Protein–RNA interactions for Protein: P83105

HTRA4, Serine protease HTRA4, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA4P83105 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.16■□□□□ 0.98
HTRA4P83105 MFAP1P1-201ENST00000442257 1255 ntBASIC21.16■□□□□ 0.98
HTRA4P83105 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
HTRA4P83105 CCR12P-201ENST00000446203 998 ntBASIC21.16■□□□□ 0.98
HTRA4P83105 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HTRA4P83105 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.16■□□□□ 0.98
HTRA4P83105 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HTRA4P83105 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.16■□□□□ 0.98
HTRA4P83105 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HTRA4P83105 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
HTRA4P83105 AC010653.2-201ENST00000623505 997 ntBASIC21.16■□□□□ 0.98
HTRA4P83105 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.16■□□□□ 0.98
HTRA4P83105 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HTRA4P83105 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HTRA4P83105 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HTRA4P83105 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA4P83105 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
HTRA4P83105 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.15■□□□□ 0.98
HTRA4P83105 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA4P83105 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA4P83105 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.15■□□□□ 0.98
HTRA4P83105 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA4P83105 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HTRA4P83105 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.15■□□□□ 0.98
HTRA4P83105 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
HTRA4P83105 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.15■□□□□ 0.98
HTRA4P83105 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.15■□□□□ 0.98
HTRA4P83105 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
HTRA4P83105 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.15■□□□□ 0.98
HTRA4P83105 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.15■□□□□ 0.98
HTRA4P83105 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA4P83105 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA4P83105 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA4P83105 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.15■□□□□ 0.98
HTRA4P83105 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA4P83105 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.15■□□□□ 0.98
HTRA4P83105 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.15■□□□□ 0.98
HTRA4P83105 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA4P83105 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA4P83105 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HTRA4P83105 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HTRA4P83105 PLK5-205ENST00000642079 1969 ntBASIC21.14■□□□□ 0.98
HTRA4P83105 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.14■□□□□ 0.97
HTRA4P83105 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HTRA4P83105 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HTRA4P83105 AC007663.1-201ENST00000438948 1240 ntBASIC21.14■□□□□ 0.97
HTRA4P83105 COX11P1-201ENST00000489116 835 ntBASIC21.14■□□□□ 0.97
HTRA4P83105 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HTRA4P83105 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
HTRA4P83105 AP000550.4-202ENST00000639755 178 ntBASIC21.14■□□□□ 0.97
HTRA4P83105 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HTRA4P83105 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HTRA4P83105 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HTRA4P83105 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA4P83105 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.13■□□□□ 0.97
HTRA4P83105 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA4P83105 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA4P83105 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HTRA4P83105 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA4P83105 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.13■□□□□ 0.97
HTRA4P83105 DPP3P2-201ENST00000416030 1696 ntBASIC21.13■□□□□ 0.97
HTRA4P83105 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA4P83105 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA4P83105 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA4P83105 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.13■□□□□ 0.97
HTRA4P83105 AC009947.2-201ENST00000444014 672 ntBASIC21.13■□□□□ 0.97
HTRA4P83105 FAM207BP-201ENST00000447172 505 ntBASIC21.13■□□□□ 0.97
HTRA4P83105 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.13■□□□□ 0.97
HTRA4P83105 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.13■□□□□ 0.97
HTRA4P83105 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HTRA4P83105 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.13■□□□□ 0.97
HTRA4P83105 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.13■□□□□ 0.97
HTRA4P83105 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.13■□□□□ 0.97
HTRA4P83105 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA4P83105 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
HTRA4P83105 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA4P83105 AC092338.2-201ENST00000568827 1415 ntBASIC21.12■□□□□ 0.97
HTRA4P83105 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.12■□□□□ 0.97
HTRA4P83105 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA4P83105 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.12■□□□□ 0.97
HTRA4P83105 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.12■□□□□ 0.97
HTRA4P83105 KRT18P56-201ENST00000507275 550 ntBASIC21.12■□□□□ 0.97
HTRA4P83105 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HTRA4P83105 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA4P83105 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.12■□□□□ 0.97
HTRA4P83105 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA4P83105 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA4P83105 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA4P83105 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA4P83105 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA4P83105 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA4P83105 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA4P83105 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA4P83105 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA4P83105 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HTRA4P83105 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HTRA4P83105 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HTRA4P83105 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
HTRA4P83105 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HTRA4P83105 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms