Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 AC096631.2-201ENST00000436136 790 ntBASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 AP001160.3-201ENST00000601484 763 ntBASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 OR6D1P-202ENST00000641007 5290 ntBASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC71LQ8N9Z2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.46■□□□□ 0.22
CCDC71LQ8N9Z2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC71LQ8N9Z2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.46■□□□□ 0.22
CCDC71LQ8N9Z2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC71LQ8N9Z2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC71LQ8N9Z2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.46■□□□□ 0.22
CCDC71LQ8N9Z2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 IRS3P-201ENST00000223076 1006 ntBASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 RBM17P2-201ENST00000616397 1405 ntBASIC16.45■□□□□ 0.22
CCDC71LQ8N9Z2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 AC104187.1-201ENST00000607510 612 ntBASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 AL356652.1-201ENST00000615962 565 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms