Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.59■□□□□ 0.25
VPS13CQ709C8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
VPS13CQ709C8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS13CQ709C8 AC097488.1-201ENST00000507834 756 ntBASIC16.59■□□□□ 0.25
VPS13CQ709C8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VPS13CQ709C8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.59■□□□□ 0.25
VPS13CQ709C8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS13CQ709C8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.59■□□□□ 0.25
VPS13CQ709C8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS13CQ709C8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS13CQ709C8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
VPS13CQ709C8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.59■□□□□ 0.25
VPS13CQ709C8 AL138966.2-201ENST00000621997 464 ntBASIC16.59■□□□□ 0.25
VPS13CQ709C8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS13CQ709C8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
VPS13CQ709C8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS13CQ709C8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.59■□□□□ 0.25
VPS13CQ709C8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.59■□□□□ 0.25
VPS13CQ709C8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS13CQ709C8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.59■□□□□ 0.25
VPS13CQ709C8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VPS13CQ709C8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VPS13CQ709C8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.58■□□□□ 0.25
VPS13CQ709C8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.58■□□□□ 0.25
VPS13CQ709C8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.58■□□□□ 0.25
VPS13CQ709C8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.25
VPS13CQ709C8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.58■□□□□ 0.25
VPS13CQ709C8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.58■□□□□ 0.25
VPS13CQ709C8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
VPS13CQ709C8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VPS13CQ709C8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VPS13CQ709C8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.58■□□□□ 0.24
VPS13CQ709C8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.58■□□□□ 0.24
VPS13CQ709C8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS13CQ709C8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS13CQ709C8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VPS13CQ709C8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS13CQ709C8 PLK5-205ENST00000642079 1969 ntBASIC16.58■□□□□ 0.24
VPS13CQ709C8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
VPS13CQ709C8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS13CQ709C8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS13CQ709C8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.58■□□□□ 0.24
VPS13CQ709C8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.58■□□□□ 0.24
VPS13CQ709C8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS13CQ709C8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.58■□□□□ 0.24
VPS13CQ709C8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS13CQ709C8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
VPS13CQ709C8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS13CQ709C8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS13CQ709C8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.57■□□□□ 0.24
VPS13CQ709C8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.57■□□□□ 0.24
VPS13CQ709C8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS13CQ709C8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS13CQ709C8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS13CQ709C8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS13CQ709C8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS13CQ709C8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS13CQ709C8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.57■□□□□ 0.24
VPS13CQ709C8 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS13CQ709C8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS13CQ709C8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS13CQ709C8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS13CQ709C8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS13CQ709C8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
VPS13CQ709C8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
VPS13CQ709C8 KSR1P1-201ENST00000446298 240 ntBASIC16.57■□□□□ 0.24
VPS13CQ709C8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
VPS13CQ709C8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS13CQ709C8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.56■□□□□ 0.24
VPS13CQ709C8 AC026310.3-201ENST00000625186 2373 ntBASIC16.56■□□□□ 0.24
VPS13CQ709C8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
VPS13CQ709C8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.56■□□□□ 0.24
VPS13CQ709C8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.56■□□□□ 0.24
VPS13CQ709C8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS13CQ709C8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS13CQ709C8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.56■□□□□ 0.24
VPS13CQ709C8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS13CQ709C8 RNF152P1-201ENST00000397754 604 ntBASIC16.56■□□□□ 0.24
VPS13CQ709C8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.56■□□□□ 0.24
VPS13CQ709C8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.56■□□□□ 0.24
VPS13CQ709C8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VPS13CQ709C8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS13CQ709C8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.56■□□□□ 0.24
VPS13CQ709C8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS13CQ709C8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS13CQ709C8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS13CQ709C8 FAM207BP-201ENST00000447172 505 ntBASIC16.56■□□□□ 0.24
VPS13CQ709C8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.56■□□□□ 0.24
VPS13CQ709C8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS13CQ709C8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.55■□□□□ 0.24
VPS13CQ709C8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.55■□□□□ 0.24
VPS13CQ709C8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.55■□□□□ 0.24
VPS13CQ709C8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS13CQ709C8 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.55■□□□□ 0.24
VPS13CQ709C8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
VPS13CQ709C8 TSPY5P-201ENST00000426936 936 ntBASIC16.55■□□□□ 0.24
VPS13CQ709C8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VPS13CQ709C8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
VPS13CQ709C8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.55■□□□□ 0.24
VPS13CQ709C8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms