Protein–RNA interactions for Protein: Q9UMS5

PHTF1, Putative homeodomain transcription factor 1, humanhuman

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1Q9UMS5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PHTF1Q9UMS5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PHTF1Q9UMS5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHTF1Q9UMS5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHTF1Q9UMS5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHTF1Q9UMS5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.39■□□□□ 0.85
PHTF1Q9UMS5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.39■□□□□ 0.85
PHTF1Q9UMS5 AC083880.1-201ENST00000608266 535 ntBASIC20.39■□□□□ 0.85
PHTF1Q9UMS5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.39■□□□□ 0.85
PHTF1Q9UMS5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PHTF1Q9UMS5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.39■□□□□ 0.85
PHTF1Q9UMS5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHTF1Q9UMS5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHTF1Q9UMS5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.39■□□□□ 0.85
PHTF1Q9UMS5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHTF1Q9UMS5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
PHTF1Q9UMS5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.39■□□□□ 0.85
PHTF1Q9UMS5 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHTF1Q9UMS5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.39■□□□□ 0.85
PHTF1Q9UMS5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHTF1Q9UMS5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHTF1Q9UMS5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHTF1Q9UMS5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PHTF1Q9UMS5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHTF1Q9UMS5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PHTF1Q9UMS5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PHTF1Q9UMS5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHTF1Q9UMS5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.38■□□□□ 0.85
PHTF1Q9UMS5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.38■□□□□ 0.85
PHTF1Q9UMS5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PHTF1Q9UMS5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.38■□□□□ 0.85
PHTF1Q9UMS5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.38■□□□□ 0.85
PHTF1Q9UMS5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHTF1Q9UMS5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHTF1Q9UMS5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PHTF1Q9UMS5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PHTF1Q9UMS5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHTF1Q9UMS5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.37■□□□□ 0.85
PHTF1Q9UMS5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.37■□□□□ 0.85
PHTF1Q9UMS5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PHTF1Q9UMS5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.37■□□□□ 0.85
PHTF1Q9UMS5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PHTF1Q9UMS5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHTF1Q9UMS5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PHTF1Q9UMS5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
PHTF1Q9UMS5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.37■□□□□ 0.85
PHTF1Q9UMS5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHTF1Q9UMS5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PHTF1Q9UMS5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHTF1Q9UMS5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.37■□□□□ 0.85
PHTF1Q9UMS5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
PHTF1Q9UMS5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 KRT18P6-201ENST00000555540 1265 ntBASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 AC125437.2-201ENST00000625180 2167 ntBASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PHTF1Q9UMS5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHTF1Q9UMS5 AL158211.5-201ENST00000623583 2518 ntBASIC20.34■□□□□ 0.85
PHTF1Q9UMS5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PHTF1Q9UMS5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PHTF1Q9UMS5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHTF1Q9UMS5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.34■□□□□ 0.85
PHTF1Q9UMS5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHTF1Q9UMS5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms