RNA–Protein interactions for RNA: ENST00000396208.3

CCP110-202, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCP110, Length 5,151 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-202ENST00000396208 DCAF8L2P0C7V8 631 aa13.68□□□□□ -0.22
CCP110-202ENST00000396208 NISCHQ9Y2I1 1504 aa13.46□□□□□ -0.26
CCP110-202ENST00000396208 FAM9AQ8IZU1 332 aaPredicted RBP12.65□□□□□ -0.38
CCP110-202ENST00000396208 SUPT5HO00267 1087 aaKnown RBP12.2□□□□□ -0.46
CCP110-202ENST00000396208 SHROOM4Q9ULL8 1493 aa12.14□□□□□ -0.47
CCP110-202ENST00000396208 ABCC9O60706 1549 aa12.05□□□□□ -0.48
CCP110-202ENST00000396208 APLP2Q06481 763 aa12□□□□□ -0.49
CCP110-202ENST00000396208 PABPN1Q86U42 306 aaKnown RBP eCLIP11.73□□□□□ -0.53
CCP110-202ENST00000396208 ATP1B4Q9UN42 357 aaPredicted RBP11.62□□□□□ -0.55
CCP110-202ENST00000396208 MYT1LQ9UL68 1186 aa11.58□□□□□ -0.55
CCP110-202ENST00000396208 TRIM41Q8WV44 630 aa11.56□□□□□ -0.56
CCP110-202ENST00000396208 EHMT2Q96KQ7 1210 aa11.52□□□□□ -0.56
CCP110-202ENST00000396208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.51□□□□□ -0.57
CCP110-202ENST00000396208 HNRNPUL2Q1KMD3 747 aaKnown RBP11.51□□□□□ -0.57
CCP110-202ENST00000396208 CCDC180Q9P1Z9 1646 aa11.49□□□□□ -0.57
CCP110-202ENST00000396208 UBTFP17480 764 aaKnown RBP11.49□□□□□ -0.57
CCP110-202ENST00000396208 RB1CC1Q8TDY2 1594 aa11.48□□□□□ -0.57
CCP110-202ENST00000396208 RANGAP1P46060 587 aaPredicted RBP11.43□□□□□ -0.58
CCP110-202ENST00000396208 FBLN2P98095 1184 aa11.39□□□□□ -0.59
CCP110-202ENST00000396208 TTBK1Q5TCY1 1321 aaPredicted RBP11.37□□□□□ -0.59
CCP110-202ENST00000396208 NPM1P06748 294 aaKnown RBP eCLIP11.37□□□□□ -0.59
CCP110-202ENST00000396208 NACADO15069 1562 aa11.29□□□□□ -0.6
CCP110-202ENST00000396208 SCRIBQ14160 1630 aa11.26□□□□□ -0.61
CCP110-202ENST00000396208 ESF1Q9H501 851 aaKnown RBP11.2□□□□□ -0.62
CCP110-202ENST00000396208 ERCC6Q03468 1493 aa11.16□□□□□ -0.62
CCP110-202ENST00000396208 CDK11AQ9UQ88 783 aaPredicted RBP11.12□□□□□ -0.63
CCP110-202ENST00000396208 CHMP7Q8WUX9 453 aaPredicted RBP11.06□□□□□ -0.64
CCP110-202ENST00000396208 ZCCHC6Q5VYS8 1495 aaKnown RBP11.04□□□□□ -0.64
CCP110-202ENST00000396208 CHIC1Q5VXU3 224 aa11□□□□□ -0.65
CCP110-202ENST00000396208 BCANQ96GW7 911 aa10.94□□□□□ -0.66
CCP110-202ENST00000396208 BAZ1BQ9UIG0 1483 aaKnown RBP10.93□□□□□ -0.66
CCP110-202ENST00000396208 TRHP20396 242 aaPredicted RBP10.91□□□□□ -0.66
CCP110-202ENST00000396208 PELP1Q8IZL8 1130 aaKnown RBP10.9□□□□□ -0.66
CCP110-202ENST00000396208 PDS5BQ9NTI5 1447 aa10.88□□□□□ -0.67
CCP110-202ENST00000396208 STAG3Q9UJ98 1225 aa10.86□□□□□ -0.67
CCP110-202ENST00000396208 DCAF1Q9Y4B6 1507 aa10.84□□□□□ -0.67
CCP110-202ENST00000396208 ITGAEP38570 1179 aa10.82□□□□□ -0.68
CCP110-202ENST00000396208 CECR2Q9BXF3 1484 aa10.81□□□□□ -0.68
CCP110-202ENST00000396208 SLC4A1APQ9BWU0 796 aaKnown RBP10.8□□□□□ -0.68
CCP110-202ENST00000396208 FAM50AQ14320 339 aaKnown RBP10.78□□□□□ -0.68
CCP110-202ENST00000396208 CCER1Q8TC90 406 aaPredicted RBP10.78□□□□□ -0.68
CCP110-202ENST00000396208 ZEB1P37275 1124 aaPredicted RBP10.77□□□□□ -0.68
CCP110-202ENST00000396208 TRIM52Q96A61 297 aa10.77□□□□□ -0.69
CCP110-202ENST00000396208 MYO15BQ96JP2 1530 aa10.77□□□□□ -0.69
CCP110-202ENST00000396208 PCGF6Q9BYE7 350 aa10.76□□□□□ -0.69
CCP110-202ENST00000396208 SMARCA2P51531 1590 aa10.76□□□□□ -0.69
CCP110-202ENST00000396208 BAZ1AQ9NRL2 1556 aaPredicted RBP10.76□□□□□ -0.69
CCP110-202ENST00000396208 CSRNP3Q8WYN3 585 aa10.75□□□□□ -0.69
CCP110-202ENST00000396208 ZNF777Q9ULD5 760 aaPredicted RBP10.74□□□□□ -0.69
CCP110-202ENST00000396208 ARID4BQ4LE39 1312 aaPredicted RBP10.74□□□□□ -0.69
CCP110-202ENST00000396208 AEBP2Q6ZN18 517 aaPredicted RBP10.74□□□□□ -0.69
CCP110-202ENST00000396208 PLPPR3Q6T4P5 718 aa10.72□□□□□ -0.69
CCP110-202ENST00000396208 PLEKHD1A6NEE1 506 aa10.71□□□□□ -0.7
CCP110-202ENST00000396208 P3H3Q8IVL6 736 aa10.7□□□□□ -0.7
CCP110-202ENST00000396208 TSPY4P0CV99 314 aa10.69□□□□□ -0.7
CCP110-202ENST00000396208 TSPY10P0CW01 314 aa10.69□□□□□ -0.7
CCP110-202ENST00000396208 ARID3CA6NKF2 412 aa10.68□□□□□ -0.7
CCP110-202ENST00000396208 POLR3GLQ9BT43 218 aa10.66□□□□□ -0.7
CCP110-202ENST00000396208 ACIN1Q9UKV3 1341 aaKnown RBP10.65□□□□□ -0.7
CCP110-202ENST00000396208 OSCARQ8IYS5 282 aa10.64□□□□□ -0.71
CCP110-202ENST00000396208 NEFMP07197 916 aa10.63□□□□□ -0.71
CCP110-202ENST00000396208 KCNH8Q96L42 1107 aa10.61□□□□□ -0.71
CCP110-202ENST00000396208 CHGAP10645 457 aaKnown RBP10.61□□□□□ -0.71
CCP110-202ENST00000396208 KIF27Q86VH2 1401 aa10.6□□□□□ -0.71
CCP110-202ENST00000396208 CARMIL2Q6F5E8 1435 aa10.6□□□□□ -0.71
CCP110-202ENST00000396208 WRNQ14191 1432 aaPredicted RBP eCLIP10.59□□□□□ -0.71
CCP110-202ENST00000396208 PPP1R15AO75807 674 aaPredicted RBP10.58□□□□□ -0.72
CCP110-202ENST00000396208 HDGFP51858 240 aaKnown RBP10.57□□□□□ -0.72
CCP110-202ENST00000396208 C14orf37Q86TY3 774 aa10.57□□□□□ -0.72
CCP110-202ENST00000396208 RSF1Q96T23 1441 aaPredicted RBP10.56□□□□□ -0.72
CCP110-202ENST00000396208 ABCC8Q09428 1581 aa10.56□□□□□ -0.72
CCP110-202ENST00000396208 EEA1Q15075 1411 aa10.55□□□□□ -0.72
CCP110-202ENST00000396208 CADPSQ9ULU8 1353 aa10.54□□□□□ -0.72
CCP110-202ENST00000396208 MTUS2Q5JR59 1369 aa10.53□□□□□ -0.72
CCP110-202ENST00000396208 CEP164Q9UPV0 1460 aa10.53□□□□□ -0.72
CCP110-202ENST00000396208 HAP1P54257 671 aaPredicted RBP10.5□□□□□ -0.73
CCP110-202ENST00000396208 PPARGC1BQ86YN6 1023 aaKnown RBP10.48□□□□□ -0.73
CCP110-202ENST00000396208 TRIM26Q12899 539 aaPredicted RBP10.47□□□□□ -0.73
CCP110-202ENST00000396208 ZNF326Q5BKZ1 582 aaKnown RBP10.46□□□□□ -0.73
CCP110-202ENST00000396208 SOGA1O94964 1423 aa10.46□□□□□ -0.74
CCP110-202ENST00000396208 CLIP1P30622 1438 aa10.45□□□□□ -0.74
CCP110-202ENST00000396208 NEFLP07196 543 aa10.45□□□□□ -0.74
CCP110-202ENST00000396208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.45□□□□□ -0.74
CCP110-202ENST00000396208 SCAF1Q9H7N4 1312 aaKnown RBP10.44□□□□□ -0.74
CCP110-202ENST00000396208 SLC24A1O60721 1099 aa10.43□□□□□ -0.74
CCP110-202ENST00000396208 NPM2Q86SE8 214 aaKnown RBP10.43□□□□□ -0.74
CCP110-202ENST00000396208 CFDP1Q9UEE9 299 aaPredicted RBP10.42□□□□□ -0.74
CCP110-202ENST00000396208 CYB5RLQ6IPT4 315 aa10.41□□□□□ -0.74
CCP110-202ENST00000396208 KANK1Q14678 1352 aa10.41□□□□□ -0.74
CCP110-202ENST00000396208 CUX2O14529 1486 aa10.4□□□□□ -0.74
CCP110-202ENST00000396208 ATAD2BQ9ULI0 1458 aa10.4□□□□□ -0.75
CCP110-202ENST00000396208 EIF4G1Q04637 1599 aaKnown RBP10.38□□□□□ -0.75
CCP110-202ENST00000396208 LOC105371045A0A1W2PR82 267 aa10.37□□□□□ -0.75
CCP110-202ENST00000396208 CARMIL1Q5VZK9 1371 aa10.37□□□□□ -0.75
CCP110-202ENST00000396208 ZBTB47Q9UFB7 747 aaPredicted RBP10.37□□□□□ -0.75
CCP110-202ENST00000396208 EFCAB2Q5VUJ9 269 aa10.37□□□□□ -0.75
CCP110-202ENST00000396208 CENPBP07199 599 aaPredicted RBP10.36□□□□□ -0.75
CCP110-202ENST00000396208 FANCD2Q9BXW9 1451 aa10.35□□□□□ -0.75
CCP110-202ENST00000396208 FHAD1B1AJZ9 1412 aa10.33□□□□□ -0.76
CCP110-202ENST00000396208 NCAPD3P42695 1498 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms