201ENST00000624587 2492 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms