Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MDH1P40925 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MDH1P40925 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MDH1P40925 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MDH1P40925 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
MDH1P40925 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MDH1P40925 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MDH1P40925 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MDH1P40925 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.9■□□□□ 0.78
MDH1P40925 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.9■□□□□ 0.78
MDH1P40925 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.9■□□□□ 0.78
MDH1P40925 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
MDH1P40925 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MDH1P40925 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
MDH1P40925 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MDH1P40925 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
MDH1P40925 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MDH1P40925 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.89■□□□□ 0.77
MDH1P40925 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.89■□□□□ 0.77
MDH1P40925 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
MDH1P40925 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MDH1P40925 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.89■□□□□ 0.77
MDH1P40925 NOC2LP1-202ENST00000452600 2235 ntBASIC19.89■□□□□ 0.77
MDH1P40925 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.89■□□□□ 0.77
MDH1P40925 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.89■□□□□ 0.77
MDH1P40925 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.89■□□□□ 0.77
MDH1P40925 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.89■□□□□ 0.77
MDH1P40925 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.89■□□□□ 0.77
MDH1P40925 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.89■□□□□ 0.77
MDH1P40925 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
MDH1P40925 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MDH1P40925 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
MDH1P40925 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.88■□□□□ 0.77
MDH1P40925 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
MDH1P40925 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.88■□□□□ 0.77
MDH1P40925 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MDH1P40925 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MDH1P40925 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
MDH1P40925 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MDH1P40925 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MDH1P40925 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.88■□□□□ 0.77
MDH1P40925 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
MDH1P40925 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
MDH1P40925 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.88■□□□□ 0.77
MDH1P40925 AC008175.2-201ENST00000612840 297 ntBASIC19.88■□□□□ 0.77
MDH1P40925 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MDH1P40925 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
MDH1P40925 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MDH1P40925 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
MDH1P40925 AL161938.1-201ENST00000569833 2180 ntBASIC19.88■□□□□ 0.77
MDH1P40925 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MDH1P40925 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
MDH1P40925 BICD1-207ENST00000551848 1962 ntBASIC19.88■□□□□ 0.77
MDH1P40925 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.88■□□□□ 0.77
MDH1P40925 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.88■□□□□ 0.77
MDH1P40925 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
MDH1P40925 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
MDH1P40925 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MDH1P40925 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MDH1P40925 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MDH1P40925 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
MDH1P40925 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.87■□□□□ 0.77
MDH1P40925 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MDH1P40925 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.87■□□□□ 0.77
MDH1P40925 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MDH1P40925 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.87■□□□□ 0.77
MDH1P40925 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.87■□□□□ 0.77
MDH1P40925 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MDH1P40925 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MDH1P40925 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MDH1P40925 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
MDH1P40925 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MDH1P40925 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MDH1P40925 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
MDH1P40925 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MDH1P40925 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.87■□□□□ 0.77
MDH1P40925 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.86■□□□□ 0.77
MDH1P40925 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MDH1P40925 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MDH1P40925 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.86■□□□□ 0.77
MDH1P40925 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MDH1P40925 AL354751.1-201ENST00000412768 1863 ntBASIC19.86■□□□□ 0.77
MDH1P40925 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MDH1P40925 AC068880.1-201ENST00000507289 2297 ntBASIC19.86■□□□□ 0.77
MDH1P40925 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MDH1P40925 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
MDH1P40925 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
MDH1P40925 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.86■□□□□ 0.77
MDH1P40925 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.86■□□□□ 0.77
MDH1P40925 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MDH1P40925 DUX4L19-201ENST00000557448 1267 ntBASIC19.86■□□□□ 0.77
MDH1P40925 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.86■□□□□ 0.77
MDH1P40925 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
MDH1P40925 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
MDH1P40925 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
MDH1P40925 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.86■□□□□ 0.77
MDH1P40925 WIZP1-201ENST00000531444 2299 ntBASIC19.86■□□□□ 0.77
MDH1P40925 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MDH1P40925 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MDH1P40925 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms