Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.63■□□□□ 0.41
CSNK1A1P48729 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1A1P48729 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CSNK1A1P48729 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.62■□□□□ 0.41
CSNK1A1P48729 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1A1P48729 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1A1P48729 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1A1P48729 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CSNK1A1P48729 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.62■□□□□ 0.41
CSNK1A1P48729 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
CSNK1A1P48729 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.62■□□□□ 0.41
CSNK1A1P48729 AC060766.5-201ENST00000590539 871 ntBASIC17.62■□□□□ 0.41
CSNK1A1P48729 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CSNK1A1P48729 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1A1P48729 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1A1P48729 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.62■□□□□ 0.41
CSNK1A1P48729 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1A1P48729 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1A1P48729 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1A1P48729 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1A1P48729 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1A1P48729 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1A1P48729 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CSNK1A1P48729 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1A1P48729 TMEM179-206ENST00000616017 1645 ntBASIC17.61■□□□□ 0.41
CSNK1A1P48729 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1A1P48729 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1A1P48729 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.61■□□□□ 0.41
CSNK1A1P48729 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.61■□□□□ 0.41
CSNK1A1P48729 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1A1P48729 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1A1P48729 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1A1P48729 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1A1P48729 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1A1P48729 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.61■□□□□ 0.41
CSNK1A1P48729 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CSNK1A1P48729 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.61■□□□□ 0.41
CSNK1A1P48729 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.61■□□□□ 0.41
CSNK1A1P48729 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.61■□□□□ 0.41
CSNK1A1P48729 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.61■□□□□ 0.41
CSNK1A1P48729 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1A1P48729 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.61■□□□□ 0.41
CSNK1A1P48729 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CSNK1A1P48729 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CSNK1A1P48729 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1A1P48729 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1A1P48729 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CSNK1A1P48729 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1A1P48729 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1A1P48729 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1A1P48729 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1A1P48729 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.6■□□□□ 0.41
CSNK1A1P48729 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1A1P48729 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1A1P48729 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1A1P48729 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1A1P48729 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.6■□□□□ 0.41
CSNK1A1P48729 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.6■□□□□ 0.41
CSNK1A1P48729 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.6■□□□□ 0.41
CSNK1A1P48729 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.6■□□□□ 0.41
CSNK1A1P48729 PNMA6B-201ENST00000538162 1200 ntBASIC17.6■□□□□ 0.41
CSNK1A1P48729 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.6■□□□□ 0.41
CSNK1A1P48729 AC006557.6-201ENST00000623071 864 ntBASIC17.6■□□□□ 0.41
CSNK1A1P48729 PHGDH-210ENST00000641115 1638 ntBASIC17.6■□□□□ 0.41
CSNK1A1P48729 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
CSNK1A1P48729 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1A1P48729 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1A1P48729 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1A1P48729 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1A1P48729 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1A1P48729 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.59■□□□□ 0.41
CSNK1A1P48729 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.59■□□□□ 0.41
CSNK1A1P48729 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CSNK1A1P48729 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1A1P48729 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.59■□□□□ 0.41
CSNK1A1P48729 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1A1P48729 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CSNK1A1P48729 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.59■□□□□ 0.41
CSNK1A1P48729 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.59■□□□□ 0.41
CSNK1A1P48729 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1A1P48729 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.59■□□□□ 0.41
CSNK1A1P48729 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CSNK1A1P48729 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1A1P48729 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.59■□□□□ 0.41
CSNK1A1P48729 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1A1P48729 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.59■□□□□ 0.41
CSNK1A1P48729 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1A1P48729 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1A1P48729 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CSNK1A1P48729 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
CSNK1A1P48729 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CSNK1A1P48729 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CSNK1A1P48729 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.58■□□□□ 0.41
CSNK1A1P48729 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.58■□□□□ 0.41
CSNK1A1P48729 AP001271.2-201ENST00000624018 1556 ntBASIC17.58■□□□□ 0.41
CSNK1A1P48729 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CSNK1A1P48729 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CSNK1A1P48729 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1A1P48729 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
CSNK1A1P48729 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms