Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD74P04233 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD74P04233 RBM17P2-201ENST00000616397 1405 ntBASIC16.64■□□□□ 0.25
CD74P04233 PTBP1P-201ENST00000554374 1601 ntBASIC16.64■□□□□ 0.25
CD74P04233 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD74P04233 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CD74P04233 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.64■□□□□ 0.25
CD74P04233 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.64■□□□□ 0.25
CD74P04233 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.64■□□□□ 0.25
CD74P04233 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD74P04233 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.64■□□□□ 0.25
CD74P04233 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD74P04233 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
CD74P04233 AC105265.2-201ENST00000467189 838 ntBASIC16.64■□□□□ 0.25
CD74P04233 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.64■□□□□ 0.25
CD74P04233 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.64■□□□□ 0.25
CD74P04233 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.64■□□□□ 0.25
CD74P04233 AL354811.1-201ENST00000610286 706 ntBASIC16.64■□□□□ 0.25
CD74P04233 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD74P04233 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CD74P04233 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD74P04233 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CD74P04233 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD74P04233 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD74P04233 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD74P04233 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD74P04233 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD74P04233 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD74P04233 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD74P04233 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD74P04233 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD74P04233 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CD74P04233 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD74P04233 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD74P04233 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CD74P04233 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD74P04233 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CD74P04233 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CD74P04233 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD74P04233 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD74P04233 CCDC92B-201ENST00000575506 885 ntBASIC16.63■□□□□ 0.25
CD74P04233 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.63■□□□□ 0.25
CD74P04233 AL356652.1-201ENST00000615962 565 ntBASIC16.63■□□□□ 0.25
CD74P04233 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.63■□□□□ 0.25
CD74P04233 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD74P04233 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD74P04233 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD74P04233 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD74P04233 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CD74P04233 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD74P04233 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD74P04233 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD74P04233 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CD74P04233 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD74P04233 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.63■□□□□ 0.25
CD74P04233 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD74P04233 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CD74P04233 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.62■□□□□ 0.25
CD74P04233 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CD74P04233 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD74P04233 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD74P04233 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD74P04233 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD74P04233 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CD74P04233 AC097381.1-201ENST00000429019 1296 ntBASIC16.62■□□□□ 0.25
CD74P04233 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.62■□□□□ 0.25
CD74P04233 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.62■□□□□ 0.25
CD74P04233 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.62■□□□□ 0.25
CD74P04233 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.62■□□□□ 0.25
CD74P04233 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.62■□□□□ 0.25
CD74P04233 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD74P04233 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.62■□□□□ 0.25
CD74P04233 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CD74P04233 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.62■□□□□ 0.25
CD74P04233 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CD74P04233 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CD74P04233 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD74P04233 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.62■□□□□ 0.25
CD74P04233 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.62■□□□□ 0.25
CD74P04233 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD74P04233 KRT16P6-202ENST00000425692 1426 ntBASIC16.62■□□□□ 0.25
CD74P04233 KRT8P17-201ENST00000453110 1448 ntBASIC16.62■□□□□ 0.25
CD74P04233 AC087633.2-202ENST00000565166 1439 ntBASIC16.62■□□□□ 0.25
CD74P04233 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD74P04233 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.61■□□□□ 0.25
CD74P04233 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.61■□□□□ 0.25
CD74P04233 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD74P04233 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.61■□□□□ 0.25
CD74P04233 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.61■□□□□ 0.25
CD74P04233 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD74P04233 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD74P04233 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.61■□□□□ 0.25
CD74P04233 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.61■□□□□ 0.25
CD74P04233 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.61■□□□□ 0.25
CD74P04233 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.61■□□□□ 0.25
CD74P04233 KRT18P20-201ENST00000548986 1279 ntBASIC16.61■□□□□ 0.25
CD74P04233 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.61■□□□□ 0.25
CD74P04233 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.61■□□□□ 0.25
CD74P04233 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD74P04233 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms