Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSP1P33241 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSP1P33241 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSP1P33241 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSP1P33241 BICD1-207ENST00000551848 1962 ntBASIC19.87■□□□□ 0.77
LSP1P33241 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LSP1P33241 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LSP1P33241 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LSP1P33241 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSP1P33241 UNC93B8-201ENST00000511903 705 ntBASIC19.87■□□□□ 0.77
LSP1P33241 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.87■□□□□ 0.77
LSP1P33241 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LSP1P33241 AL354751.1-201ENST00000412768 1863 ntBASIC19.87■□□□□ 0.77
LSP1P33241 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
LSP1P33241 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LSP1P33241 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.87■□□□□ 0.77
LSP1P33241 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSP1P33241 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSP1P33241 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSP1P33241 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.87■□□□□ 0.77
LSP1P33241 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSP1P33241 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSP1P33241 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
LSP1P33241 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LSP1P33241 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LSP1P33241 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LSP1P33241 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LSP1P33241 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LSP1P33241 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LSP1P33241 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LSP1P33241 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LSP1P33241 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
LSP1P33241 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
LSP1P33241 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LSP1P33241 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
LSP1P33241 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.86■□□□□ 0.77
LSP1P33241 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LSP1P33241 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
LSP1P33241 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LSP1P33241 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LSP1P33241 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.86■□□□□ 0.77
LSP1P33241 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.86■□□□□ 0.77
LSP1P33241 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.86■□□□□ 0.77
LSP1P33241 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSP1P33241 AC116050.2-201ENST00000612102 1779 ntBASIC19.85■□□□□ 0.77
LSP1P33241 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSP1P33241 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.85■□□□□ 0.77
LSP1P33241 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LSP1P33241 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSP1P33241 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSP1P33241 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSP1P33241 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.85■□□□□ 0.77
LSP1P33241 WIZP1-201ENST00000531444 2299 ntBASIC19.85■□□□□ 0.77
LSP1P33241 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LSP1P33241 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.85■□□□□ 0.77
LSP1P33241 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSP1P33241 AL356441.2-201ENST00000443009 864 ntBASIC19.85■□□□□ 0.77
LSP1P33241 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.85■□□□□ 0.77
LSP1P33241 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LSP1P33241 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSP1P33241 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.85■□□□□ 0.77
LSP1P33241 AC136469.2-201ENST00000623944 1028 ntBASIC19.85■□□□□ 0.77
LSP1P33241 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LSP1P33241 AL161938.1-201ENST00000569833 2180 ntBASIC19.85■□□□□ 0.77
LSP1P33241 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSP1P33241 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.85■□□□□ 0.77
LSP1P33241 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSP1P33241 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.85■□□□□ 0.77
LSP1P33241 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.85■□□□□ 0.77
LSP1P33241 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSP1P33241 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSP1P33241 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LSP1P33241 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSP1P33241 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.85■□□□□ 0.77
LSP1P33241 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSP1P33241 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LSP1P33241 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSP1P33241 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSP1P33241 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.84■□□□□ 0.77
LSP1P33241 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSP1P33241 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LSP1P33241 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LSP1P33241 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LSP1P33241 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.84■□□□□ 0.77
LSP1P33241 AL138724.1-201ENST00000606771 1088 ntBASIC19.84■□□□□ 0.77
LSP1P33241 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSP1P33241 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSP1P33241 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSP1P33241 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSP1P33241 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
LSP1P33241 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSP1P33241 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSP1P33241 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSP1P33241 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSP1P33241 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LSP1P33241 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSP1P33241 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.83■□□□□ 0.77
LSP1P33241 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LSP1P33241 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LSP1P33241 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms