Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
PRDM9Q9NQV7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.72■□□□□ 0.59
PRDM9Q9NQV7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRDM9Q9NQV7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRDM9Q9NQV7 RPS2P52-201ENST00000469610 820 ntBASIC18.72■□□□□ 0.59
PRDM9Q9NQV7 AC069544.1-201ENST00000609399 999 ntBASIC18.72■□□□□ 0.59
PRDM9Q9NQV7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.72■□□□□ 0.59
PRDM9Q9NQV7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRDM9Q9NQV7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.72■□□□□ 0.59
PRDM9Q9NQV7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRDM9Q9NQV7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
PRDM9Q9NQV7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
PRDM9Q9NQV7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PRDM9Q9NQV7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRDM9Q9NQV7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.72■□□□□ 0.59
PRDM9Q9NQV7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.72■□□□□ 0.59
PRDM9Q9NQV7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PRDM9Q9NQV7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PRDM9Q9NQV7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRDM9Q9NQV7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PRDM9Q9NQV7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
PRDM9Q9NQV7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRDM9Q9NQV7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.71■□□□□ 0.59
PRDM9Q9NQV7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRDM9Q9NQV7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRDM9Q9NQV7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRDM9Q9NQV7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRDM9Q9NQV7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.71■□□□□ 0.59
PRDM9Q9NQV7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
PRDM9Q9NQV7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRDM9Q9NQV7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRDM9Q9NQV7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
PRDM9Q9NQV7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PRDM9Q9NQV7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRDM9Q9NQV7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRDM9Q9NQV7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRDM9Q9NQV7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRDM9Q9NQV7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PRDM9Q9NQV7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.7■□□□□ 0.58
PRDM9Q9NQV7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PRDM9Q9NQV7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PRDM9Q9NQV7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PRDM9Q9NQV7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.7■□□□□ 0.58
PRDM9Q9NQV7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.7■□□□□ 0.58
PRDM9Q9NQV7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRDM9Q9NQV7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PRDM9Q9NQV7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRDM9Q9NQV7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 AC116351.2-201ENST00000606540 1585 ntBASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 PRORSD1P-201ENST00000295112 541 ntBASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 AC233263.1-201ENST00000578059 224 ntBASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRDM9Q9NQV7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms