RNA–Protein interactions for RNA: ENST00000256062.9

TMTC1-201, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene TMTC1, Length 8,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-201ENST00000256062 DCAF8L2P0C7V8 631 aa15.4■□□□□ 0.06
TMTC1-201ENST00000256062 EHMT2Q96KQ7 1210 aa14.47□□□□□ -0.09
TMTC1-201ENST00000256062 SUPT5HO00267 1087 aaKnown RBP14.41□□□□□ -0.1
TMTC1-201ENST00000256062 SHROOM4Q9ULL8 1493 aa14.05□□□□□ -0.16
TMTC1-201ENST00000256062 TTBK1Q5TCY1 1321 aaPredicted RBP13.94□□□□□ -0.18
TMTC1-201ENST00000256062 PELP1Q8IZL8 1130 aaKnown RBP13.8□□□□□ -0.2
TMTC1-201ENST00000256062 APLP2Q06481 763 aa13.77□□□□□ -0.2
TMTC1-201ENST00000256062 FAM9AQ8IZU1 332 aaPredicted RBP13.77□□□□□ -0.2
TMTC1-201ENST00000256062 RANGAP1P46060 587 aaPredicted RBP13.74□□□□□ -0.21
TMTC1-201ENST00000256062 ATP1B4Q9UN42 357 aaPredicted RBP13.55□□□□□ -0.24
TMTC1-201ENST00000256062 PCGF6Q9BYE7 350 aa13.54□□□□□ -0.24
TMTC1-201ENST00000256062 ERICH6Q7L0X2 663 aa13.49□□□□□ -0.25
TMTC1-201ENST00000256062 YTHDC1Q96MU7 727 aaKnown RBP13.3□□□□□ -0.28
TMTC1-201ENST00000256062 CCER1Q8TC90 406 aaPredicted RBP13.26□□□□□ -0.29
TMTC1-201ENST00000256062 NISCHQ9Y2I1 1504 aa13.22□□□□□ -0.29
TMTC1-201ENST00000256062 PPARGC1BQ86YN6 1023 aaKnown RBP13.2□□□□□ -0.3
TMTC1-201ENST00000256062 CENPBP07199 599 aaPredicted RBP13.19□□□□□ -0.3
TMTC1-201ENST00000256062 UBTFP17480 764 aaKnown RBP13.17□□□□□ -0.3
TMTC1-201ENST00000256062 TRIM41Q8WV44 630 aa13.14□□□□□ -0.31
TMTC1-201ENST00000256062 MYT1LQ9UL68 1186 aa13.12□□□□□ -0.31
TMTC1-201ENST00000256062 CNGB1Q14028 1251 aaPredicted RBP13.12□□□□□ -0.31
TMTC1-201ENST00000256062 POLR3GLQ9BT43 218 aa13.11□□□□□ -0.31
TMTC1-201ENST00000256062 MYT1Q01538 1121 aa13.11□□□□□ -0.31
TMTC1-201ENST00000256062 NEFLP07196 543 aa13.1□□□□□ -0.31
TMTC1-201ENST00000256062 CHIC1Q5VXU3 224 aa13.1□□□□□ -0.31
TMTC1-201ENST00000256062 ITGAEP38570 1179 aa13.01□□□□□ -0.33
TMTC1-201ENST00000256062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13□□□□□ -0.33
TMTC1-201ENST00000256062 HNRNPUL2Q1KMD3 747 aaKnown RBP13□□□□□ -0.33
TMTC1-201ENST00000256062 ZEB1P37275 1124 aaPredicted RBP12.91□□□□□ -0.34
TMTC1-201ENST00000256062 SLC4A1APQ9BWU0 796 aaKnown RBP12.89□□□□□ -0.35
TMTC1-201ENST00000256062 DAXXQ9UER7 740 aaPredicted RBP12.87□□□□□ -0.35
TMTC1-201ENST00000256062 CLSPNQ9HAW4 1339 aa12.65□□□□□ -0.38
TMTC1-201ENST00000256062 BCL11AQ9H165 835 aa12.64□□□□□ -0.39
TMTC1-201ENST00000256062 LOC105371045A0A1W2PR82 267 aa12.58□□□□□ -0.4
TMTC1-201ENST00000256062 ZNF316A6NFI3 1004 aaPredicted RBP12.57□□□□□ -0.4
TMTC1-201ENST00000256062 HRCP23327 699 aa12.56□□□□□ -0.4
TMTC1-201ENST00000256062 TRIM26Q12899 539 aaPredicted RBP12.53□□□□□ -0.4
TMTC1-201ENST00000256062 SLC24A1O60721 1099 aa12.53□□□□□ -0.4
TMTC1-201ENST00000256062 ZNF326Q5BKZ1 582 aaKnown RBP12.51□□□□□ -0.41
TMTC1-201ENST00000256062 BCANQ96GW7 911 aa12.51□□□□□ -0.41
TMTC1-201ENST00000256062 TRIM52Q96A61 297 aa12.49□□□□□ -0.41
TMTC1-201ENST00000256062 FAM50AQ14320 339 aaKnown RBP12.49□□□□□ -0.41
TMTC1-201ENST00000256062 RTL5Q5HYW3 569 aaPredicted RBP12.47□□□□□ -0.41
TMTC1-201ENST00000256062 NEUROD1Q13562 356 aa12.46□□□□□ -0.42
TMTC1-201ENST00000256062 ARID3CA6NKF2 412 aa12.38□□□□□ -0.43
TMTC1-201ENST00000256062 FBLN2P98095 1184 aa12.38□□□□□ -0.43
TMTC1-201ENST00000256062 PLPPR3Q6T4P5 718 aa12.35□□□□□ -0.43
TMTC1-201ENST00000256062 ZBTB47Q9UFB7 747 aaPredicted RBP12.33□□□□□ -0.44
TMTC1-201ENST00000256062 DIEXFQ68CQ4 756 aaKnown RBP12.3□□□□□ -0.44
TMTC1-201ENST00000256062 CANXP27824 592 aaKnown RBP12.28□□□□□ -0.44
TMTC1-201ENST00000256062 PABPN1Q86U42 306 aaKnown RBP eCLIP12.27□□□□□ -0.44
TMTC1-201ENST00000256062 P3H3Q8IVL6 736 aa12.2□□□□□ -0.46
TMTC1-201ENST00000256062 NPM2Q86SE8 214 aaKnown RBP12.17□□□□□ -0.46
TMTC1-201ENST00000256062 ZNF777Q9ULD5 760 aaPredicted RBP12.17□□□□□ -0.46
TMTC1-201ENST00000256062 ANP32CO43423 234 aa12.16□□□□□ -0.46
TMTC1-201ENST00000256062 GTF3C3Q9Y5Q9 886 aa12.14□□□□□ -0.47
TMTC1-201ENST00000256062 NEFMP07197 916 aa12.13□□□□□ -0.47
TMTC1-201ENST00000256062 CDK11AQ9UQ88 783 aaPredicted RBP12.12□□□□□ -0.47
TMTC1-201ENST00000256062 CHGAP10645 457 aaKnown RBP12.11□□□□□ -0.47
TMTC1-201ENST00000256062 PLEKHG5O94827 1062 aa12.08□□□□□ -0.48
TMTC1-201ENST00000256062 SENP3Q9H4L4 574 aaPredicted RBP12.07□□□□□ -0.48
TMTC1-201ENST00000256062 A0A0G2JS52 829 aa12.06□□□□□ -0.48
TMTC1-201ENST00000256062 ESF1Q9H501 851 aaKnown RBP12.05□□□□□ -0.48
TMTC1-201ENST00000256062 SALL2Q9Y467 1007 aaPredicted RBP12.04□□□□□ -0.48
TMTC1-201ENST00000256062 STAG3Q9UJ98 1225 aa12.03□□□□□ -0.48
TMTC1-201ENST00000256062 SCAF1Q9H7N4 1312 aaKnown RBP12.02□□□□□ -0.49
TMTC1-201ENST00000256062 CCDC180Q9P1Z9 1646 aa12.01□□□□□ -0.49
TMTC1-201ENST00000256062 ARXQ96QS3 562 aa11.99□□□□□ -0.49
TMTC1-201ENST00000256062 EIF5BO60841 1220 aaKnown RBP11.98□□□□□ -0.49
TMTC1-201ENST00000256062 HSP90AA1P07900 732 aaKnown RBP11.97□□□□□ -0.49
TMTC1-201ENST00000256062 ZBTB7CA1YPR0 619 aa11.95□□□□□ -0.5
TMTC1-201ENST00000256062 ANP32AP39687 249 aaKnown RBP11.95□□□□□ -0.5
TMTC1-201ENST00000256062 ABCC9O60706 1549 aa11.93□□□□□ -0.5
TMTC1-201ENST00000256062 FAM9BQ8IZU0 186 aa11.91□□□□□ -0.5
TMTC1-201ENST00000256062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.91□□□□□ -0.5
TMTC1-201ENST00000256062 FKBP8Q14318 412 aa11.87□□□□□ -0.51
TMTC1-201ENST00000256062 CHIC2Q9UKJ5 165 aa11.85□□□□□ -0.51
TMTC1-201ENST00000256062 ANP32BQ92688 251 aaKnown RBP11.85□□□□□ -0.51
TMTC1-201ENST00000256062 HNRNPUQ00839 825 aaKnown RBP eCLIP11.84□□□□□ -0.51
TMTC1-201ENST00000256062 SENP3-EIF4A1A0A087X0R7 540 aa11.83□□□□□ -0.52
TMTC1-201ENST00000256062 C14orf37Q86TY3 774 aa11.83□□□□□ -0.52
TMTC1-201ENST00000256062 KDM2AQ9Y2K7 1162 aa11.81□□□□□ -0.52
TMTC1-201ENST00000256062 NBR1Q14596 966 aa11.81□□□□□ -0.52
TMTC1-201ENST00000256062 DDX10Q13206 875 aaKnown RBP11.8□□□□□ -0.52
TMTC1-201ENST00000256062 NPM1P06748 294 aaKnown RBP eCLIP11.8□□□□□ -0.52
TMTC1-201ENST00000256062 TULP1O00294 542 aaPredicted RBP11.8□□□□□ -0.52
TMTC1-201ENST00000256062 IRX6P78412 446 aaPredicted RBP11.79□□□□□ -0.52
TMTC1-201ENST00000256062 UPF2Q9HAU5 1272 aaKnown RBP11.78□□□□□ -0.52
TMTC1-201ENST00000256062 TPRNQ4KMQ1 711 aa11.76□□□□□ -0.53
TMTC1-201ENST00000256062 HIRIP3Q9BW71 556 aaPredicted RBP11.76□□□□□ -0.53
TMTC1-201ENST00000256062 ACIN1Q9UKV3 1341 aaKnown RBP11.76□□□□□ -0.53
TMTC1-201ENST00000256062 TONSLQ96HA7 1378 aa11.75□□□□□ -0.53
TMTC1-201ENST00000256062 TAOK2Q9UL54 1235 aa11.72□□□□□ -0.53
TMTC1-201ENST00000256062 CSRNP3Q8WYN3 585 aa11.72□□□□□ -0.53
TMTC1-201ENST00000256062 CDK11BP21127 795 aaKnown RBP11.71□□□□□ -0.53
TMTC1-201ENST00000256062 WDR43Q15061 677 aaKnown RBP eCLIP11.71□□□□□ -0.53
TMTC1-201ENST00000256062 CCDC136Q96JN2 1154 aa11.71□□□□□ -0.53
TMTC1-201ENST00000256062 TMC1Q8TDI8 760 aa11.71□□□□□ -0.54
TMTC1-201ENST00000256062 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.68□□□□□ -0.54
TMTC1-201ENST00000256062 HAP1P54257 671 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms