Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.27■□□□□ 0.36
UPK1BO75841 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
UPK1BO75841 AC009053.2-201ENST00000563701 2365 ntBASIC17.27■□□□□ 0.36
UPK1BO75841 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UPK1BO75841 PVT1_1.1-201ENST00000615125 194 ntBASIC17.27■□□□□ 0.36
UPK1BO75841 AL161938.1-201ENST00000569833 2180 ntBASIC17.27■□□□□ 0.36
UPK1BO75841 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UPK1BO75841 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
UPK1BO75841 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UPK1BO75841 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
UPK1BO75841 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
UPK1BO75841 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
UPK1BO75841 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UPK1BO75841 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UPK1BO75841 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UPK1BO75841 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.35
UPK1BO75841 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
UPK1BO75841 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPK1BO75841 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPK1BO75841 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.26■□□□□ 0.35
UPK1BO75841 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPK1BO75841 AL031598.1-201ENST00000561511 1773 ntBASIC17.26■□□□□ 0.35
UPK1BO75841 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.26■□□□□ 0.35
UPK1BO75841 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
UPK1BO75841 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.26■□□□□ 0.35
UPK1BO75841 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UPK1BO75841 AC009237.14-201ENST00000609975 1594 ntBASIC17.26■□□□□ 0.35
UPK1BO75841 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPK1BO75841 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPK1BO75841 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.26■□□□□ 0.35
UPK1BO75841 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPK1BO75841 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPK1BO75841 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
UPK1BO75841 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
UPK1BO75841 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPK1BO75841 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.25■□□□□ 0.35
UPK1BO75841 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UPK1BO75841 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPK1BO75841 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPK1BO75841 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.25■□□□□ 0.35
UPK1BO75841 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.25■□□□□ 0.35
UPK1BO75841 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPK1BO75841 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.25■□□□□ 0.35
UPK1BO75841 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
UPK1BO75841 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPK1BO75841 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPK1BO75841 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
UPK1BO75841 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.25■□□□□ 0.35
UPK1BO75841 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPK1BO75841 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPK1BO75841 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPK1BO75841 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
UPK1BO75841 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UPK1BO75841 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UPK1BO75841 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPK1BO75841 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.25■□□□□ 0.35
UPK1BO75841 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UPK1BO75841 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPK1BO75841 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPK1BO75841 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPK1BO75841 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPK1BO75841 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPK1BO75841 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.24■□□□□ 0.35
UPK1BO75841 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPK1BO75841 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UPK1BO75841 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.24■□□□□ 0.35
UPK1BO75841 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
UPK1BO75841 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPK1BO75841 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
UPK1BO75841 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPK1BO75841 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPK1BO75841 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UPK1BO75841 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UPK1BO75841 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UPK1BO75841 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UPK1BO75841 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPK1BO75841 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPK1BO75841 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UPK1BO75841 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
UPK1BO75841 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
UPK1BO75841 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.24■□□□□ 0.35
UPK1BO75841 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
UPK1BO75841 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
UPK1BO75841 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPK1BO75841 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UPK1BO75841 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPK1BO75841 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.23■□□□□ 0.35
UPK1BO75841 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.23■□□□□ 0.35
UPK1BO75841 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.23■□□□□ 0.35
UPK1BO75841 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
UPK1BO75841 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UPK1BO75841 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPK1BO75841 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
UPK1BO75841 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.23■□□□□ 0.35
UPK1BO75841 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.23■□□□□ 0.35
UPK1BO75841 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
UPK1BO75841 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPK1BO75841 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPK1BO75841 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPK1BO75841 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms