RNA–Protein interactions for RNA: ENST00000423879.5

AL359853.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL359853.3, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL359853.3-201ENST00000423879 AEBP2Q6ZN18 517 aaPredicted RBP17.25■□□□□ 0.35
AL359853.3-201ENST00000423879 CHIC1Q5VXU3 224 aa17.11■□□□□ 0.33
AL359853.3-201ENST00000423879 PHF23Q9BUL5 403 aaPredicted RBP15.01□□□□□ -0.01
AL359853.3-201ENST00000423879 SENP3Q9H4L4 574 aaPredicted RBP14.71□□□□□ -0.05
AL359853.3-201ENST00000423879 PLPPR3Q6T4P5 718 aa14.02□□□□□ -0.17
AL359853.3-201ENST00000423879 FOXD1Q16676 465 aa13.55□□□□□ -0.24
AL359853.3-201ENST00000423879 NISCHQ9Y2I1 1504 aa13.47□□□□□ -0.25
AL359853.3-201ENST00000423879 ADRA2BP18089 450 aa13.16□□□□□ -0.3
AL359853.3-201ENST00000423879 PPP6R1Q9UPN7 881 aa13.16□□□□□ -0.3
AL359853.3-201ENST00000423879 PIAS4Q8N2W9 510 aaPredicted RBP12.84□□□□□ -0.35
AL359853.3-201ENST00000423879 ABCC9O60706 1549 aa12.56□□□□□ -0.4
AL359853.3-201ENST00000423879 MSH5O43196 834 aa12.51□□□□□ -0.41
AL359853.3-201ENST00000423879 PPP4R3CPQ6ZMV5 832 aa12.33□□□□□ -0.44
AL359853.3-201ENST00000423879 CCDC180Q9P1Z9 1646 aa12.26□□□□□ -0.45
AL359853.3-201ENST00000423879 KCNA4P22459 653 aa12.23□□□□□ -0.45
AL359853.3-201ENST00000423879 SCAF1Q9H7N4 1312 aaKnown RBP12.18□□□□□ -0.46
AL359853.3-201ENST00000423879 NCBP3Q53F19 620 aaKnown RBP12.14□□□□□ -0.47
AL359853.3-201ENST00000423879 CNKSR2Q8WXI2 1034 aa11.99□□□□□ -0.49
AL359853.3-201ENST00000423879 DNAJC5BQ9UF47 199 aa11.97□□□□□ -0.49
AL359853.3-201ENST00000423879 NPM3O75607 178 aaKnown RBP11.88□□□□□ -0.51
AL359853.3-201ENST00000423879 MAPK8IP2Q13387 824 aaPredicted RBP11.85□□□□□ -0.51
AL359853.3-201ENST00000423879 RB1CC1Q8TDY2 1594 aa11.79□□□□□ -0.52
AL359853.3-201ENST00000423879 DMRT2Q9Y5R5 561 aa11.76□□□□□ -0.53
AL359853.3-201ENST00000423879 SLC4A1APQ9BWU0 796 aaKnown RBP11.72□□□□□ -0.53
AL359853.3-201ENST00000423879 RNF216Q9NWF9 866 aaPredicted RBP11.71□□□□□ -0.53
AL359853.3-201ENST00000423879 UNC13AQ9UPW8 1703 aa11.7□□□□□ -0.54
AL359853.3-201ENST00000423879 DCAF8L2P0C7V8 631 aa11.67□□□□□ -0.54
AL359853.3-201ENST00000423879 PABPN1Q86U42 306 aaKnown RBP eCLIP11.65□□□□□ -0.54
AL359853.3-201ENST00000423879 HOXD11P31277 338 aaPredicted RBP11.61□□□□□ -0.55
AL359853.3-201ENST00000423879 NACADO15069 1562 aa11.59□□□□□ -0.55
AL359853.3-201ENST00000423879 EHMT2Q96KQ7 1210 aa11.53□□□□□ -0.56
AL359853.3-201ENST00000423879 BICRAQ9NZM4 1560 aa11.45□□□□□ -0.58
AL359853.3-201ENST00000423879 CSRNP3Q8WYN3 585 aa11.36□□□□□ -0.59
AL359853.3-201ENST00000423879 CC2D2AQ9P2K1 1620 aa11.33□□□□□ -0.6
AL359853.3-201ENST00000423879 CECR2Q9BXF3 1484 aa11.29□□□□□ -0.6
AL359853.3-201ENST00000423879 FOXD4L1Q9NU39 408 aa11.26□□□□□ -0.61
AL359853.3-201ENST00000423879 SCRIBQ14160 1630 aa11.24□□□□□ -0.61
AL359853.3-201ENST00000423879 ZBTB22O15209 634 aa11.22□□□□□ -0.61
AL359853.3-201ENST00000423879 MYO15BQ96JP2 1530 aa11.22□□□□□ -0.61
AL359853.3-201ENST00000423879 EIF4G1Q04637 1599 aaKnown RBP11.2□□□□□ -0.62
AL359853.3-201ENST00000423879 DCAF8L1A6NGE4 600 aa11.15□□□□□ -0.62
AL359853.3-201ENST00000423879 SLC4A2P04920 1241 aa11.15□□□□□ -0.62
AL359853.3-201ENST00000423879 DNAJC5Q9H3Z4 198 aa11.14□□□□□ -0.63
AL359853.3-201ENST00000423879 SHROOM4Q9ULL8 1493 aa11.11□□□□□ -0.63
AL359853.3-201ENST00000423879 ZCCHC6Q5VYS8 1495 aaKnown RBP11.08□□□□□ -0.64
AL359853.3-201ENST00000423879 MYCNP04198 464 aaPredicted RBP11.02□□□□□ -0.65
AL359853.3-201ENST00000423879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.02□□□□□ -0.65
AL359853.3-201ENST00000423879 DCAF1Q9Y4B6 1507 aa11.01□□□□□ -0.65
AL359853.3-201ENST00000423879 POTEDQ86YR6 584 aa10.96□□□□□ -0.65
AL359853.3-201ENST00000423879 ATXN8OSP0DMR3 200 aa10.93□□□□□ -0.66
AL359853.3-201ENST00000423879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.9□□□□□ -0.66
AL359853.3-201ENST00000423879 HNRNPUL2Q1KMD3 747 aaKnown RBP10.9□□□□□ -0.66
AL359853.3-201ENST00000423879 ERCC6Q03468 1493 aa10.86□□□□□ -0.67
AL359853.3-201ENST00000423879 U3KPZ7 1027 aaPredicted RBP10.85□□□□□ -0.67
AL359853.3-201ENST00000423879 SAMD1Q6SPF0 538 aaPredicted RBP10.84□□□□□ -0.67
AL359853.3-201ENST00000423879 CUX2O14529 1486 aa10.83□□□□□ -0.68
AL359853.3-201ENST00000423879 APLP2Q06481 763 aa10.76□□□□□ -0.69
AL359853.3-201ENST00000423879 NESP48681 1621 aa10.71□□□□□ -0.69
AL359853.3-201ENST00000423879 TRIM41Q8WV44 630 aa10.7□□□□□ -0.7
AL359853.3-201ENST00000423879 RNF39Q9H2S5 420 aa10.7□□□□□ -0.7
AL359853.3-201ENST00000423879 KIF21AQ7Z4S6 1674 aa10.66□□□□□ -0.7
AL359853.3-201ENST00000423879 NCAPD3P42695 1498 aa10.65□□□□□ -0.7
AL359853.3-201ENST00000423879 THOC2Q8NI27 1593 aaKnown RBP10.64□□□□□ -0.71
AL359853.3-201ENST00000423879 ATAD2BQ9ULI0 1458 aa10.63□□□□□ -0.71
AL359853.3-201ENST00000423879 C1QBPQ07021 282 aaKnown RBP10.63□□□□□ -0.71
AL359853.3-201ENST00000423879 SMARCA2P51531 1590 aa10.63□□□□□ -0.71
AL359853.3-201ENST00000423879 SMARCA4P51532 1647 aa10.62□□□□□ -0.71
AL359853.3-201ENST00000423879 ATF5Q9Y2D1 282 aaPredicted RBP10.6□□□□□ -0.71
AL359853.3-201ENST00000423879 HMGXB3Q12766 1538 aa10.58□□□□□ -0.72
AL359853.3-201ENST00000423879 BAZ1BQ9UIG0 1483 aaKnown RBP10.55□□□□□ -0.72
AL359853.3-201ENST00000423879 LAMC3Q9Y6N6 1575 aa10.54□□□□□ -0.72
AL359853.3-201ENST00000423879 ZNF219Q9P2Y4 722 aaPredicted RBP10.52□□□□□ -0.73
AL359853.3-201ENST00000423879 BAZ1AQ9NRL2 1556 aaPredicted RBP10.48□□□□□ -0.73
AL359853.3-201ENST00000423879 PDS5BQ9NTI5 1447 aa10.45□□□□□ -0.74
AL359853.3-201ENST00000423879 SPINK5Q9NQ38 1064 aaPredicted RBP10.45□□□□□ -0.74
AL359853.3-201ENST00000423879 CAPN15O75808 1086 aa10.43□□□□□ -0.74
AL359853.3-201ENST00000423879 MROH2BQ7Z745 1585 aa10.42□□□□□ -0.74
AL359853.3-201ENST00000423879 PEG3Q9GZU2 1588 aa10.42□□□□□ -0.74
AL359853.3-201ENST00000423879 TRHP20396 242 aaPredicted RBP10.41□□□□□ -0.74
AL359853.3-201ENST00000423879 MRC2Q9UBG0 1479 aa10.4□□□□□ -0.74
AL359853.3-201ENST00000423879 WDR62O43379 1518 aa10.38□□□□□ -0.75
AL359853.3-201ENST00000423879 WIZO95785 1651 aa10.38□□□□□ -0.75
AL359853.3-201ENST00000423879 CADPSQ9ULU8 1353 aa10.35□□□□□ -0.75
AL359853.3-201ENST00000423879 OSCARQ8IYS5 282 aa10.33□□□□□ -0.76
AL359853.3-201ENST00000423879 CEP164Q9UPV0 1460 aa10.32□□□□□ -0.76
AL359853.3-201ENST00000423879 RIMBP3CA6NJZ7 1639 aa10.32□□□□□ -0.76
AL359853.3-201ENST00000423879 RIMBP3BA6NNM3 1639 aa10.32□□□□□ -0.76
AL359853.3-201ENST00000423879 RIMBP3Q9UFD9 1639 aa10.32□□□□□ -0.76
AL359853.3-201ENST00000423879 POLA2Q14181 598 aa10.31□□□□□ -0.76
AL359853.3-201ENST00000423879 FANCD2Q9BXW9 1451 aa10.29□□□□□ -0.76
AL359853.3-201ENST00000423879 ZBTB12Q9Y330 459 aaPredicted RBP10.27□□□□□ -0.77
AL359853.3-201ENST00000423879 FBLN2P98095 1184 aa10.26□□□□□ -0.77
AL359853.3-201ENST00000423879 PRDM2Q13029 1718 aa10.26□□□□□ -0.77
AL359853.3-201ENST00000423879 CACNB1Q02641 598 aaPredicted RBP10.25□□□□□ -0.77
AL359853.3-201ENST00000423879 FKBP8Q14318 412 aa10.25□□□□□ -0.77
AL359853.3-201ENST00000423879 DSG3P32926 999 aa10.23□□□□□ -0.77
AL359853.3-201ENST00000423879 URB2Q14146 1524 aaKnown RBP10.22□□□□□ -0.77
AL359853.3-201ENST00000423879 CHD1O14646 1710 aa10.2□□□□□ -0.78
AL359853.3-201ENST00000423879 ABCB7O75027 752 aa10.2□□□□□ -0.78
AL359853.3-201ENST00000423879 ARHGEF11O15085 1522 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms