Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHD8Q9HCK8 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHD8Q9HCK8 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHD8Q9HCK8 AF287957.1-201ENST00000607368 1595 ntBASIC5.9□□□□□ -1.46
CHD8Q9HCK8 HDAC1P2-201ENST00000453661 1398 ntBASIC5.9□□□□□ -1.46
CHD8Q9HCK8 GCNT7-202ENST00000617620 1355 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CHD8Q9HCK8 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 SNORA64.1-201ENST00000362600 132 ntBASIC5.9□□□□□ -1.47
CHD8Q9HCK8 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 RN7SL738P-201ENST00000470264 297 ntBASIC5.9□□□□□ -1.47
CHD8Q9HCK8 AC110775.1-201ENST00000513721 462 ntBASIC5.9□□□□□ -1.47
CHD8Q9HCK8 SETP21-201ENST00000514799 892 ntBASIC5.9□□□□□ -1.47
CHD8Q9HCK8 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 GLUD1P2-201ENST00000583339 201 ntBASIC5.9□□□□□ -1.47
CHD8Q9HCK8 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CHD8Q9HCK8 IST1-208ENST00000535424 4082 ntTSL 5 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 SUN3-202ENST00000395572 1348 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 RN7SKP213-201ENST00000410746 298 ntBASIC5.89□□□□□ -1.47
CHD8Q9HCK8 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 TPT1P13-201ENST00000449760 499 ntBASIC5.89□□□□□ -1.47
CHD8Q9HCK8 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 FKBP1AP1-201ENST00000594588 318 ntBASIC5.89□□□□□ -1.47
CHD8Q9HCK8 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.89□□□□□ -1.47
CHD8Q9HCK8 HLF-210ENST00000575345 3589 ntTSL 2 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 AL603650.1-201ENST00000412680 240 ntBASIC5.89□□□□□ -1.47
CHD8Q9HCK8 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 RPS7P8-201ENST00000418311 581 ntBASIC5.89□□□□□ -1.47
CHD8Q9HCK8 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 AC023245.1-201ENST00000468501 517 ntBASIC5.89□□□□□ -1.47
CHD8Q9HCK8 AC022034.3-201ENST00000471393 478 ntBASIC5.89□□□□□ -1.47
CHD8Q9HCK8 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 OR4A1P-201ENST00000532342 920 ntBASIC5.89□□□□□ -1.47
CHD8Q9HCK8 OR4A21P-201ENST00000532759 944 ntBASIC5.89□□□□□ -1.47
CHD8Q9HCK8 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 AP001823.1-201ENST00000604056 1003 ntBASIC5.89□□□□□ -1.47
CHD8Q9HCK8 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 FADS1-211ENST00000536991 2701 ntTSL 2 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 AC104825.2-201ENST00000505448 3249 ntBASIC5.89□□□□□ -1.47
CHD8Q9HCK8 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.89□□□□□ -1.47
CHD8Q9HCK8 AL136981.1-203ENST00000451452 3844 ntBASIC5.89□□□□□ -1.47
CHD8Q9HCK8 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHD8Q9HCK8 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CHD8Q9HCK8 AC119674.1-204ENST00000641348 1343 ntBASIC5.88□□□□□ -1.47
CHD8Q9HCK8 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHD8Q9HCK8 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC5.88□□□□□ -1.47
CHD8Q9HCK8 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC5.88□□□□□ -1.47
CHD8Q9HCK8 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHD8Q9HCK8 AC125238.2-201ENST00000430003 1440 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms