Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 AC018470.1-201ENST00000624790 3129 ntBASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.53■□□□□ 0.08
MBD3L1Q8WWY6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MBD3L1Q8WWY6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.08
MBD3L1Q8WWY6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MBD3L1Q8WWY6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.52■□□□□ 0.08
MBD3L1Q8WWY6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
MBD3L1Q8WWY6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
MBD3L1Q8WWY6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.52■□□□□ 0.08
MBD3L1Q8WWY6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.52■□□□□ 0.08
MBD3L1Q8WWY6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MBD3L1Q8WWY6 AC006333.2-201ENST00000607957 2099 ntBASIC15.52■□□□□ 0.08
MBD3L1Q8WWY6 AL133373.2-201ENST00000623187 2828 ntBASIC15.52■□□□□ 0.08
MBD3L1Q8WWY6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
MBD3L1Q8WWY6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
MBD3L1Q8WWY6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
MBD3L1Q8WWY6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
MBD3L1Q8WWY6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MBD3L1Q8WWY6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MBD3L1Q8WWY6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MBD3L1Q8WWY6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
MBD3L1Q8WWY6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
MBD3L1Q8WWY6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
MBD3L1Q8WWY6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.52■□□□□ 0.07
MBD3L1Q8WWY6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
MBD3L1Q8WWY6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.52■□□□□ 0.07
MBD3L1Q8WWY6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MBD3L1Q8WWY6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MBD3L1Q8WWY6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MBD3L1Q8WWY6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.52■□□□□ 0.07
MBD3L1Q8WWY6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.52■□□□□ 0.07
MBD3L1Q8WWY6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 BICD1-207ENST00000551848 1962 ntBASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 NOC2LP1-202ENST00000452600 2235 ntBASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L1Q8WWY6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.5■□□□□ 0.07
MBD3L1Q8WWY6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC15.5■□□□□ 0.07
MBD3L1Q8WWY6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.5■□□□□ 0.07
MBD3L1Q8WWY6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L1Q8WWY6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L1Q8WWY6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L1Q8WWY6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
MBD3L1Q8WWY6 MIR3621-201ENST00000580529 85 ntBASIC15.5■□□□□ 0.07
MBD3L1Q8WWY6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L1Q8WWY6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L1Q8WWY6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L1Q8WWY6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L1Q8WWY6 AL354751.1-201ENST00000412768 1863 ntBASIC15.5■□□□□ 0.07
MBD3L1Q8WWY6 KRT16P2-201ENST00000414673 1423 ntBASIC15.5■□□□□ 0.07
MBD3L1Q8WWY6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L1Q8WWY6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L1Q8WWY6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L1Q8WWY6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L1Q8WWY6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
MBD3L1Q8WWY6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MBD3L1Q8WWY6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.49■□□□□ 0.07
MBD3L1Q8WWY6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MBD3L1Q8WWY6 AL161938.1-201ENST00000569833 2180 ntBASIC15.49■□□□□ 0.07
MBD3L1Q8WWY6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
MBD3L1Q8WWY6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MBD3L1Q8WWY6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.49■□□□□ 0.07
MBD3L1Q8WWY6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MBD3L1Q8WWY6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MBD3L1Q8WWY6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.49■□□□□ 0.07
MBD3L1Q8WWY6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.49■□□□□ 0.07
MBD3L1Q8WWY6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms