Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC007322.4-201ENST00000509611 723 ntBASIC19.99■□□□□ 0.79
RPA3P35244 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.99■□□□□ 0.79
RPA3P35244 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.99■□□□□ 0.79
RPA3P35244 AL591742.1-201ENST00000604433 565 ntBASIC19.99■□□□□ 0.79
RPA3P35244 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPA3P35244 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPA3P35244 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPA3P35244 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RPA3P35244 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPA3P35244 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.99■□□□□ 0.79
RPA3P35244 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPA3P35244 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPA3P35244 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPA3P35244 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.98■□□□□ 0.79
RPA3P35244 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.98■□□□□ 0.79
RPA3P35244 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPA3P35244 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPA3P35244 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPA3P35244 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RPA3P35244 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPA3P35244 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPA3P35244 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
RPA3P35244 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RPA3P35244 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RPA3P35244 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPA3P35244 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPA3P35244 CNN2P6-201ENST00000439038 900 ntBASIC19.98■□□□□ 0.79
RPA3P35244 CDV3P1-201ENST00000471403 739 ntBASIC19.98■□□□□ 0.79
RPA3P35244 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPA3P35244 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.98■□□□□ 0.79
RPA3P35244 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPA3P35244 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.98■□□□□ 0.79
RPA3P35244 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPA3P35244 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.98■□□□□ 0.79
RPA3P35244 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.97■□□□□ 0.79
RPA3P35244 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.97■□□□□ 0.79
RPA3P35244 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPA3P35244 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPA3P35244 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPA3P35244 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPA3P35244 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RPA3P35244 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPA3P35244 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPA3P35244 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
RPA3P35244 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPA3P35244 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.97■□□□□ 0.79
RPA3P35244 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RPA3P35244 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPA3P35244 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPA3P35244 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPA3P35244 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.97■□□□□ 0.79
RPA3P35244 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.97■□□□□ 0.79
RPA3P35244 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPA3P35244 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPA3P35244 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPA3P35244 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.97■□□□□ 0.79
RPA3P35244 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.97■□□□□ 0.79
RPA3P35244 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.97■□□□□ 0.79
RPA3P35244 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RPA3P35244 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPA3P35244 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPA3P35244 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.96■□□□□ 0.79
RPA3P35244 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RPA3P35244 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.96■□□□□ 0.79
RPA3P35244 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RPA3P35244 AC007322.3-201ENST00000426526 701 ntBASIC19.96■□□□□ 0.79
RPA3P35244 CDCA4P2-201ENST00000441182 718 ntBASIC19.96■□□□□ 0.79
RPA3P35244 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPA3P35244 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.96■□□□□ 0.79
RPA3P35244 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.96■□□□□ 0.79
RPA3P35244 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPA3P35244 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPA3P35244 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPA3P35244 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPA3P35244 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPA3P35244 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.95■□□□□ 0.79
RPA3P35244 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RPA3P35244 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPA3P35244 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RPA3P35244 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
RPA3P35244 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPA3P35244 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPA3P35244 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPA3P35244 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPA3P35244 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPA3P35244 AC026185.1-201ENST00000445748 174 ntBASIC19.95■□□□□ 0.78
RPA3P35244 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.95■□□□□ 0.78
RPA3P35244 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.95■□□□□ 0.78
RPA3P35244 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPA3P35244 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.95■□□□□ 0.78
RPA3P35244 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.95■□□□□ 0.78
RPA3P35244 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPA3P35244 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPA3P35244 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPA3P35244 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPA3P35244 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPA3P35244 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPA3P35244 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.95■□□□□ 0.78
RPA3P35244 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.95■□□□□ 0.78
RPA3P35244 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms