Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDHR4A6H8M9 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.21■□□□□ 0.51
CDHR4A6H8M9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.21■□□□□ 0.51
CDHR4A6H8M9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.21■□□□□ 0.51
CDHR4A6H8M9 AC092118.2-201ENST00000613495 667 ntBASIC18.21■□□□□ 0.51
CDHR4A6H8M9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDHR4A6H8M9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDHR4A6H8M9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDHR4A6H8M9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.21■□□□□ 0.51
CDHR4A6H8M9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDHR4A6H8M9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDHR4A6H8M9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 NCF1B-203ENST00000435988 1254 ntBASIC18.2■□□□□ 0.5
CDHR4A6H8M9 GUSBP6-202ENST00000438529 1198 ntBASIC18.2■□□□□ 0.5
CDHR4A6H8M9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDHR4A6H8M9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.19■□□□□ 0.5
CDHR4A6H8M9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.19■□□□□ 0.5
CDHR4A6H8M9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 DUSP5P2-201ENST00000426873 1033 ntBASIC18.18■□□□□ 0.5
CDHR4A6H8M9 TSPY6P-201ENST00000448518 926 ntBASIC18.18■□□□□ 0.5
CDHR4A6H8M9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.18■□□□□ 0.5
CDHR4A6H8M9 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.18■□□□□ 0.5
CDHR4A6H8M9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.17■□□□□ 0.5
CDHR4A6H8M9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDHR4A6H8M9 RNF165-205ENST00000588679 2904 ntBASIC18.17■□□□□ 0.5
CDHR4A6H8M9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDHR4A6H8M9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDHR4A6H8M9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDHR4A6H8M9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.17■□□□□ 0.5
CDHR4A6H8M9 SLC29A4P1-201ENST00000398760 971 ntBASIC18.17■□□□□ 0.5
CDHR4A6H8M9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.17■□□□□ 0.5
CDHR4A6H8M9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.17■□□□□ 0.5
CDHR4A6H8M9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms