Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.31■□□□□ 0.52
NKX2-2O95096 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.31■□□□□ 0.52
NKX2-2O95096 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.31■□□□□ 0.52
NKX2-2O95096 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.31■□□□□ 0.52
NKX2-2O95096 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.31■□□□□ 0.52
NKX2-2O95096 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NKX2-2O95096 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NKX2-2O95096 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NKX2-2O95096 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NKX2-2O95096 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NKX2-2O95096 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NKX2-2O95096 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.31■□□□□ 0.52
NKX2-2O95096 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NKX2-2O95096 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NKX2-2O95096 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NKX2-2O95096 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX2-2O95096 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.3■□□□□ 0.52
NKX2-2O95096 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NKX2-2O95096 TFP1-202ENST00000475455 1573 ntBASIC18.3■□□□□ 0.52
NKX2-2O95096 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.3■□□□□ 0.52
NKX2-2O95096 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX2-2O95096 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NKX2-2O95096 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NKX2-2O95096 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NKX2-2O95096 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.3■□□□□ 0.52
NKX2-2O95096 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX2-2O95096 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.3■□□□□ 0.52
NKX2-2O95096 SOX15-203ENST00000570788 1093 ntBASIC18.3■□□□□ 0.52
NKX2-2O95096 AC120498.8-201ENST00000614275 531 ntBASIC18.3■□□□□ 0.52
NKX2-2O95096 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.3■□□□□ 0.52
NKX2-2O95096 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX2-2O95096 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
NKX2-2O95096 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NKX2-2O95096 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NKX2-2O95096 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX2-2O95096 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.3■□□□□ 0.52
NKX2-2O95096 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX2-2O95096 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX2-2O95096 TREX1-205ENST00000625293 1783 ntBASIC18.3■□□□□ 0.52
NKX2-2O95096 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NKX2-2O95096 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NKX2-2O95096 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.29■□□□□ 0.52
NKX2-2O95096 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NKX2-2O95096 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX2-2O95096 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NKX2-2O95096 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NKX2-2O95096 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NKX2-2O95096 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
NKX2-2O95096 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.29■□□□□ 0.52
NKX2-2O95096 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX2-2O95096 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX2-2O95096 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX2-2O95096 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.29■□□□□ 0.52
NKX2-2O95096 AC124283.5-201ENST00000624661 1809 ntBASIC18.29■□□□□ 0.52
NKX2-2O95096 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX2-2O95096 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NKX2-2O95096 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX2-2O95096 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX2-2O95096 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX2-2O95096 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NKX2-2O95096 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NKX2-2O95096 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.29■□□□□ 0.52
NKX2-2O95096 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
NKX2-2O95096 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
NKX2-2O95096 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.29■□□□□ 0.52
NKX2-2O95096 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.29■□□□□ 0.52
NKX2-2O95096 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX2-2O95096 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NKX2-2O95096 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.29■□□□□ 0.52
NKX2-2O95096 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX2-2O95096 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NKX2-2O95096 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NKX2-2O95096 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.29■□□□□ 0.52
NKX2-2O95096 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.29■□□□□ 0.52
NKX2-2O95096 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NKX2-2O95096 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.29■□□□□ 0.52
NKX2-2O95096 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
NKX2-2O95096 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NKX2-2O95096 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
NKX2-2O95096 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NKX2-2O95096 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NKX2-2O95096 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.28■□□□□ 0.52
NKX2-2O95096 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
NKX2-2O95096 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.28■□□□□ 0.52
NKX2-2O95096 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.28■□□□□ 0.52
NKX2-2O95096 UNC93B5-201ENST00000530315 699 ntBASIC18.28■□□□□ 0.52
NKX2-2O95096 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NKX2-2O95096 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.28■□□□□ 0.52
NKX2-2O95096 AC008687.6-201ENST00000596318 630 ntBASIC18.28■□□□□ 0.52
NKX2-2O95096 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.28■□□□□ 0.52
NKX2-2O95096 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.28■□□□□ 0.52
NKX2-2O95096 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.28■□□□□ 0.52
NKX2-2O95096 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
NKX2-2O95096 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NKX2-2O95096 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NKX2-2O95096 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.28■□□□□ 0.52
NKX2-2O95096 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.28■□□□□ 0.52
NKX2-2O95096 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NKX2-2O95096 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NKX2-2O95096 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms