Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 ESRRAP1-201ENST00000400596 1257 ntBASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 LINC01006-201ENST00000333319 2292 ntBASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 AL162377.1-201ENST00000618844 1793 ntBASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PARPBPQ9NWS1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 HCG11-201ENST00000411553 5696 ntBASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 POM121L13P-201ENST00000422362 380 ntBASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 POU5F1P3-201ENST00000428824 1078 ntBASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 AL512408.1-201ENST00000569378 2000 ntBASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PARPBPQ9NWS1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 BX119927.1-201ENST00000636596 1552 ntBASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PARPBPQ9NWS1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms